Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526237

Identifier: 222526237

GI number: 222526237

Start: 3702219

End: 3703088

Strand: Reverse

Name: 222526237

Synonym: Chy400_3000

Alternate gene names: NA

Gene position: 3703088-3702219 (Counterclockwise)

Preceding gene: 222526238

Following gene: 222526236

Centisome position: 70.28

GC content: 60.0

Gene sequence:

>870_bases
ATGACCAGCAATGGCGCTACAACCACGGCTCATGCCGACCGTCCGTTAAACGCGCATGCGTTGCTCGAACGACTAAACGA
ACCGCAGACGGCTGCCGCCTTGCACCGGCTGCTCGACCACGCCGAACTGCTGGCTTTTTCGGTCGGCGCAGTGGATAGCC
TCTTACAACGGGGTGACGTTATCGCCGACAACGTCGCTGCTAGCGTTCACGAATTGCGTGCCGCTCTCCCCGACGATGGT
GGCGCTCTGGCTGCCCAACTAATGCGACTGTCGCGGACGCTCCCGCAACTGACTACGACTGTTGAGCAGTTGGCAACATT
GACGGCCCAGCCGGCATTTCAGCGCCTGCTCGCAACCTTAAGCAAACCCGACACGCTGGCCGCGCTTGATCGTCTGCTGG
CGCAGAGCGAACTACTCGCCTTCCTGGTCAGTGCGCTCGATCACCTGCTGGCGCGCGGTGATGAGCTGACCGAAAATATC
CGCCTGGCGGTCGAAGAGCTGCGCACAACAATGAATGACCGCACGATCACGGCTGATAAGCTGATCGATGCCTTCATCGC
GTTCCTACCCTACTTCCCCCGCCTGGTTGCCGTCGCTCCCAACTTCATCGAGGTGATCGAGCGAATCGAGCCATTTATCG
CCTCGGCAGAGTTCGACGCACTGCTCGATTCGGGTGTGTTCCATCCCGATACGGTACAGCTGGTTGGGGAAGCGGGTAAT
GCCTTTGTCGCCAGTCGCGAGGCGTTGCGCCAGGAGCCAAAACCGATTGGTCTGTTTGGTCTGCTCCGGGCGTTACGCGA
TCCCGATGTGCAACGCGCTGCCGGGCTGATTGTTGAATTCGGTCGCCGCTTTGGTCGTTCGCTGAAATAG

Upstream 100 bases:

>100_bases
CGTTATGCATCAGTAATTCTTATACTTCGTTCAAGCAATCACTTTTTTCGTTTGGATCGCCACGATTCGCGTTCGCTATC
ACTATTGAGCGAGGGGCGCA

Downstream 100 bases:

>100_bases
GCTGATGCACGAATTATCGATTGCGCACAACATCGTGACGATTGCCAGCGATGCTGCGGCAGAAGCAGGAGTGGATCGGA
TCAGCGCCGTTCACCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTSNGATTTAHADRPLNAHALLERLNEPQTAAALHRLLDHAELLAFSVGAVDSLLQRGDVIADNVAASVHELRAALPDDG
GALAAQLMRLSRTLPQLTTTVEQLATLTAQPAFQRLLATLSKPDTLAALDRLLAQSELLAFLVSALDHLLARGDELTENI
RLAVEELRTTMNDRTITADKLIDAFIAFLPYFPRLVAVAPNFIEVIERIEPFIASAEFDALLDSGVFHPDTVQLVGEAGN
AFVASREALRQEPKPIGLFGLLRALRDPDVQRAAGLIVEFGRRFGRSLK

Sequences:

>Translated_289_residues
MTSNGATTTAHADRPLNAHALLERLNEPQTAAALHRLLDHAELLAFSVGAVDSLLQRGDVIADNVAASVHELRAALPDDG
GALAAQLMRLSRTLPQLTTTVEQLATLTAQPAFQRLLATLSKPDTLAALDRLLAQSELLAFLVSALDHLLARGDELTENI
RLAVEELRTTMNDRTITADKLIDAFIAFLPYFPRLVAVAPNFIEVIERIEPFIASAEFDALLDSGVFHPDTVQLVGEAGN
AFVASREALRQEPKPIGLFGLLRALRDPDVQRAAGLIVEFGRRFGRSLK
>Mature_288_residues
TSNGATTTAHADRPLNAHALLERLNEPQTAAALHRLLDHAELLAFSVGAVDSLLQRGDVIADNVAASVHELRAALPDDGG
ALAAQLMRLSRTLPQLTTTVEQLATLTAQPAFQRLLATLSKPDTLAALDRLLAQSELLAFLVSALDHLLARGDELTENIR
LAVEELRTTMNDRTITADKLIDAFIAFLPYFPRLVAVAPNFIEVIERIEPFIASAEFDALLDSGVFHPDTVQLVGEAGNA
FVASREALRQEPKPIGLFGLLRALRDPDVQRAAGLIVEFGRRFGRSLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31331; Mature: 31200

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNGATTTAHADRPLNAHALLERLNEPQTAAALHRLLDHAELLAFSVGAVDSLLQRGDV
CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IADNVAASVHELRAALPDDGGALAAQLMRLSRTLPQLTTTVEQLATLTAQPAFQRLLATL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SKPDTLAALDRLLAQSELLAFLVSALDHLLARGDELTENIRLAVEELRTTMNDRTITADK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
LIDAFIAFLPYFPRLVAVAPNFIEVIERIEPFIASAEFDALLDSGVFHPDTVQLVGEAGN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
AFVASREALRQEPKPIGLFGLLRALRDPDVQRAAGLIVEFGRRFGRSLK
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSNGATTTAHADRPLNAHALLERLNEPQTAAALHRLLDHAELLAFSVGAVDSLLQRGDV
CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IADNVAASVHELRAALPDDGGALAAQLMRLSRTLPQLTTTVEQLATLTAQPAFQRLLATL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SKPDTLAALDRLLAQSELLAFLVSALDHLLARGDELTENIRLAVEELRTTMNDRTITADK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
LIDAFIAFLPYFPRLVAVAPNFIEVIERIEPFIASAEFDALLDSGVFHPDTVQLVGEAGN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
AFVASREALRQEPKPIGLFGLLRALRDPDVQRAAGLIVEFGRRFGRSLK
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA