| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526272
Identifier: 222526272
GI number: 222526272
Start: 3748173
End: 3748685
Strand: Direct
Name: 222526272
Synonym: Chy400_3038
Alternate gene names: NA
Gene position: 3748173-3748685 (Clockwise)
Preceding gene: 222526270
Following gene: 222526273
Centisome position: 71.14
GC content: 66.67
Gene sequence:
>513_bases GTGGCGTGCTCCCCTTCCTTCGCCGCGAGCTGGGAGTGCGCGCCTCCGGTGCGCAGGTACCGGTACCATTCCCGCACGCG CCAGTTGTGCACGTGCTCGCCGGATGGTAGGTCCTCCGTTTGGGCTGGGGAGTGCCTTAGCGGCTGTGCCTGCCTGAACA TCGCCGCAGGTACCGCCCGGCTCCCTGCACTGGTGGTGGCACCCCGCAGAGCATGGAACGTCGCGGCAAGCATTGGTGGC GTGGGGGCTTACCTCATCCCCCCAGCCTCCGCTCCGCTCCCGTTGCAGGCTATGCATTACCCACAACTGGTGCCAACCAC GTGCGTATCAGCGGGGATGATCGCCATAAGTGCTGTTGTGGGCGACTGGCTCGGTGGCAGTGCGCCGCTCCAGCCGTGTC AGCATGTGCTGGATGAATTGCCGTACCCGCTCGTTATGCGCGTGTCGCGCGGTGTGGAGTGCGGCAGCCATGCTGCCGCG CCAGCCGTGCTCACGATCCGGCGCGGATTGTAG
Upstream 100 bases:
>100_bases TTGGCTCAGTGTGGGGCATACATTGCTCCTCTTCATTTATTGTGCGGGGCCGAATCTATTATAGCATTCCTCCGCTCTGC TCTCATCGGGAGAGTGGGGA
Downstream 100 bases:
>100_bases CGGACTCTCGTGCCGGTACGTGACTCTGATGAGGGGGATGGCTGAACGCAGGCCGGCAGCCTGCCCCACAGCGTGCTCGT ACCGGTGGTGCATAGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MACSPSFAASWECAPPVRRYRYHSRTRQLCTCSPDGRSSVWAGECLSGCACLNIAAGTARLPALVVAPRRAWNVAASIGG VGAYLIPPASAPLPLQAMHYPQLVPTTCVSAGMIAISAVVGDWLGGSAPLQPCQHVLDELPYPLVMRVSRGVECGSHAAA PAVLTIRRGL
Sequences:
>Translated_170_residues MACSPSFAASWECAPPVRRYRYHSRTRQLCTCSPDGRSSVWAGECLSGCACLNIAAGTARLPALVVAPRRAWNVAASIGG VGAYLIPPASAPLPLQAMHYPQLVPTTCVSAGMIAISAVVGDWLGGSAPLQPCQHVLDELPYPLVMRVSRGVECGSHAAA PAVLTIRRGL >Mature_169_residues ACSPSFAASWECAPPVRRYRYHSRTRQLCTCSPDGRSSVWAGECLSGCACLNIAAGTARLPALVVAPRRAWNVAASIGGV GAYLIPPASAPLPLQAMHYPQLVPTTCVSAGMIAISAVVGDWLGGSAPLQPCQHVLDELPYPLVMRVSRGVECGSHAAAP AVLTIRRGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17779; Mature: 17648
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACSPSFAASWECAPPVRRYRYHSRTRQLCTCSPDGRSSVWAGECLSGCACLNIAAGTAR CCCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHCCHHHHHCCCCCCC LPALVVAPRRAWNVAASIGGVGAYLIPPASAPLPLQAMHYPQLVPTTCVSAGMIAISAVV CCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH GDWLGGSAPLQPCQHVLDELPYPLVMRVSRGVECGSHAAAPAVLTIRRGL HHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure ACSPSFAASWECAPPVRRYRYHSRTRQLCTCSPDGRSSVWAGECLSGCACLNIAAGTAR CCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHCCHHHHHCCCCCCC LPALVVAPRRAWNVAASIGGVGAYLIPPASAPLPLQAMHYPQLVPTTCVSAGMIAISAVV CCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH GDWLGGSAPLQPCQHVLDELPYPLVMRVSRGVECGSHAAAPAVLTIRRGL HHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA