Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526062

Identifier: 222526062

GI number: 222526062

Start: 3475750

End: 3477270

Strand: Reverse

Name: 222526062

Synonym: Chy400_2819

Alternate gene names: NA

Gene position: 3477270-3475750 (Counterclockwise)

Preceding gene: 222526063

Following gene: 222526061

Centisome position: 66.0

GC content: 58.12

Gene sequence:

>1521_bases
ATGAATCTCCGGCCCCGTTTGTTTGCCATTGCCCTGATTTGCATGGCTTTCATTGCCGGGTGTACATCAACACCTCGTGC
TTCAATGCCCTCTGAACCGGTGCTGGCTGCTGCGCCGACGCAACCGGTGATCCCTACCCCGCTTCCGACACCTGTACCGG
TCTACGCCGACGGCACTGAAGTTGCCGGTGTGCCGATTGGTGGCTTGACGGTTGCAGAGGCAGAAGCAGCACTGAGCAGT
GCGCTGTCGGCGAGGGTAACGCCGCTGCGACTGGTTGCCGGTGCATATACGCAGACAATTGAGCCGACGGCAATTAATCT
GCACGCCGACCCGGCTGCATTGCTGGCTGCGGCAGCGCCGGCGTTGGGGAGTAGTACGCCGGTACGTGTACCACTCCAGC
TTAGCTTCGATGAAACAGCCCTCCGTGAGCAGATGACGACGTTTGCTGCCGAGTCGGCTCTGCCACCCCAGGTCACAGTT
ATCACGTCAACTGACGTGTTGTCACGGAGCTTTGCCTACATTCCCGGCCGGGCGATTGATCTCGACCGCTCGCTGGAGAT
TGTGAGCGGCTTGCTACGCCGTGGACGGGCAACCGAACCGATTGCGCTGACTCTTTGGCCGACTACCGAACAGCCGCGTG
CTTCGCTTGAACAACTTACCACCCAGCTCGAAGAAATGGCTGAGGCATGGGATGGTGTGGCTGGGGTTTATCTGTATGAT
CTCGCCACCGGCGCTGAAGTCGCGGTGAATGCGCGCAGTGTCTTCCCCGGCGCCAGCACGATCAAGACGGCTATTATGCT
CTATGCCTACACGAAACTTGAAACCTTTACCGAACGCCAGTGGCGGCGCATGCGCCTCATGATCATCGAGAGTGACAACC
TGGCGGCAAATGACATACTGGCTGCCGGCGCCGGTGGTACCGGTACCGATCTAGCATTTCGCGGTGCCGAAGAGATGAGT
GATATGCTGGCCGATCTTGGTCTGGAATATCTCTATCTCTACGTCCCTTACGAGTCGACCGATTACATCCGGCTGTACAA
CGTCAGGTATCGCTGTGGGCCAAGAGACCCGGTCGGCGAGCCGCCGTATACCGAGACCGGTTGCGCACTGCGGGCAACTC
CTTACGCTATCGGGCAGATCTACCGCATGATTGACGAGTGTGCACGCGGTGAAGGTGTGCTGCTTGAGAAATTTGAACTG
CTCAATCCAGATCGATGTCAGGAGATGCTCGACTTGCTGGCTGAGAATGGCGACAATAGCCGGATGGTTGCCGGTCTGCC
AGAGGGAGTACGGGTCGAGCACAAATCGGGATGGATTGACAACACCCAGGCTGATGCCGGGATTGTACGCTCACCCGGTG
GTGATTATGTGTTGGCCGTGTACGTCTACAAGCCACTGGGAGATCGGGCAGCCTGGCCCGACTCGCTGCTCGGCGGAGCA
ATTGCCGATTTCAGCCGTCTTGTGTACACTGCCTACAATCCAATTCAAATTGATCCGGCTTCACAGGGAGACACACCATG
A

Upstream 100 bases:

>100_bases
CCGGCTACCCGTTAACCTTTTATCTTGAGCCTGATGAACAGTAACGTTTCCGACCTGGTACATGCGTCCCGCATTTTGAA
AGATGGAGTTTTGCCCAACT

Downstream 100 bases:

>100_bases
CCGGTCTACCCATCAAGCGCATGGTGCTCTACAAACACGGTGTTGGCTATTTTGAACGACAGGGCACCTTCAGCGGTGAC
ACCTTAACGCTCACCTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTEVAGVPIGGLTVAEAEAALSS
ALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAPALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTV
ITSTDVLSRSFAYIPGRAIDLDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD
LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDILAAGAGGTGTDLAFRGAEEMS
DMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGEPPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFEL
LNPDRCQEMLDLLAENGDNSRMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA
IADFSRLVYTAYNPIQIDPASQGDTP

Sequences:

>Translated_506_residues
MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTEVAGVPIGGLTVAEAEAALSS
ALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAPALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTV
ITSTDVLSRSFAYIPGRAIDLDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD
LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDILAAGAGGTGTDLAFRGAEEMS
DMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGEPPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFEL
LNPDRCQEMLDLLAENGDNSRMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA
IADFSRLVYTAYNPIQIDPASQGDTP
>Mature_506_residues
MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTEVAGVPIGGLTVAEAEAALSS
ALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAPALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTV
ITSTDVLSRSFAYIPGRAIDLDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD
LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDILAAGAGGTGTDLAFRGAEEMS
DMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGEPPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFEL
LNPDRCQEMLDLLAENGDNSRMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA
IADFSRLVYTAYNPIQIDPASQGDTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54371; Mature: 54371

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCE
VAGVPIGGLTVAEAEAALSSALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAP
ECCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCC
ALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTVITSTDVLSRSFAYIPGRAID
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEC
LDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD
CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDIL
ECCCCEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEE
AAGAGGTGTDLAFRGAEEMSDMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGE
EECCCCCCCCCEECCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCC
PPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFELLNPDRCQEMLDLLAENGDNS
CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCC
RMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA
EEEECCCCCCEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHH
IADFSRLVYTAYNPIQIDPASQGDTP
HHHHHHHHHEECCCEEECCCCCCCCC
>Mature Secondary Structure
MNLRPRLFAIALICMAFIAGCTSTPRASMPSEPVLAAAPTQPVIPTPLPTPVPVYADGTE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCE
VAGVPIGGLTVAEAEAALSSALSARVTPLRLVAGAYTQTIEPTAINLHADPAALLAAAAP
ECCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCC
ALGSSTPVRVPLQLSFDETALREQMTTFAAESALPPQVTVITSTDVLSRSFAYIPGRAID
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEC
LDRSLEIVSGLLRRGRATEPIALTLWPTTEQPRASLEQLTTQLEEMAEAWDGVAGVYLYD
CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
LATGAEVAVNARSVFPGASTIKTAIMLYAYTKLETFTERQWRRMRLMIIESDNLAANDIL
ECCCCEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEE
AAGAGGTGTDLAFRGAEEMSDMLADLGLEYLYLYVPYESTDYIRLYNVRYRCGPRDPVGE
EECCCCCCCCCEECCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCC
PPYTETGCALRATPYAIGQIYRMIDECARGEGVLLEKFELLNPDRCQEMLDLLAENGDNS
CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHCCCCCC
RMVAGLPEGVRVEHKSGWIDNTQADAGIVRSPGGDYVLAVYVYKPLGDRAAWPDSLLGGA
EEEECCCCCCEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHH
IADFSRLVYTAYNPIQIDPASQGDTP
HHHHHHHHHEECCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA