| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yfbK [C]
Identifier: 222526064
GI number: 222526064
Start: 3477714
End: 3480431
Strand: Reverse
Name: yfbK [C]
Synonym: Chy400_2821
Alternate gene names: 222526064
Gene position: 3480431-3477714 (Counterclockwise)
Preceding gene: 222526065
Following gene: 222526063
Centisome position: 66.06
GC content: 58.46
Gene sequence:
>2718_bases ATGGTGCTGAGCGTTGTTGAGCCGGCAGCATTATGGCTGTTTGTGCTCGCCATTCCTCTGCTTGGGCTGATCTGGCTGGG TCGTACTGATCTCCACCGTCGCCTTGGGCGTGTGCGATTATGGTTGCTGGTGGTGGTACGTTGTCTGATCCTGGCAGCGC TCGTATTGGCCGTGGCCGGCCTTCAGATCGGTCGACCGGTGAATGCTACCGCCACGGTTTTTCTGCTCGATGTTAGCGAC TCAGTCTCACCTGCCCAACGGGTAGCAACATTCGATTTTATTGAGCAGGCGGTGGCTACCGCCGATCCCGACGACCGTAT GGCCGTGATCGTGTTTGGCGCACGAGCAATGGTCGAGCGCGTGGCCGAACCGCCCCGTCCACTGAACCGGATCGACGCGC TGGTAGCCGGTTCACGCACCAATATTGAAGACGCCATCCAATTGGGACTGGCAATTTTGCCCGATGCGATGCATCGACGG CTGGTGTTGATCTCGGATGGCGGTGAGAATGCAGGTCAGGCGTTAACAGCCGCTCGTTTGGCGGCTGCCCGTGGCGTTCC GATTGAGGTCGTCATCCTGTCGGCGGAGCGCGGCCCTGATGCGCTGATCACGGCCTTACAGGCACCGACGACGGCTGACA TCAATCAGAACATTCCGCTAACTGTTCAGATTGAAAGTGAAGTCGAGGGCGCGGCGACGGTGCAGTTGATCGCTGATGGT CAGTTGCTGGCCGAACAGTCCGTGACGGTGACACCCGGTCGCAATCAGATTGCATTTTCTGTACCGGCACGCGAGAGTGG GTTTCGCCGCTTTGAAGCGCGTCTGATTGCTCCCTTCGATACCCAGCCGGCCAACAATCGGGCGGTGGCATTTACCTTTG TCAGTGGCCCACCGCGCGTGTTGTTGTTAACGGTGGGACCGGAACAGGCACTGGCACTGGCCGAAGCATGGCGTGCCGGA GGGATTGAGGTGACGGTGCAGACACCGATGCAGGCGCCGGCCAATCCACTCGATTTGCGCTCCTTCGATGCGATTGCTCT AGTTGACACACCGGCGAACGCGGTTTCGCTGGCACTTCAGCGCACCCTGACGACCTACGTGCGCGATCTGGGCGGTGGAC TGCTGTTCATTGGTGGCCCCCAATCGTTCGGCGCCGGAGGCTGGCGTCGTTCTCTGCTCGAGTCGTTATTTCCGGTTTCG CTTGATCCGCCATCGCGCGAGGAACGCTTCGATCTGGCGCTGACGCTGGTCATCGACCGCAGCGGGAGTATGAGCGAACT CGTGGACGGTTTGCGCACCCAACTCGATCTGGCCCGTGAAGCGGCATTTCAAGCGAGCCTTGGGTTATCGCGTCAGGATC AGCTCTCGATTATCGCCTTCGATAGCGTTGCCGATGTGATTTTACCGTTGCAACCACTCCCTGATCTGGCGACAATTGAA GATGCGCTGAGTCGATTATCTGCCGGTGGCGGCACAAATATTCGTAGCGGAATGGCACTGGCAGCCGAGACCATTGCCAC GGCTGATGCCCGGATTCGACATGTGATCCTCTTGACCGATGGTGTCTCCGAGACTGAATATGCCGATCTGGTTGCCAACC TGCGCGCACAAGGGGTTACGGTCAGTACGGTGGCGATTGGTCTGAATACCGATCCAGAACTCGAACGAGTGGCGCAGATC GGTGGCGGTAAATACTACGTTGTTCGTCAAGCCGAAGCTCTGCCACAGATTCTGCTGGAAGAGACTGTCCGGGTGGCGAA TCGCGATCTGGTAGAAGAGCCTTTCACACCTGCACTTGCATTACCGACACCATGGCTGCGCAATTTCAGCGCTTTGCCAC CACTGCAAGGGCGGAATGTCGTTGCCGAACGGTCAATCAGTCGGGTGCTCCTGGTCGCCGATGACGGATCGCCGCTCCTG GCGACGGCCCAGATCGGTGTTGGGCGGGTGCTGGCCTGGGCAAGTGATATGACCGGACATTGGGCGACTGCATGGTTATC CTGGTCAGCATTTCCCCGTTTTGCCGCCGGATTGGTGTCTGAAGTACTCCCACTCAATAGTGATGATTATCTATCGCTCA GCGCAACGGTAACCGCAGATCGAGTTGAAATTGACCTTCAGGCCCGTGATCGCAGTGGATTGCCTGTTGAATTGGGCGAG ATTCGCAGTCGCATTAGTGGCCTGGCCGATGAAGTCGTGCCAGATTTTGTGCAGATCGCGCCTGGACGGTATCGTGCGAT CACCACCATCGATCAGATGGGAGCGTATCTGGTACAGGTGAGTGCAACTGACCGCAACGGGATGCCGCTCGGCACGGTTG CCACCGGTCTGACGGTGAACTACTCACCGGAGTATGGACAGTTTGCGGCGAATCCTGGCCTCATGACCGAACTTGCAGCA TTGACCGGTGGTCAGGTTAATCCGCCGCCAGACCTGATCTTTGCTCCAACAGAACGTTCGGTGTACGAGGTCTGGCCGGT AACCATGCCTCTAATCTGGCTGGCACTGGCATTATTGCCAGTAGACATTGCGCTACGTCGACTCTTTGTCGCAGTGCCCG ACTGGCGTCCTGTTGTCATCCGCCGACCGCAGCGCAAACCACCGGAGGCGAAACCATCTTCATCAGCGCCAGCCCCAACC TCTACCTTACCGCAAAGCGACGAAGAGCGGATTGCCGCACTACTGGCAGCGAAACGACGCCGTCGCCGGGATGAGTGA
Upstream 100 bases:
>100_bases TATCTGCGTCTTCTCAAGCTGTGGGTTCTGTTTACCCGGCGTCATTTCCTCTCAATACGATGGTACGGCATACTGCACTA CTATCCTGGAACGGAGCTGA
Downstream 100 bases:
>100_bases TGCTTTATGCTATACTGCCAGAAGGATTTGATGGTACAACAGTAGTTGACGGAGGAGCCCATGTCAACTGAACAACCAGC AGTCACCGTGCGGCCTGCCG
Product: von Willebrand factor type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 905; Mature: 905
Protein sequence:
>905_residues MVLSVVEPAALWLFVLAIPLLGLIWLGRTDLHRRLGRVRLWLLVVVRCLILAALVLAVAGLQIGRPVNATATVFLLDVSD SVSPAQRVATFDFIEQAVATADPDDRMAVIVFGARAMVERVAEPPRPLNRIDALVAGSRTNIEDAIQLGLAILPDAMHRR LVLISDGGENAGQALTAARLAAARGVPIEVVILSAERGPDALITALQAPTTADINQNIPLTVQIESEVEGAATVQLIADG QLLAEQSVTVTPGRNQIAFSVPARESGFRRFEARLIAPFDTQPANNRAVAFTFVSGPPRVLLLTVGPEQALALAEAWRAG GIEVTVQTPMQAPANPLDLRSFDAIALVDTPANAVSLALQRTLTTYVRDLGGGLLFIGGPQSFGAGGWRRSLLESLFPVS LDPPSREERFDLALTLVIDRSGSMSELVDGLRTQLDLAREAAFQASLGLSRQDQLSIIAFDSVADVILPLQPLPDLATIE DALSRLSAGGGTNIRSGMALAAETIATADARIRHVILLTDGVSETEYADLVANLRAQGVTVSTVAIGLNTDPELERVAQI GGGKYYVVRQAEALPQILLEETVRVANRDLVEEPFTPALALPTPWLRNFSALPPLQGRNVVAERSISRVLLVADDGSPLL ATAQIGVGRVLAWASDMTGHWATAWLSWSAFPRFAAGLVSEVLPLNSDDYLSLSATVTADRVEIDLQARDRSGLPVELGE IRSRISGLADEVVPDFVQIAPGRYRAITTIDQMGAYLVQVSATDRNGMPLGTVATGLTVNYSPEYGQFAANPGLMTELAA LTGGQVNPPPDLIFAPTERSVYEVWPVTMPLIWLALALLPVDIALRRLFVAVPDWRPVVIRRPQRKPPEAKPSSSAPAPT STLPQSDEERIAALLAAKRRRRRDE
Sequences:
>Translated_905_residues MVLSVVEPAALWLFVLAIPLLGLIWLGRTDLHRRLGRVRLWLLVVVRCLILAALVLAVAGLQIGRPVNATATVFLLDVSD SVSPAQRVATFDFIEQAVATADPDDRMAVIVFGARAMVERVAEPPRPLNRIDALVAGSRTNIEDAIQLGLAILPDAMHRR LVLISDGGENAGQALTAARLAAARGVPIEVVILSAERGPDALITALQAPTTADINQNIPLTVQIESEVEGAATVQLIADG QLLAEQSVTVTPGRNQIAFSVPARESGFRRFEARLIAPFDTQPANNRAVAFTFVSGPPRVLLLTVGPEQALALAEAWRAG GIEVTVQTPMQAPANPLDLRSFDAIALVDTPANAVSLALQRTLTTYVRDLGGGLLFIGGPQSFGAGGWRRSLLESLFPVS LDPPSREERFDLALTLVIDRSGSMSELVDGLRTQLDLAREAAFQASLGLSRQDQLSIIAFDSVADVILPLQPLPDLATIE DALSRLSAGGGTNIRSGMALAAETIATADARIRHVILLTDGVSETEYADLVANLRAQGVTVSTVAIGLNTDPELERVAQI GGGKYYVVRQAEALPQILLEETVRVANRDLVEEPFTPALALPTPWLRNFSALPPLQGRNVVAERSISRVLLVADDGSPLL ATAQIGVGRVLAWASDMTGHWATAWLSWSAFPRFAAGLVSEVLPLNSDDYLSLSATVTADRVEIDLQARDRSGLPVELGE IRSRISGLADEVVPDFVQIAPGRYRAITTIDQMGAYLVQVSATDRNGMPLGTVATGLTVNYSPEYGQFAANPGLMTELAA LTGGQVNPPPDLIFAPTERSVYEVWPVTMPLIWLALALLPVDIALRRLFVAVPDWRPVVIRRPQRKPPEAKPSSSAPAPT STLPQSDEERIAALLAAKRRRRRDE >Mature_905_residues MVLSVVEPAALWLFVLAIPLLGLIWLGRTDLHRRLGRVRLWLLVVVRCLILAALVLAVAGLQIGRPVNATATVFLLDVSD SVSPAQRVATFDFIEQAVATADPDDRMAVIVFGARAMVERVAEPPRPLNRIDALVAGSRTNIEDAIQLGLAILPDAMHRR LVLISDGGENAGQALTAARLAAARGVPIEVVILSAERGPDALITALQAPTTADINQNIPLTVQIESEVEGAATVQLIADG QLLAEQSVTVTPGRNQIAFSVPARESGFRRFEARLIAPFDTQPANNRAVAFTFVSGPPRVLLLTVGPEQALALAEAWRAG GIEVTVQTPMQAPANPLDLRSFDAIALVDTPANAVSLALQRTLTTYVRDLGGGLLFIGGPQSFGAGGWRRSLLESLFPVS LDPPSREERFDLALTLVIDRSGSMSELVDGLRTQLDLAREAAFQASLGLSRQDQLSIIAFDSVADVILPLQPLPDLATIE DALSRLSAGGGTNIRSGMALAAETIATADARIRHVILLTDGVSETEYADLVANLRAQGVTVSTVAIGLNTDPELERVAQI GGGKYYVVRQAEALPQILLEETVRVANRDLVEEPFTPALALPTPWLRNFSALPPLQGRNVVAERSISRVLLVADDGSPLL ATAQIGVGRVLAWASDMTGHWATAWLSWSAFPRFAAGLVSEVLPLNSDDYLSLSATVTADRVEIDLQARDRSGLPVELGE IRSRISGLADEVVPDFVQIAPGRYRAITTIDQMGAYLVQVSATDRNGMPLGTVATGLTVNYSPEYGQFAANPGLMTELAA LTGGQVNPPPDLIFAPTERSVYEVWPVTMPLIWLALALLPVDIALRRLFVAVPDWRPVVIRRPQRKPPEAKPSSSAPAPT STLPQSDEERIAALLAAKRRRRRDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 96994; Mature: 96994
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSVVEPAALWLFVLAIPLLGLIWLGRTDLHRRLGRVRLWLLVVVRCLILAALVLAVAG CEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LQIGRPVNATATVFLLDVSDSVSPAQRVATFDFIEQAVATADPDDRMAVIVFGARAMVER HHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHH VAEPPRPLNRIDALVAGSRTNIEDAIQLGLAILPDAMHRRLVLISDGGENAGQALTAARL HCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCCEEEEEECCCCCHHHHHHHHHH AAARGVPIEVVILSAERGPDALITALQAPTTADINQNIPLTVQIESEVEGAATVQLIADG HHHCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC QLLAEQSVTVTPGRNQIAFSVPARESGFRRFEARLIAPFDTQPANNRAVAFTFVSGPPRV CEEECCCEEECCCCCEEEEECCCCHHHHHEEEEEEEECCCCCCCCCCEEEEEEECCCCEE LLLTVGPEQALALAEAWRAGGIEVTVQTPMQAPANPLDLRSFDAIALVDTPANAVSLALQ EEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH RTLTTYVRDLGGGLLFIGGPQSFGAGGWRRSLLESLFPVSLDPPSREERFDLALTLVIDR HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEC SGSMSELVDGLRTQLDLAREAAFQASLGLSRQDQLSIIAFDSVADVILPLQPLPDLATIE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCCCCCHHHHH DALSRLSAGGGTNIRSGMALAAETIATADARIRHVILLTDGVSETEYADLVANLRAQGVT HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCEE VSTVAIGLNTDPELERVAQIGGGKYYVVRQAEALPQILLEETVRVANRDLVEEPFTPALA EEEEEEECCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LPTPWLRNFSALPPLQGRNVVAERSISRVLLVADDGSPLLATAQIGVGRVLAWASDMTGH CCCHHHHCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCC WATAWLSWSAFPRFAAGLVSEVLPLNSDDYLSLSATVTADRVEIDLQARDRSGLPVELGE CEEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEHHH IRSRISGLADEVVPDFVQIAPGRYRAITTIDQMGAYLVQVSATDRNGMPLGTVATGLTVN HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCEEEEEEEECCCCCCCCCHHHCCCEEE YSPEYGQFAANPGLMTELAALTGGQVNPPPDLIFAPTERSVYEVWPVTMPLIWLALALLP ECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHH VDIALRRLFVAVPDWRPVVIRRPQRKPPEAKPSSSAPAPTSTLPQSDEERIAALLAAKRR HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RRRDE HCCCC >Mature Secondary Structure MVLSVVEPAALWLFVLAIPLLGLIWLGRTDLHRRLGRVRLWLLVVVRCLILAALVLAVAG CEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LQIGRPVNATATVFLLDVSDSVSPAQRVATFDFIEQAVATADPDDRMAVIVFGARAMVER HHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHH VAEPPRPLNRIDALVAGSRTNIEDAIQLGLAILPDAMHRRLVLISDGGENAGQALTAARL HCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCCEEEEEECCCCCHHHHHHHHHH AAARGVPIEVVILSAERGPDALITALQAPTTADINQNIPLTVQIESEVEGAATVQLIADG HHHCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECC QLLAEQSVTVTPGRNQIAFSVPARESGFRRFEARLIAPFDTQPANNRAVAFTFVSGPPRV CEEECCCEEECCCCCEEEEECCCCHHHHHEEEEEEEECCCCCCCCCCEEEEEEECCCCEE LLLTVGPEQALALAEAWRAGGIEVTVQTPMQAPANPLDLRSFDAIALVDTPANAVSLALQ EEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH RTLTTYVRDLGGGLLFIGGPQSFGAGGWRRSLLESLFPVSLDPPSREERFDLALTLVIDR HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEC SGSMSELVDGLRTQLDLAREAAFQASLGLSRQDQLSIIAFDSVADVILPLQPLPDLATIE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCCCCCHHHHH DALSRLSAGGGTNIRSGMALAAETIATADARIRHVILLTDGVSETEYADLVANLRAQGVT HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCEE VSTVAIGLNTDPELERVAQIGGGKYYVVRQAEALPQILLEETVRVANRDLVEEPFTPALA EEEEEEECCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LPTPWLRNFSALPPLQGRNVVAERSISRVLLVADDGSPLLATAQIGVGRVLAWASDMTGH CCCHHHHCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHCCCCCC WATAWLSWSAFPRFAAGLVSEVLPLNSDDYLSLSATVTADRVEIDLQARDRSGLPVELGE CEEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEHHH IRSRISGLADEVVPDFVQIAPGRYRAITTIDQMGAYLVQVSATDRNGMPLGTVATGLTVN HHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHCCEEEEEEEECCCCCCCCCHHHCCCEEE YSPEYGQFAANPGLMTELAALTGGQVNPPPDLIFAPTERSVYEVWPVTMPLIWLALALLP ECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHH VDIALRRLFVAVPDWRPVVIRRPQRKPPEAKPSSSAPAPTSTLPQSDEERIAALLAAKRR HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RRRDE HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]