| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526093
Identifier: 222526093
GI number: 222526093
Start: 3519568
End: 3521604
Strand: Reverse
Name: 222526093
Synonym: Chy400_2850
Alternate gene names: NA
Gene position: 3521604-3519568 (Counterclockwise)
Preceding gene: 222526094
Following gene: 222526079
Centisome position: 66.84
GC content: 60.14
Gene sequence:
>2037_bases GTGGGGCGTTTCCGTGTTGTGCATCCTTGCCTGCTGGTTATCCTGTTCGCTATAGTCCTGGTGGGATGCGATCTGATCCC TGTGGGTGAGGGAGAGCAAATTGCAAATATCGAGACAATCATTGCCGGTACGCCTTCGGCGACACCAACGGCTACCGCTA CTGCTACGGCAACTGCCACACCCACTGCGACGCCGACATTCGGCCCAACACCAACGGCTACCGCAACAGCTACGCCAACG GTGACACCATTGCCACCAACGCCAACACCGAATCCGGCATTAACCGGCTTTGGCTACTGTACCCAAACCGTTGGTTTGAC TACCGGTCGCTTCTCGGCAGCGTTGCAAGAGGTGCGAACGAGCGGGAATCCGGCTTTTGAGCAGCTTGACCTCATCTTTG ATCTGAGCCAGGGTTCGGCTCCGCTGAGCGCGACAGTCAGTTGTCTGACCGTAGCTGATGCCCGCATCGTGCCGGCTGCT ACAATGCTTAACGCTCCGTATGCTCTGCGGATTGAACTGGCGGGCTGGTTGCGTGATGACCGCTTTGCAGCGTCGCCAGT TTCACAAACGGTGTCATTTACAAATACCCGCACGATTACCCAGGCATTGCTGGTGGTCGATCCCCAGGCTGACGTGGGGG CAACCATGCTGGTGCCGCTTGCTGAACCGGTGCCATTTCGGGTGACGCTGGCCCAGAACCGGTTGTCAGTGGCCGTTGCG CGTTCAGCTACGTTTGGCGTAGCCAGTGATACGTTGCGAGTGCCATCTGGTAGTGCACCAGCTTCGCTCGAACCGCTCTA CTTCCTGTTCGATGGTGATGTCTGGCAACTTGATCTGGCATTCTCCACTGTCGGTGATGGCATGACCCGTCGACTGGCCG GTGCGGTGAATATTACCGACTCGGCTGAAACAGAAACTCATCTGGCAGTCAGTCCGGGTGGTGACTATCTGGCATTCTGT CGCGCCGAGCCGGGACTCGATCCGGCTGATGCAGTGCTGGCCGTGCCTTCGACGCTCTGGCTGTTGCCACGCGCCGGAGG CGAGGCGCAACCGCTGGCTCAGGTAGGGGTGAGTTGCGCCGATCCGGTCTTTAGCCCGGATGGTGCCACGATTGCGTTTG CGGTTGATGAAACCGGCGCAATTCCGACCCAATGGACAATTTATACCGTACCGGTGAGCGGTGGTGAACCAGAGCGGGTA GAGGCTGCACTCGACGAATGGAGCCGGTTCATGCCGCAGTGGCTCAGCGGGGGACGGTTGGTGTACCGCGCTGAAGCTCC CGATGGCCGCAGTGCGCTCTTCTTGCGTCTGCCGACCGGGGAAGTTCGCGATGTGGGTGCTGAACTGTTGACTGATGAGC GCCTTGTGGTGCGGTACCGTGGCTTTGGAGCATTGATCGCCAGCCCCAACGGGGAATACGTTGCGGTAGAGGCATTGCGC GCTGATGATCCAGGTGCCGATCTGTTGATCCTTGATAGCGCAGGGCAACTGGTCGAGCGGATCGGTACGCAGCGTGTGAC CTTACCGGCACCCACGGCCACACCGACTGTGCCTCCAACCGCTACAGCAACTGCCACGCCAACCGCGACACCGACCGGCA CCGTCACACCCCAGCCGCCAACCGCGACACCAACCGCTACTGCGATCCCAACGGCAACGCCAGAACCCATCCCGCCCCAA CCACTGCGCGAAGGACCCTTCTGGACACGACCGTTAGGATGGGACCAGGAAGGGCGGTTGCTATACCTGACAACGCTATG TGCCAGCGATCTGGTGCAGGACTATCAGCTCTACCGCTGGCGTGGCCTTCAGCGCAGTGAATTGCTGGCCACCGGTCAGA GTCTGGGCGGAATCGGCGCTGTTGTGGTACGTAATGGGCAGCTCTTCTACGCTGCGGTGAATGGGGCCGATGCCGGTCCG CGTGGCCCGCAGACCCAAAGTCAGCGTTATCCAACAACATTGTGGGTGTGGGACGTAGATAGCGGTGACCGGGCTGCACT ACTCGATCTGGTGCGCGGTGTCCGTGACGTGAAGTAA
Upstream 100 bases:
>100_bases GGATCAAGGTTATGTTACCGAATGGGTAGTGTACGACTCATTTGGTTGTTGATCAGCGCTGCATCCGGTCGCTGATCGGG TGGAGCATGAGGAGACGTTT
Downstream 100 bases:
>100_bases TGATGGGGAAATCGGGTGTTACAACACTACACTCGCACCGGGGCTGAGCTGGCGGCGAAGTGGTTTTCGTCTTCACCGGA TATGCGGTGAAGCGTGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MGRFRVVHPCLLVILFAIVLVGCDLIPVGEGEQIANIETIIAGTPSATPTATATATATATPTATPTFGPTPTATATATPT VTPLPPTPTPNPALTGFGYCTQTVGLTTGRFSAALQEVRTSGNPAFEQLDLIFDLSQGSAPLSATVSCLTVADARIVPAA TMLNAPYALRIELAGWLRDDRFAASPVSQTVSFTNTRTITQALLVVDPQADVGATMLVPLAEPVPFRVTLAQNRLSVAVA RSATFGVASDTLRVPSGSAPASLEPLYFLFDGDVWQLDLAFSTVGDGMTRRLAGAVNITDSAETETHLAVSPGGDYLAFC RAEPGLDPADAVLAVPSTLWLLPRAGGEAQPLAQVGVSCADPVFSPDGATIAFAVDETGAIPTQWTIYTVPVSGGEPERV EAALDEWSRFMPQWLSGGRLVYRAEAPDGRSALFLRLPTGEVRDVGAELLTDERLVVRYRGFGALIASPNGEYVAVEALR ADDPGADLLILDSAGQLVERIGTQRVTLPAPTATPTVPPTATATATPTATPTGTVTPQPPTATPTATAIPTATPEPIPPQ PLREGPFWTRPLGWDQEGRLLYLTTLCASDLVQDYQLYRWRGLQRSELLATGQSLGGIGAVVVRNGQLFYAAVNGADAGP RGPQTQSQRYPTTLWVWDVDSGDRAALLDLVRGVRDVK
Sequences:
>Translated_678_residues MGRFRVVHPCLLVILFAIVLVGCDLIPVGEGEQIANIETIIAGTPSATPTATATATATATPTATPTFGPTPTATATATPT VTPLPPTPTPNPALTGFGYCTQTVGLTTGRFSAALQEVRTSGNPAFEQLDLIFDLSQGSAPLSATVSCLTVADARIVPAA TMLNAPYALRIELAGWLRDDRFAASPVSQTVSFTNTRTITQALLVVDPQADVGATMLVPLAEPVPFRVTLAQNRLSVAVA RSATFGVASDTLRVPSGSAPASLEPLYFLFDGDVWQLDLAFSTVGDGMTRRLAGAVNITDSAETETHLAVSPGGDYLAFC RAEPGLDPADAVLAVPSTLWLLPRAGGEAQPLAQVGVSCADPVFSPDGATIAFAVDETGAIPTQWTIYTVPVSGGEPERV EAALDEWSRFMPQWLSGGRLVYRAEAPDGRSALFLRLPTGEVRDVGAELLTDERLVVRYRGFGALIASPNGEYVAVEALR ADDPGADLLILDSAGQLVERIGTQRVTLPAPTATPTVPPTATATATPTATPTGTVTPQPPTATPTATAIPTATPEPIPPQ PLREGPFWTRPLGWDQEGRLLYLTTLCASDLVQDYQLYRWRGLQRSELLATGQSLGGIGAVVVRNGQLFYAAVNGADAGP RGPQTQSQRYPTTLWVWDVDSGDRAALLDLVRGVRDVK >Mature_677_residues GRFRVVHPCLLVILFAIVLVGCDLIPVGEGEQIANIETIIAGTPSATPTATATATATATPTATPTFGPTPTATATATPTV TPLPPTPTPNPALTGFGYCTQTVGLTTGRFSAALQEVRTSGNPAFEQLDLIFDLSQGSAPLSATVSCLTVADARIVPAAT MLNAPYALRIELAGWLRDDRFAASPVSQTVSFTNTRTITQALLVVDPQADVGATMLVPLAEPVPFRVTLAQNRLSVAVAR SATFGVASDTLRVPSGSAPASLEPLYFLFDGDVWQLDLAFSTVGDGMTRRLAGAVNITDSAETETHLAVSPGGDYLAFCR AEPGLDPADAVLAVPSTLWLLPRAGGEAQPLAQVGVSCADPVFSPDGATIAFAVDETGAIPTQWTIYTVPVSGGEPERVE AALDEWSRFMPQWLSGGRLVYRAEAPDGRSALFLRLPTGEVRDVGAELLTDERLVVRYRGFGALIASPNGEYVAVEALRA DDPGADLLILDSAGQLVERIGTQRVTLPAPTATPTVPPTATATATPTATPTGTVTPQPPTATPTATAIPTATPEPIPPQP LREGPFWTRPLGWDQEGRLLYLTTLCASDLVQDYQLYRWRGLQRSELLATGQSLGGIGAVVVRNGQLFYAAVNGADAGPR GPQTQSQRYPTTLWVWDVDSGDRAALLDLVRGVRDVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71208; Mature: 71077
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFRVVHPCLLVILFAIVLVGCDLIPVGEGEQIANIETIIAGTPSATPTATATATATAT CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCC PTATPTFGPTPTATATATPTVTPLPPTPTPNPALTGFGYCTQTVGLTTGRFSAALQEVRT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCHHHHHHHHHHHH SGNPAFEQLDLIFDLSQGSAPLSATVSCLTVADARIVPAATMLNAPYALRIELAGWLRDD CCCCCHHEEEEEEEECCCCCCHHHHEEEEEEECCCCCCHHHHHCCCEEEEEEEEEEECCC RFAASPVSQTVSFTNTRTITQALLVVDPQADVGATMLVPLAEPVPFRVTLAQNRLSVAVA CCCCCCHHHHEECCCHHEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEE RSATFGVASDTLRVPSGSAPASLEPLYFLFDGDVWQLDLAFSTVGDGMTRRLAGAVNITD ECCCCCCCCCEEECCCCCCCCCCCCEEEEEECCEEEEEEEEHHHCCCHHHHHHCEEECCC SAETETHLAVSPGGDYLAFCRAEPGLDPADAVLAVPSTLWLLPRAGGEAQPLAQVGVSCA CCCCCEEEEECCCCCEEEEEECCCCCCHHHHEEECCCEEEEEECCCCCCCCHHHHCCCCC DPVFSPDGATIAFAVDETGAIPTQWTIYTVPVSGGEPERVEAALDEWSRFMPQWLSGGRL CCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEE VYRAEAPDGRSALFLRLPTGEVRDVGAELLTDERLVVRYRGFGALIASPNGEYVAVEALR EEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCEEEEEEEE ADDPGADLLILDSAGQLVERIGTQRVTLPAPTATPTVPPTATATATPTATPTGTVTPQPP CCCCCCCEEEECCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TATPTATAIPTATPEPIPPQPLREGPFWTRPLGWDQEGRLLYLTTLCASDLVQDYQLYRW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH RGLQRSELLATGQSLGGIGAVVVRNGQLFYAAVNGADAGPRGPQTQSQRYPTTLWVWDVD CCCCHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC SGDRAALLDLVRGVRDVK CCCHHHHHHHHHHHHCCC >Mature Secondary Structure GRFRVVHPCLLVILFAIVLVGCDLIPVGEGEQIANIETIIAGTPSATPTATATATATAT CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEECCC PTATPTFGPTPTATATATPTVTPLPPTPTPNPALTGFGYCTQTVGLTTGRFSAALQEVRT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCHHHHHHHHHHHH SGNPAFEQLDLIFDLSQGSAPLSATVSCLTVADARIVPAATMLNAPYALRIELAGWLRDD CCCCCHHEEEEEEEECCCCCCHHHHEEEEEEECCCCCCHHHHHCCCEEEEEEEEEEECCC RFAASPVSQTVSFTNTRTITQALLVVDPQADVGATMLVPLAEPVPFRVTLAQNRLSVAVA CCCCCCHHHHEECCCHHEEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEE RSATFGVASDTLRVPSGSAPASLEPLYFLFDGDVWQLDLAFSTVGDGMTRRLAGAVNITD ECCCCCCCCCEEECCCCCCCCCCCCEEEEEECCEEEEEEEEHHHCCCHHHHHHCEEECCC SAETETHLAVSPGGDYLAFCRAEPGLDPADAVLAVPSTLWLLPRAGGEAQPLAQVGVSCA CCCCCEEEEECCCCCEEEEEECCCCCCHHHHEEECCCEEEEEECCCCCCCCHHHHCCCCC DPVFSPDGATIAFAVDETGAIPTQWTIYTVPVSGGEPERVEAALDEWSRFMPQWLSGGRL CCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEE VYRAEAPDGRSALFLRLPTGEVRDVGAELLTDERLVVRYRGFGALIASPNGEYVAVEALR EEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCEEEEEEEE ADDPGADLLILDSAGQLVERIGTQRVTLPAPTATPTVPPTATATATPTATPTGTVTPQPP CCCCCCCEEEECCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TATPTATAIPTATPEPIPPQPLREGPFWTRPLGWDQEGRLLYLTTLCASDLVQDYQLYRW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH RGLQRSELLATGQSLGGIGAVVVRNGQLFYAAVNGADAGPRGPQTQSQRYPTTLWVWDVD CCCCHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC SGDRAALLDLVRGVRDVK CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA