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The map label for this gene is aglF [H]

Identifier: 222526193

GI number: 222526193

Start: 3646828

End: 3647964

Strand: Reverse

Name: aglF [H]

Synonym: Chy400_2952

Alternate gene names: 222526193

Gene position: 3647964-3646828 (Counterclockwise)

Preceding gene: 222526194

Following gene: 222526192

Centisome position: 69.24

GC content: 52.42

Gene sequence:

>1137_bases
ATGCGACCAACACGTGAAATCAGCCGATCTCCAGAGGTAGGCGGCATCGGGGTCTTTTTGTCAACCACCCTCGGTCGTCT
CCTGGTGTCGATTTTTGTGCCGGCCATTACGTTTTTTGTCCTGTATCAGGTCTTTATCTTCCTCCGCGACACCCAGATCC
CGCAGTGGATTACAGCCATCATTGCTATTTTGTGGGGTGTCGGTGGCGTGTTGGCGCTCTATACACTCTCAAACTATCTG
ATCGAGCAGTTGAATCCATCGTGGCGCAGGCGTCTGATCCCCTTTGTGTTTGTGGGTCCGGCACTGGCCATCCTGACCTG
GTACCTGGTCTTGCCGACTATCCGCTCATTCATTGCCAGTCTCTACGACGCCCGTGGTATCAATTTTGTCGGGCTTGATA
ACTATATCTACGCTTTTACCAGCCAGGAGATGTTGCAATCGTACCGCAACAACTTCCTCTTCTGGATGATCTTCGGTACC
GGTATGAGTGTCGGCTTCGGTCTGCTGATTGCCGTGCTTGTAGATCGAACGCACCCGATCTTCGAGACGGTCTGCAAGGC
ACTGATCTTTATGCCGATGGTGATTTCCGGTGTCGGTGCTTCGGTGATCTGGAAATTCATCTACGAGTATCGCCCGACCG
GCTCGACCCAGATCGGATTACTGAACGGGATCATTACTGCCCTGGGTTTTGAATCGCAAGGCTGGCTCCTGTTGCAGCCA
TGGAATAACCTTTTTCTGGTGATCATTATGGTCTGGCTACAGACCGGTTATTCGATGGTCATTATTTCGGCGGCCATTAA
AGCCATTCCCGCTGATTTGCTGGAAGCGGGACGCATCGACGGTGCAAACGAGTTCCAAATCTTCCGCAGCATCATTTTGC
CGTCGATTCAGGGCACGTTGATTACGGTCACCACGACGATCATCCTCTTCACGCTGAAGATTTTTGACATTGTGCAGTCG
ATGACGGGTGGTAACTTCGGGACACAGGTTATCGCCAACGTGCAGTACGTCCAATTGTTCCGCCAGGTGAATAACGGACG
GGCCGCAGCCATTGCGATTATCTTGCTGCTGGCGGTGTTGCCGGTGATGTATTACAACTTGCGGCAGTTTGGCAAGCAGA
CGGAGGCCTTCCGATGA

Upstream 100 bases:

>100_bases
GTAGCCGGTAGTTCGATATGGCGGGTAGCCTGCTACCCGCCATCCTCCATGTCTGATTGTGATATAGAGTGGCAATGCTG
CCACTCAAGGAGGAGTTCTG

Downstream 100 bases:

>100_bases
CAACAGCAACTCTTGCAACACCACGCCATCGCCGCCGCTTTCGTTTCGGTACGTTCATGGTGTATGTGGTGATGATTATC
ATCACGCTATTCTGGATTAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRPTREISRSPEVGGIGVFLSTTLGRLLVSIFVPAITFFVLYQVFIFLRDTQIPQWITAIIAILWGVGGVLALYTLSNYL
IEQLNPSWRRRLIPFVFVGPALAILTWYLVLPTIRSFIASLYDARGINFVGLDNYIYAFTSQEMLQSYRNNFLFWMIFGT
GMSVGFGLLIAVLVDRTHPIFETVCKALIFMPMVISGVGASVIWKFIYEYRPTGSTQIGLLNGIITALGFESQGWLLLQP
WNNLFLVIIMVWLQTGYSMVIISAAIKAIPADLLEAGRIDGANEFQIFRSIILPSIQGTLITVTTTIILFTLKIFDIVQS
MTGGNFGTQVIANVQYVQLFRQVNNGRAAAIAIILLLAVLPVMYYNLRQFGKQTEAFR

Sequences:

>Translated_378_residues
MRPTREISRSPEVGGIGVFLSTTLGRLLVSIFVPAITFFVLYQVFIFLRDTQIPQWITAIIAILWGVGGVLALYTLSNYL
IEQLNPSWRRRLIPFVFVGPALAILTWYLVLPTIRSFIASLYDARGINFVGLDNYIYAFTSQEMLQSYRNNFLFWMIFGT
GMSVGFGLLIAVLVDRTHPIFETVCKALIFMPMVISGVGASVIWKFIYEYRPTGSTQIGLLNGIITALGFESQGWLLLQP
WNNLFLVIIMVWLQTGYSMVIISAAIKAIPADLLEAGRIDGANEFQIFRSIILPSIQGTLITVTTTIILFTLKIFDIVQS
MTGGNFGTQVIANVQYVQLFRQVNNGRAAAIAIILLLAVLPVMYYNLRQFGKQTEAFR
>Mature_378_residues
MRPTREISRSPEVGGIGVFLSTTLGRLLVSIFVPAITFFVLYQVFIFLRDTQIPQWITAIIAILWGVGGVLALYTLSNYL
IEQLNPSWRRRLIPFVFVGPALAILTWYLVLPTIRSFIASLYDARGINFVGLDNYIYAFTSQEMLQSYRNNFLFWMIFGT
GMSVGFGLLIAVLVDRTHPIFETVCKALIFMPMVISGVGASVIWKFIYEYRPTGSTQIGLLNGIITALGFESQGWLLLQP
WNNLFLVIIMVWLQTGYSMVIISAAIKAIPADLLEAGRIDGANEFQIFRSIILPSIQGTLITVTTTIILFTLKIFDIVQS
MTGGNFGTQVIANVQYVQLFRQVNNGRAAAIAIILLLAVLPVMYYNLRQFGKQTEAFR

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=25.5102040816327, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790465, Length=255, Percent_Identity=25.0980392156863, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 42388; Mature: 42388

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTREISRSPEVGGIGVFLSTTLGRLLVSIFVPAITFFVLYQVFIFLRDTQIPQWITAI
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IAILWGVGGVLALYTLSNYLIEQLNPSWRRRLIPFVFVGPALAILTWYLVLPTIRSFIAS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYDARGINFVGLDNYIYAFTSQEMLQSYRNNFLFWMIFGTGMSVGFGLLIAVLVDRTHPI
HHHCCCCCEEECCCHHEEHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCHH
FETVCKALIFMPMVISGVGASVIWKFIYEYRPTGSTQIGLLNGIITALGFESQGWLLLQP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECC
WNNLFLVIIMVWLQTGYSMVIISAAIKAIPADLLEAGRIDGANEFQIFRSIILPSIQGTL
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH
ITVTTTIILFTLKIFDIVQSMTGGNFGTQVIANVQYVQLFRQVNNGRAAAIAIILLLAVL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PVMYYNLRQFGKQTEAFR
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRPTREISRSPEVGGIGVFLSTTLGRLLVSIFVPAITFFVLYQVFIFLRDTQIPQWITAI
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IAILWGVGGVLALYTLSNYLIEQLNPSWRRRLIPFVFVGPALAILTWYLVLPTIRSFIAS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYDARGINFVGLDNYIYAFTSQEMLQSYRNNFLFWMIFGTGMSVGFGLLIAVLVDRTHPI
HHHCCCCCEEECCCHHEEHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCHH
FETVCKALIFMPMVISGVGASVIWKFIYEYRPTGSTQIGLLNGIITALGFESQGWLLLQP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECC
WNNLFLVIIMVWLQTGYSMVIISAAIKAIPADLLEAGRIDGANEFQIFRSIILPSIQGTL
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH
ITVTTTIILFTLKIFDIVQSMTGGNFGTQVIANVQYVQLFRQVNNGRAAAIAIILLLAVL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PVMYYNLRQFGKQTEAFR
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]