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The map label for this gene is yidE [C]

Identifier: 222526262

GI number: 222526262

Start: 3735708

End: 3737330

Strand: Reverse

Name: yidE [C]

Synonym: Chy400_3028

Alternate gene names: 222526262

Gene position: 3737330-3735708 (Counterclockwise)

Preceding gene: 222526266

Following gene: 222526260

Centisome position: 70.93

GC content: 59.21

Gene sequence:

>1623_bases
ATGATCGATATATTAGCCAACAACCCCCTCCTGCTACTCTTTACAGTATCGGCAATCGGCTACCTGATCGGCAGGATCAA
CATCGGTGGAATCAGTCTTGGAGTAGCAGCCGTACTCTTCGTTGGGCTGGCCTTTGGCGCACTCGATCAACGACTGCGGC
TGCCCGACATCATCTACCTGCTCGGTCTGGTCATCTTCGTCTACACGATTGGCCTGAGCAGCGGCCCCGGTTTTATCGCA
TCCTTTCGCCGACGCGGGCTACGTAACAACCTGTTTGTGGGTGGAGTCATCGTCGTTGCCGCCGGTATTGCTGTCGTGCT
GCGCATGATCCTGGGTCTCAACAGCGCGCAAACCGCCGGTCTCTTCGCCGGCAGTCTGACCAACACCCCAGCCCTGGCGG
CGGTCATCGAGCAGTTGAGTCAACGAGGCGCAGATGAAGTGCTCCGTACCGAACCGGTGGTCGGCTACTCGGTGGCTTAC
CCGGTTGGTGTACTCGGCATGATCCTTGCCATCTACCTGACGCGCCGGCTCTGGCGGATCGATCTGGCGCAGGAAAGCCA
GCAGCTTCGCGAATTCGGGGCAGTTGGCGAGCACCTGATCAACTGCACTATTCGCGTGACCAACGCCAATGTGGACGGGC
AAAGCATTGCCGAACTGGTCAGAGCTAATGGCTGGAACGTCATCTTCAGCCGACGCCAACATGATGGCCGGATCGAGCTG
GCTACCGGAGCAGCCCGGCTCAATACCGGTGACCTGATCAGTGTCGTTGGCTCGCCGGAAGCCGTGGCCCAGGTCACGGC
TGTACTTGGTGAGCCAACCGACGAGCAACTCATGCTCGACCGTCATACCCTCGACTTCCGGCGTATCTTCGTCTCCAATC
CGGCGGTTATTGGAGTGCCACTGCGCATGCTCAACCTGCCCTCCACCCTCGGAGCGGTCATCACCCGCATTCGCCGTGGT
GATGTTGAACTCTTACCGCACGGCGATACAGTGCTTGAACCCGGTGATCGGGTGCGTGTTGTCACCCAACGCGACAATAT
GGATCGGGTCAGCGCCTTCTTCGGCGACTCCTACCGTTCGCTGGCCGAAATTGACGTAGTTTCGCTGGGTTTGGGTACTG
CACTCGGCATGCTGGTGGGACTGATCCCTATTCCGCTACCCGGTGGGGGAAGTTTCTCGCTTGGCCTGGCCGGTGGCCCG
CTGATTGTCGCCCTCATCCTCGGCTGGCGTGGCCGCACCGGGCCGATTATCTGGAGCCTGCCGTACAGCGCCAATCTCAC
ATTACGCCAGGTTGGCATGACCCTCTTCCTGGCCGGCATTGGCACCCGTGCCGGCTACAGCTTCTTCACCACCATCACCC
AGGGCAATGGCCTGTTCCTCTTCATCGGAGGTGCGCTGATCACGATACCGGTTGCCATACTAACCCTCTTTATCGGTTAT
AAACTGCTCAAGATACCGTTCAGCCTGCTGATCGGGATGCTGGCCGGTCTCCAGACCCAACCGGCAGTGCTGGCGTTCGC
CAATGAGCAGGCCGGCAACGAAGCACCTAATATCGGCTACGCGATGGTCTTCCCGACAGCCATGGTTGTGAAGATCATTC
TGGCCCAGATTCTGCTTGGATGA

Upstream 100 bases:

>100_bases
AGTAATCATACGATCCCTCTTTCTTAACCGTGGGTTGCCTCTTGCATGATACCATACACGGCGGATAACAACGACATGAT
ACGAGAGGATGAACACCATC

Downstream 100 bases:

>100_bases
AGGTGACGGGATACCTGCGCCACGGTTGTTTTGGATGCACCACCGAGGCACGGCGGGCACAGAGAGTTTCATGTGAACCT
TCGCTGTGTTTTCCAGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MIDILANNPLLLLFTVSAIGYLIGRINIGGISLGVAAVLFVGLAFGALDQRLRLPDIIYLLGLVIFVYTIGLSSGPGFIA
SFRRRGLRNNLFVGGVIVVAAGIAVVLRMILGLNSAQTAGLFAGSLTNTPALAAVIEQLSQRGADEVLRTEPVVGYSVAY
PVGVLGMILAIYLTRRLWRIDLAQESQQLREFGAVGEHLINCTIRVTNANVDGQSIAELVRANGWNVIFSRRQHDGRIEL
ATGAARLNTGDLISVVGSPEAVAQVTAVLGEPTDEQLMLDRHTLDFRRIFVSNPAVIGVPLRMLNLPSTLGAVITRIRRG
DVELLPHGDTVLEPGDRVRVVTQRDNMDRVSAFFGDSYRSLAEIDVVSLGLGTALGMLVGLIPIPLPGGGSFSLGLAGGP
LIVALILGWRGRTGPIIWSLPYSANLTLRQVGMTLFLAGIGTRAGYSFFTTITQGNGLFLFIGGALITIPVAILTLFIGY
KLLKIPFSLLIGMLAGLQTQPAVLAFANEQAGNEAPNIGYAMVFPTAMVVKIILAQILLG

Sequences:

>Translated_540_residues
MIDILANNPLLLLFTVSAIGYLIGRINIGGISLGVAAVLFVGLAFGALDQRLRLPDIIYLLGLVIFVYTIGLSSGPGFIA
SFRRRGLRNNLFVGGVIVVAAGIAVVLRMILGLNSAQTAGLFAGSLTNTPALAAVIEQLSQRGADEVLRTEPVVGYSVAY
PVGVLGMILAIYLTRRLWRIDLAQESQQLREFGAVGEHLINCTIRVTNANVDGQSIAELVRANGWNVIFSRRQHDGRIEL
ATGAARLNTGDLISVVGSPEAVAQVTAVLGEPTDEQLMLDRHTLDFRRIFVSNPAVIGVPLRMLNLPSTLGAVITRIRRG
DVELLPHGDTVLEPGDRVRVVTQRDNMDRVSAFFGDSYRSLAEIDVVSLGLGTALGMLVGLIPIPLPGGGSFSLGLAGGP
LIVALILGWRGRTGPIIWSLPYSANLTLRQVGMTLFLAGIGTRAGYSFFTTITQGNGLFLFIGGALITIPVAILTLFIGY
KLLKIPFSLLIGMLAGLQTQPAVLAFANEQAGNEAPNIGYAMVFPTAMVVKIILAQILLG
>Mature_540_residues
MIDILANNPLLLLFTVSAIGYLIGRINIGGISLGVAAVLFVGLAFGALDQRLRLPDIIYLLGLVIFVYTIGLSSGPGFIA
SFRRRGLRNNLFVGGVIVVAAGIAVVLRMILGLNSAQTAGLFAGSLTNTPALAAVIEQLSQRGADEVLRTEPVVGYSVAY
PVGVLGMILAIYLTRRLWRIDLAQESQQLREFGAVGEHLINCTIRVTNANVDGQSIAELVRANGWNVIFSRRQHDGRIEL
ATGAARLNTGDLISVVGSPEAVAQVTAVLGEPTDEQLMLDRHTLDFRRIFVSNPAVIGVPLRMLNLPSTLGAVITRIRRG
DVELLPHGDTVLEPGDRVRVVTQRDNMDRVSAFFGDSYRSLAEIDVVSLGLGTALGMLVGLIPIPLPGGGSFSLGLAGGP
LIVALILGWRGRTGPIIWSLPYSANLTLRQVGMTLFLAGIGTRAGYSFFTTITQGNGLFLFIGGALITIPVAILTLFIGY
KLLKIPFSLLIGMLAGLQTQPAVLAFANEQAGNEAPNIGYAMVFPTAMVVKIILAQILLG

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=486, Percent_Identity=34.7736625514403, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1787071, Length=550, Percent_Identity=27.0909090909091, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 57393; Mature: 57393

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDILANNPLLLLFTVSAIGYLIGRINIGGISLGVAAVLFVGLAFGALDQRLRLPDIIYL
CEEEECCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGLVIFVYTIGLSSGPGFIASFRRRGLRNNLFVGGVIVVAAGIAVVLRMILGLNSAQTAG
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LFAGSLTNTPALAAVIEQLSQRGADEVLRTEPVVGYSVAYPVGVLGMILAIYLTRRLWRI
EEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
DLAQESQQLREFGAVGEHLINCTIRVTNANVDGQSIAELVRANGWNVIFSRRQHDGRIEL
HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCEEEE
ATGAARLNTGDLISVVGSPEAVAQVTAVLGEPTDEQLMLDRHTLDFRRIFVSNPAVIGVP
EECCEECCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCEEECC
LRMLNLPSTLGAVITRIRRGDVELLPHGDTVLEPGDRVRVVTQRDNMDRVSAFFGDSYRS
HHHHCCCHHHHHHHHHHHCCCEEEECCCCCEECCCCCEEEEEECCCHHHHHHHHCCHHHH
LAEIDVVSLGLGTALGMLVGLIPIPLPGGGSFSLGLAGGPLIVALILGWRGRTGPIIWSL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEC
PYSANLTLRQVGMTLFLAGIGTRAGYSFFTTITQGNGLFLFIGGALITIPVAILTLFIGY
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHH
KLLKIPFSLLIGMLAGLQTQPAVLAFANEQAGNEAPNIGYAMVFPTAMVVKIILAQILLG
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDILANNPLLLLFTVSAIGYLIGRINIGGISLGVAAVLFVGLAFGALDQRLRLPDIIYL
CEEEECCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LGLVIFVYTIGLSSGPGFIASFRRRGLRNNLFVGGVIVVAAGIAVVLRMILGLNSAQTAG
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LFAGSLTNTPALAAVIEQLSQRGADEVLRTEPVVGYSVAYPVGVLGMILAIYLTRRLWRI
EEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
DLAQESQQLREFGAVGEHLINCTIRVTNANVDGQSIAELVRANGWNVIFSRRQHDGRIEL
HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCEEEE
ATGAARLNTGDLISVVGSPEAVAQVTAVLGEPTDEQLMLDRHTLDFRRIFVSNPAVIGVP
EECCEECCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCEEECC
LRMLNLPSTLGAVITRIRRGDVELLPHGDTVLEPGDRVRVVTQRDNMDRVSAFFGDSYRS
HHHHCCCHHHHHHHHHHHCCCEEEECCCCCEECCCCCEEEEEECCCHHHHHHHHCCHHHH
LAEIDVVSLGLGTALGMLVGLIPIPLPGGGSFSLGLAGGPLIVALILGWRGRTGPIIWSL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEC
PYSANLTLRQVGMTLFLAGIGTRAGYSFFTTITQGNGLFLFIGGALITIPVAILTLFIGY
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHH
KLLKIPFSLLIGMLAGLQTQPAVLAFANEQAGNEAPNIGYAMVFPTAMVVKIILAQILLG
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA