| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526287
Identifier: 222526287
GI number: 222526287
Start: 3766045
End: 3767130
Strand: Reverse
Name: 222526287
Synonym: Chy400_3053
Alternate gene names: NA
Gene position: 3767130-3766045 (Counterclockwise)
Preceding gene: 222526290
Following gene: 222526281
Centisome position: 71.5
GC content: 59.94
Gene sequence:
>1086_bases GTGCGTTTACTTAATACCTTTTTACGGCTGATTACACTCGGTAACGCAGTTGCCCATCTCAGTGGTCTGCGAGGGTTGAG CTGGAGCAACCGATTGGCATTACCGTTTCTGACCCTGGCCTGGAGCCAGCCGGCTTCGGGATGGCGCAGCCATCTGGCCC TGCTATTACCGGCATTCATTGGTCAGATAGGGCTGGCCACGCTCCGGCGACGGCAACTTGATCCAAAACAACAGTTACGG CCAGGACGTTACCCGGATCGCCAGATTGTACGCCTCGATTTACCCGCCCGCCATGGGCCGGTACCGGCACTGCACATCGT ACCACACGGTGGGTCAAAGACTGCGGTGCTGGTCACCCATGGTTCAGGCTGCGATAAGACCTTTTACGCCTGGCGCCTGG TGGATAGACTGATTGCGCACGGCGCTGCCGCGCTCTTGATCGATCTCGACGGTCACGGCGAGAGTCCACGGCCCCAGGCG TTTCCACACATGGTTGACAGTGTTGCCGATCCGATTGACTGGCTGCGCCAGCGCTACACTCAGGTTGGAGCTATTGGAAT GAGCCTCGGCGGCGCAGTGCTGGCCCGGGCAGTTGCGAACGGCGCCCGCGTGGATGCGCTGGCGCTCTGGGAAGTACCAC CACGGTTACGACTCGATGCACGGGCATACCGGCAGGTGCAAATCCGTGAAGCACTGGCAATTCTGCAATTGCGCATGCTA CACCTCTTCCGCGATGGTGCTGTTGATCATGTGATCAGAGCGTGGCAAACCAGTGGGATTCGGGCCACGATCAGTACCTG GGATTTATTCGATGCCCTGGCCTTTCCCGACAGCCTGCGCACGCTGGCCCGGCGAGAGCCACCATTACCGACCCTGCTGG TCTATGCCGGACGCGACGCGATTGTACCGCCGGCCGCAGCAGCCGAAGTTGCAGCGCTGGCAGCCGGCTGGGCTGAGTAT CATCTCTTGCCGTTCGCCAGTCATATCTCGCTCCCGATAGACCTGGAATGCATTACGCTCACGGTTGACTGGCTCGCGCG ACACCTAAACCAACCTGCCTTCACGACCGGTTTGGTGTCAGAATAG
Upstream 100 bases:
>100_bases CAATCGATTGAGCGTCAGGCCCACTCAGACGTATAATACCAATGCCACCTTCTCCGGGTGGTGTGGCAATTGCAGCAATT GTGTCATTCATCGAGGTTCT
Downstream 100 bases:
>100_bases CATCGATCAATCCGTACTCCAGCGCCTGTGGTGCGGTCATATAGAAATCACGACTAAAATCGGCTTCAAGGCGCTCGACG GGTTGCCCGGAATGTTTAGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold-Domain Containing Protein
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MRLLNTFLRLITLGNAVAHLSGLRGLSWSNRLALPFLTLAWSQPASGWRSHLALLLPAFIGQIGLATLRRRQLDPKQQLR PGRYPDRQIVRLDLPARHGPVPALHIVPHGGSKTAVLVTHGSGCDKTFYAWRLVDRLIAHGAAALLIDLDGHGESPRPQA FPHMVDSVADPIDWLRQRYTQVGAIGMSLGGAVLARAVANGARVDALALWEVPPRLRLDARAYRQVQIREALAILQLRML HLFRDGAVDHVIRAWQTSGIRATISTWDLFDALAFPDSLRTLARREPPLPTLLVYAGRDAIVPPAAAAEVAALAAGWAEY HLLPFASHISLPIDLECITLTVDWLARHLNQPAFTTGLVSE
Sequences:
>Translated_361_residues MRLLNTFLRLITLGNAVAHLSGLRGLSWSNRLALPFLTLAWSQPASGWRSHLALLLPAFIGQIGLATLRRRQLDPKQQLR PGRYPDRQIVRLDLPARHGPVPALHIVPHGGSKTAVLVTHGSGCDKTFYAWRLVDRLIAHGAAALLIDLDGHGESPRPQA FPHMVDSVADPIDWLRQRYTQVGAIGMSLGGAVLARAVANGARVDALALWEVPPRLRLDARAYRQVQIREALAILQLRML HLFRDGAVDHVIRAWQTSGIRATISTWDLFDALAFPDSLRTLARREPPLPTLLVYAGRDAIVPPAAAAEVAALAAGWAEY HLLPFASHISLPIDLECITLTVDWLARHLNQPAFTTGLVSE >Mature_361_residues MRLLNTFLRLITLGNAVAHLSGLRGLSWSNRLALPFLTLAWSQPASGWRSHLALLLPAFIGQIGLATLRRRQLDPKQQLR PGRYPDRQIVRLDLPARHGPVPALHIVPHGGSKTAVLVTHGSGCDKTFYAWRLVDRLIAHGAAALLIDLDGHGESPRPQA FPHMVDSVADPIDWLRQRYTQVGAIGMSLGGAVLARAVANGARVDALALWEVPPRLRLDARAYRQVQIREALAILQLRML HLFRDGAVDHVIRAWQTSGIRATISTWDLFDALAFPDSLRTLARREPPLPTLLVYAGRDAIVPPAAAAEVAALAAGWAEY HLLPFASHISLPIDLECITLTVDWLARHLNQPAFTTGLVSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39652; Mature: 39652
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLNTFLRLITLGNAVAHLSGLRGLSWSNRLALPFLTLAWSQPASGWRSHLALLLPAFI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHH GQIGLATLRRRQLDPKQQLRPGRYPDRQIVRLDLPARHGPVPALHIVPHGGSKTAVLVTH HHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEE GSGCDKTFYAWRLVDRLIAHGAAALLIDLDGHGESPRPQAFPHMVDSVADPIDWLRQRYT CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH QVGAIGMSLGGAVLARAVANGARVDALALWEVPPRLRLDARAYRQVQIREALAILQLRML HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHH HLFRDGAVDHVIRAWQTSGIRATISTWDLFDALAFPDSLRTLARREPPLPTLLVYAGRDA HHHHCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCC IVPPAAAAEVAALAAGWAEYHLLPFASHISLPIDLECITLTVDWLARHLNQPAFTTGLVS CCCCHHHHHHHHHHHHHHHHHHEEHHHHCCCCEEEEEEEEEHHHHHHHCCCCCCCCCCCC E C >Mature Secondary Structure MRLLNTFLRLITLGNAVAHLSGLRGLSWSNRLALPFLTLAWSQPASGWRSHLALLLPAFI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHH GQIGLATLRRRQLDPKQQLRPGRYPDRQIVRLDLPARHGPVPALHIVPHGGSKTAVLVTH HHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEE GSGCDKTFYAWRLVDRLIAHGAAALLIDLDGHGESPRPQAFPHMVDSVADPIDWLRQRYT CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH QVGAIGMSLGGAVLARAVANGARVDALALWEVPPRLRLDARAYRQVQIREALAILQLRML HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHH HLFRDGAVDHVIRAWQTSGIRATISTWDLFDALAFPDSLRTLARREPPLPTLLVYAGRDA HHHHCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCC IVPPAAAAEVAALAAGWAEYHLLPFASHISLPIDLECITLTVDWLARHLNQPAFTTGLVS CCCCHHHHHHHHHHHHHHHHHHEEHHHHCCCCEEEEEEEEEHHHHHHHCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA