| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525956
Identifier: 222525956
GI number: 222525956
Start: 3347232
End: 3348398
Strand: Reverse
Name: 222525956
Synonym: Chy400_2712
Alternate gene names: NA
Gene position: 3348398-3347232 (Counterclockwise)
Preceding gene: 222525957
Following gene: 222525955
Centisome position: 63.55
GC content: 56.56
Gene sequence:
>1167_bases ATGCCGTTTTATCAGCGTCTCGGTCAGGTCCCTCACAAGCGCCATACCCAGTTCCGTAAGCCCGATGGCAAACTTTACCG CGAAGAGGTAATGGGACTGGAAGGGTTCCACGGAATTCAATCAATCCTCTACCACCACTTTCTACCACCACGGGTGCTCC GCACCGAGTTGATCGGTTCAGCTAAACCAACGTATGTCGATTTCGGCCCGATTCGTCACCGTGCCTTCGCCACCGCGAAT GTGCCTGCCGGCGGTGATGCAGTGAGCGCCCGCGTTACCCTGCTCGGTAATAATGATGTGACGATTGGGATTAGCCGGCC AACGGAAAGCATGACCTTTTTCTACCGCAACGCTCAGGCGTATGAGGTCTGGTTTACCCACGAAGGCAGCGGTGAATTGC TCTCGCAATTTGGCCGCTTGCCCTTCAGCGCCGGTGACTACCTGGTCATTCCCTTCGGCACTACCTGGCAAATGCGGCTG AATGAGCCGGCACGGTTCCTGGTGATTGAGTCGGCCAGCCAGATTGCGCCACCCAAACGCTACCGCAATCAGTTTGGGCA ACTGCTCGAGCACGCCCCCTACTGCGAGCGCGACATCCGTGGCCCAAGTGAATTGCTCACGTTTACCGACACCGGTGAGT TTGAGGTGCGGATCAAGGTGCGTGATCAGCTTACCCGGCATATTCTTGATCATCACCCCTTCGATGTGGTCGGCTGGGAT GGCTATCTCTATCCCTGGGCTTTCTCGATTCACGATTTTGAGCCGATCACCGGACGGATTCACCAGCCACCACCGGTCCA TCAGACGTTTGAGGGGCACAATTTTGTCGTCTGCTCGTTTGTGCCGCGATTGTTCGATTATCACCCGGAAGCAATTCCAG CGCCGTACAATCACTCAAACGTGAATTCTGATGAGGTAATCTATTACTGCGACGGCAACTTTATGTCACGTCGTGGTATC GAGCGCTGCGATATTACGTTGCACCCCGCCGGTCTGCCCCATGGCCCTCAACCGGGCAGCACCGAAGCCAGTATCGGCGC GAAAGAGACTCACGAGCTGGCGGTGATGATTGATACATTCCATCCACTGCACCTGACCGCAGCCGCGCTGGAGCTGGAGA AGGCCGGGTATATGGATTCGTGGAGTGTTGGCGGGCCGGAGGGCTAG
Upstream 100 bases:
>100_bases GTTCGAGTCCCTCCCGGGTCGCCAGATCGCCCGACGCCACGAGCGTCGGGCGTGTATCTCTAGCGTCCAGAACGACACTC GCGGCACAAGGAGGTGTGCG
Downstream 100 bases:
>100_bases GCTGTACCACGCGCAGACCATCGGTACACAGCGCACCGTTACGTCTATCTGGTGATCGGGCAGTCTATCGGGTACTGGTG TGCAATCGTATGGCTGCCCG
Product: homogentisate 12-dioxygenase
Products: 4-maleylacetoacetate
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MPFYQRLGQVPHKRHTQFRKPDGKLYREEVMGLEGFHGIQSILYHHFLPPRVLRTELIGSAKPTYVDFGPIRHRAFATAN VPAGGDAVSARVTLLGNNDVTIGISRPTESMTFFYRNAQAYEVWFTHEGSGELLSQFGRLPFSAGDYLVIPFGTTWQMRL NEPARFLVIESASQIAPPKRYRNQFGQLLEHAPYCERDIRGPSELLTFTDTGEFEVRIKVRDQLTRHILDHHPFDVVGWD GYLYPWAFSIHDFEPITGRIHQPPPVHQTFEGHNFVVCSFVPRLFDYHPEAIPAPYNHSNVNSDEVIYYCDGNFMSRRGI ERCDITLHPAGLPHGPQPGSTEASIGAKETHELAVMIDTFHPLHLTAAALELEKAGYMDSWSVGGPEG
Sequences:
>Translated_388_residues MPFYQRLGQVPHKRHTQFRKPDGKLYREEVMGLEGFHGIQSILYHHFLPPRVLRTELIGSAKPTYVDFGPIRHRAFATAN VPAGGDAVSARVTLLGNNDVTIGISRPTESMTFFYRNAQAYEVWFTHEGSGELLSQFGRLPFSAGDYLVIPFGTTWQMRL NEPARFLVIESASQIAPPKRYRNQFGQLLEHAPYCERDIRGPSELLTFTDTGEFEVRIKVRDQLTRHILDHHPFDVVGWD GYLYPWAFSIHDFEPITGRIHQPPPVHQTFEGHNFVVCSFVPRLFDYHPEAIPAPYNHSNVNSDEVIYYCDGNFMSRRGI ERCDITLHPAGLPHGPQPGSTEASIGAKETHELAVMIDTFHPLHLTAAALELEKAGYMDSWSVGGPEG >Mature_387_residues PFYQRLGQVPHKRHTQFRKPDGKLYREEVMGLEGFHGIQSILYHHFLPPRVLRTELIGSAKPTYVDFGPIRHRAFATANV PAGGDAVSARVTLLGNNDVTIGISRPTESMTFFYRNAQAYEVWFTHEGSGELLSQFGRLPFSAGDYLVIPFGTTWQMRLN EPARFLVIESASQIAPPKRYRNQFGQLLEHAPYCERDIRGPSELLTFTDTGEFEVRIKVRDQLTRHILDHHPFDVVGWDG YLYPWAFSIHDFEPITGRIHQPPPVHQTFEGHNFVVCSFVPRLFDYHPEAIPAPYNHSNVNSDEVIYYCDGNFMSRRGIE RCDITLHPAGLPHGPQPGSTEASIGAKETHELAVMIDTFHPLHLTAAALELEKAGYMDSWSVGGPEG
Specific function: Unknown
COG id: COG3508
COG function: function code Q; Homogentisate 1,2-dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the homogentisate dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR005708 - InterPro: IPR014710 [H]
Pfam domain/function: PF04209 HgmA [H]
EC number: 1.13.11.5
Molecular weight: Translated: 43936; Mature: 43805
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFYQRLGQVPHKRHTQFRKPDGKLYREEVMGLEGFHGIQSILYHHFLPPRVLRTELIGS CCHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCC AKPTYVDFGPIRHRAFATANVPAGGDAVSARVTLLGNNDVTIGISRPTESMTFFYRNAQA CCCCEEECCCCCCCEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCEEEEEECCEE YEVWFTHEGSGELLSQFGRLPFSAGDYLVIPFGTTWQMRLNEPARFLVIESASQIAPPKR EEEEEEECCCHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCHHCCCCHH YRNQFGQLLEHAPYCERDIRGPSELLTFTDTGEFEVRIKVRDQLTRHILDHHPFDVVGWD HHHHHHHHHHHCCCCHHHCCCHHHEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEEECC GYLYPWAFSIHDFEPITGRIHQPPPVHQTFEGHNFVVCSFVPRLFDYHPEAIPAPYNHSN CEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCC VNSDEVIYYCDGNFMSRRGIERCDITLHPAGLPHGPQPGSTEASIGAKETHELAVMIDTF CCCCCEEEEECCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC HPLHLTAAALELEKAGYMDSWSVGGPEG CCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PFYQRLGQVPHKRHTQFRKPDGKLYREEVMGLEGFHGIQSILYHHFLPPRVLRTELIGS CHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCC AKPTYVDFGPIRHRAFATANVPAGGDAVSARVTLLGNNDVTIGISRPTESMTFFYRNAQA CCCCEEECCCCCCCEEEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCEEEEEECCEE YEVWFTHEGSGELLSQFGRLPFSAGDYLVIPFGTTWQMRLNEPARFLVIESASQIAPPKR EEEEEEECCCHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCHHCCCCHH YRNQFGQLLEHAPYCERDIRGPSELLTFTDTGEFEVRIKVRDQLTRHILDHHPFDVVGWD HHHHHHHHHHHCCCCHHHCCCHHHEEEEECCCCEEEEEEHHHHHHHHHHHCCCCEEEECC GYLYPWAFSIHDFEPITGRIHQPPPVHQTFEGHNFVVCSFVPRLFDYHPEAIPAPYNHSN CEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCC VNSDEVIYYCDGNFMSRRGIERCDITLHPAGLPHGPQPGSTEASIGAKETHELAVMIDTF CCCCCEEEEECCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC HPLHLTAAALELEKAGYMDSWSVGGPEG CCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: homogentisate; O2
Specific reaction: homogentisate + O2 = 4-maleylacetoacetate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11427726 [H]