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The map label for this gene is yeaJ [C]

Identifier: 222526308

GI number: 222526308

Start: 3792901

End: 3793662

Strand: Direct

Name: yeaJ [C]

Synonym: Chy400_3074

Alternate gene names: 222526308

Gene position: 3792901-3793662 (Clockwise)

Preceding gene: 222526307

Following gene: 222526309

Centisome position: 71.99

GC content: 51.97

Gene sequence:

>762_bases
ATGACAACACGAACTGAGTCATTGCTGGTTCGTTTACTCCTCTTACACGAAGCAGCAACCGGCTACACTAACCTCAGCTT
TGCCGAAGTTCTTGAGCATGCTCGCCGTTGGGTGAGCTGGATATTTGAGCGCGGCCATCTTGAGGTTATCGATCCCTCCT
CTACGGTGATTGAGCAGAAGTTTCCAGTTCGTGGCCGGGTACCGGGAGGGTATGGGATTAGCTTTTCTGGCCCGCCGTAC
CCGGTTTATGTTCGGCTGGTATTGCCTGATATTGATGATCCGGATGAGTTGCGGATGGCAGCTCTCTATTGTGATTATCT
GTTTGCTGCACTCCAGGCTGCCGGCTATCGAGAAGAACTTGATCGTCAGGCTCGTTACGATTGGTTAACCGGTTTAGGGA
ATCGGCGTGCACTTGAGCGACGGTTAAAAGGGGGATTGCCTGCAGATTGGGGTGTAGCGTTTCTCGACCTTGATAATCTG
AAAAGGGTAAATGATACTCAGGGTCATCTGGCCGGCGACCAGTTGCTCCAGCGTTTCGCCGACGCGCTTCGGCAGGCGGC
GTTTGAAGCGTTTCGGCTGGGTGGGGATGAGTTTGTTGTTCTGTTGACCAGACAGCAGCAAGCAGCATTGCTGGAAGCAA
TAAGCCATTTTCAAGTTAGCTACGGTTTCGCCTGGGCCGATGAAGACAATTGCACAAATTTGCTGCAACGAGCCGATCAA
CGCATGTACGCCCAAAAACAACACAAAAAGACCGGTCGCTAA

Upstream 100 bases:

>100_bases
GGTTGAGTGAGGTAGAGATACAGGAAGCGGTTGCCGTGGTGGGGGTCTTTACATTAATCAACAATTGGACAGATATGCTG
GAAATCCCTGTTGACCCACT

Downstream 100 bases:

>100_bases
CTTTCTAATAATATGCGGTACAATACGTATGCCAATCGAATCGTTATCGTTGATCGTCCGACCCGGTCGGCGATCACTGG
AAGGCGAGAACGCCAATGGC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTTRTESLLVRLLLLHEAATGYTNLSFAEVLEHARRWVSWIFERGHLEVIDPSSTVIEQKFPVRGRVPGGYGISFSGPPY
PVYVRLVLPDIDDPDELRMAALYCDYLFAALQAAGYREELDRQARYDWLTGLGNRRALERRLKGGLPADWGVAFLDLDNL
KRVNDTQGHLAGDQLLQRFADALRQAAFEAFRLGGDEFVVLLTRQQQAALLEAISHFQVSYGFAWADEDNCTNLLQRADQ
RMYAQKQHKKTGR

Sequences:

>Translated_253_residues
MTTRTESLLVRLLLLHEAATGYTNLSFAEVLEHARRWVSWIFERGHLEVIDPSSTVIEQKFPVRGRVPGGYGISFSGPPY
PVYVRLVLPDIDDPDELRMAALYCDYLFAALQAAGYREELDRQARYDWLTGLGNRRALERRLKGGLPADWGVAFLDLDNL
KRVNDTQGHLAGDQLLQRFADALRQAAFEAFRLGGDEFVVLLTRQQQAALLEAISHFQVSYGFAWADEDNCTNLLQRADQ
RMYAQKQHKKTGR
>Mature_252_residues
TTRTESLLVRLLLLHEAATGYTNLSFAEVLEHARRWVSWIFERGHLEVIDPSSTVIEQKFPVRGRVPGGYGISFSGPPYP
VYVRLVLPDIDDPDELRMAALYCDYLFAALQAAGYREELDRQARYDWLTGLGNRRALERRLKGGLPADWGVAFLDLDNLK
RVNDTQGHLAGDQLLQRFADALRQAAFEAFRLGGDEFVVLLTRQQQAALLEAISHFQVSYGFAWADEDNCTNLLQRADQR
MYAQKQHKKTGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87081974, Length=157, Percent_Identity=34.3949044585987, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1787056, Length=148, Percent_Identity=33.7837837837838, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1787541, Length=158, Percent_Identity=34.8101265822785, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081881, Length=155, Percent_Identity=30.9677419354839, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003018 [H]

Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 28802; Mature: 28671

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRTESLLVRLLLLHEAATGYTNLSFAEVLEHARRWVSWIFERGHLEVIDPSSTVIEQK
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHCC
FPVRGRVPGGYGISFSGPPYPVYVRLVLPDIDDPDELRMAALYCDYLFAALQAAGYREEL
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
DRQARYDWLTGLGNRRALERRLKGGLPADWGVAFLDLDNLKRVNDTQGHLAGDQLLQRFA
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHH
DALRQAAFEAFRLGGDEFVVLLTRQQQAALLEAISHFQVSYGFAWADEDNCTNLLQRADQ
HHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHH
RMYAQKQHKKTGR
HHHHHHHHHCCCC
>Mature Secondary Structure 
TTRTESLLVRLLLLHEAATGYTNLSFAEVLEHARRWVSWIFERGHLEVIDPSSTVIEQK
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHCC
FPVRGRVPGGYGISFSGPPYPVYVRLVLPDIDDPDELRMAALYCDYLFAALQAAGYREEL
CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
DRQARYDWLTGLGNRRALERRLKGGLPADWGVAFLDLDNLKRVNDTQGHLAGDQLLQRFA
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHH
DALRQAAFEAFRLGGDEFVVLLTRQQQAALLEAISHFQVSYGFAWADEDNCTNLLQRADQ
HHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHH
RMYAQKQHKKTGR
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]