| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526127
Identifier: 222526127
GI number: 222526127
Start: 3568028
End: 3568738
Strand: Reverse
Name: 222526127
Synonym: Chy400_2884
Alternate gene names: NA
Gene position: 3568738-3568028 (Counterclockwise)
Preceding gene: 222526131
Following gene: 222526126
Centisome position: 67.73
GC content: 52.46
Gene sequence:
>711_bases ATGAGCACACGCGATCTCATTGGACTGATTGTCTCGTTCGGGTATGCATTTGGGCTGCTCATCATTGCCGAGGTGATTCG CCGCTGGCGAGGGTATCCGCAAGATTTCACCCGCAAATTTGTCCACATCGGTGCCGGTATGTGGGTGTTTGGGGTACTGG CCCTGTTTGAAAACTGGACAATTGGGATTATTCCGTTTGCGACCTTCATCGTCCTCAATTTCATCTTCTATCGTTTTCGC TTACTGGCAGCAATTGACGCTCCCGACAGCACACCAGGCACAGTCTACTTTGCCTTATCCATAACAATCCTCTTTTTAAT CTTCTGGCGTACCAATTCTCCCGATGATCGCGGTTATATCGCAGCAGCCGGTACAATGGCTATGACGTGGGGTGACGCAC TGGCAGCAATTGTTGGCAAGCGCTGGGGGCGCCACTACTATCAAATCGGTCAGGGACGCCGCTCATTTGAAGGCTCGGCA GCGATGTTCATCGCCAGCACTGTCGCAATTCTGCTGACCCTGCTATTTACACCGGGATCAGCGCTTAGCCCGCAGAGTTC CCCGATAGATGTTGGGGCAGCACTGATCACCAGTATTGTGGCGGGACTGGTGGCAACAATCGCCGAAGGTGTTTCACCGC ATGGAACCGATAACATAAGTGTACCACTATTGGCCGGTGCAGTCATTGCCGTAATGCTAGGAGTTGTGTGA
Upstream 100 bases:
>100_bases TAAATATTCACCACGTACACTACCGCCAATCAATTGACGATTCGACAGGTTATAGATAGAATAAAAGTCAAGTATCGCCA TAGATAGCACCGGCACCATT
Downstream 100 bases:
>100_bases TAATATTAGTCTGGTGGGGCAACGCTCACTGAAGTTGTAGAGGAGCGCAGCTTGGATAATCTTCGCATTCCAATCTTGAA AATAGGCGACATTTTAATCG
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: Dolichol Kinase; Integral Membrane Protein; Phosphatidate Cytidylyltransferase Family Protein
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSTRDLIGLIVSFGYAFGLLIIAEVIRRWRGYPQDFTRKFVHIGAGMWVFGVLALFENWTIGIIPFATFIVLNFIFYRFR LLAAIDAPDSTPGTVYFALSITILFLIFWRTNSPDDRGYIAAAGTMAMTWGDALAAIVGKRWGRHYYQIGQGRRSFEGSA AMFIASTVAILLTLLFTPGSALSPQSSPIDVGAALITSIVAGLVATIAEGVSPHGTDNISVPLLAGAVIAVMLGVV
Sequences:
>Translated_236_residues MSTRDLIGLIVSFGYAFGLLIIAEVIRRWRGYPQDFTRKFVHIGAGMWVFGVLALFENWTIGIIPFATFIVLNFIFYRFR LLAAIDAPDSTPGTVYFALSITILFLIFWRTNSPDDRGYIAAAGTMAMTWGDALAAIVGKRWGRHYYQIGQGRRSFEGSA AMFIASTVAILLTLLFTPGSALSPQSSPIDVGAALITSIVAGLVATIAEGVSPHGTDNISVPLLAGAVIAVMLGVV >Mature_235_residues STRDLIGLIVSFGYAFGLLIIAEVIRRWRGYPQDFTRKFVHIGAGMWVFGVLALFENWTIGIIPFATFIVLNFIFYRFRL LAAIDAPDSTPGTVYFALSITILFLIFWRTNSPDDRGYIAAAGTMAMTWGDALAAIVGKRWGRHYYQIGQGRRSFEGSAA MFIASTVAILLTLLFTPGSALSPQSSPIDVGAALITSIVAGLVATIAEGVSPHGTDNISVPLLAGAVIAVMLGVV
Specific function: Unknown
COG id: COG0170
COG function: function code I; Dolichol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25441; Mature: 25310
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRDLIGLIVSFGYAFGLLIIAEVIRRWRGYPQDFTRKFVHIGAGMWVFGVLALFENWT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC IGIIPFATFIVLNFIFYRFRLLAAIDAPDSTPGTVYFALSITILFLIFWRTNSPDDRGYI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE AAAGTMAMTWGDALAAIVGKRWGRHYYQIGQGRRSFEGSAAMFIASTVAILLTLLFTPGS EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC ALSPQSSPIDVGAALITSIVAGLVATIAEGVSPHGTDNISVPLLAGAVIAVMLGVV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure STRDLIGLIVSFGYAFGLLIIAEVIRRWRGYPQDFTRKFVHIGAGMWVFGVLALFENWT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCC IGIIPFATFIVLNFIFYRFRLLAAIDAPDSTPGTVYFALSITILFLIFWRTNSPDDRGYI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE AAAGTMAMTWGDALAAIVGKRWGRHYYQIGQGRRSFEGSAAMFIASTVAILLTLLFTPGS EECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC ALSPQSSPIDVGAALITSIVAGLVATIAEGVSPHGTDNISVPLLAGAVIAVMLGVV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA