| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yedY [C]
Identifier: 222525928
GI number: 222525928
Start: 3317257
End: 3318189
Strand: Reverse
Name: yedY [C]
Synonym: Chy400_2684
Alternate gene names: 222525928
Gene position: 3318189-3317257 (Counterclockwise)
Preceding gene: 222525935
Following gene: 222525924
Centisome position: 62.98
GC content: 56.06
Gene sequence:
>933_bases ATGTCACTTGACACGATTCCCTTACCAAAGGAAGGCACGCTTTCCAAAGACTATCGGATGCAGGTCACCTGCGAAGAGCC GCCAAACCTCTTGCCACCACTTGCAATTCTTGACGAGGCGGTGACGCCGGTAGAGCGGTTATTTGTATGCAATCACCAGC CCATTCCCTCTCTATCCAGGAAGCATTGGGAACTGACAATCGATGGTCTGGTACGGCATCCGTTGACTATTGGTTTTAGC GATTTGTTCAGGGAACCAACCAGTAGCTTCTTCGCCGCACTCATTGGCAGGTCGCAGATTGCTGAAGGTTACGCCTCGAT TGCGAATGTCGAATGGATCGGTGCACCGGTAGCACTGTTTCTCGAAGCAGCAGGCATGAAGCCCCAGGCCGGGTTCGCCG CCTGTTGGAGCTACGGCCCCCAACCGATGGTGCGTTATTTGCCACTCAGCAAACTCTGGCAAGATGGCATGCTGGCGTAT GCGATCAATGGTCAGCCACTACCACCCCTGCACGGCGGCCCGGTACGACTGATTGTACCGGGATGGAGCAGCGCTTACTG GCTGAAATGGATTGCGCAGATTACGCTCCTTTCACCAGAAAGGGCACCGGCAGCAGCCCATGTCGATGGATCACTGGCAA TTGATTGTTGCCTCTTCAATCTCCCTAATGGTGTGCTCAGGCCTGCCAGATATACCACCCTGCGCGGCGCGGCATGGTCG GCCGCACGTGGTGTTGCCCAGGTAGACATTTCCATCGACGAAGGTCCCTGGCAGACAGCCACCCTCGACCAAAACCTGGG GCCACGCGCCTGGCGACGTTTCTCATTTCGCTGGTCAGCTTCGAGTGGAACGCATCTGCTTGCTGTTCGTGTCAGTGACA ATAGTGGTCAGAGTGCAGTGCGACGCTGGCAGATTGACGTGAGGAGTTCGTGA
Upstream 100 bases:
>100_bases TTTTGTAGTCTGATTGGACGCAACTGTCATCATTTATCCACCCTGAGCCACTATACTACGCACAGCCGAAGTAATTTCCA TAAATGTCTGGACATACGCT
Downstream 100 bases:
>100_bases GAAGCAACGGGGTGATGGCATTATTCACGAATTAACACCACATCTGGTAGCAGAGAAAGCACGCGCTATCCAATCATCAC CCTGGTGTCGCACCTGCACG
Product: molybdopterin binding oxidoreductase
Products: sulfate; ferrocytochrome c
Alternate protein names: Oxidoreductase; Twin-Arginine Translocation Pathway Signal; Membrane-Bound Oxidoreductase; SulfiteCytochrome C Oxidoreductase Subunit A; Nitrate Reductase; Sulfite Dehydrogenase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Sulfite-Dehydrogenase; Molybdopterin Oxidoreductase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Sulfite Oxidase-Like Protein; Sulfur Oxidation Molybdopterin C Protein; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Oxidase-Like Oxidoreductase; Sulfite Dehydrogenase SoxC; Sulfite Oxidase And Related S; Mo-Co Oxidoreductase Dimerisation Domain; Molybdopterin Dependent Oxidoreductase; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Molybdopterin Oxidoreductase Domain-Containing Protein; Oxidase; Sulfite Oxidase Molybdopterin Subunit; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Molybdopterin Oxidoreductase Family Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSLDTIPLPKEGTLSKDYRMQVTCEEPPNLLPPLAILDEAVTPVERLFVCNHQPIPSLSRKHWELTIDGLVRHPLTIGFS DLFREPTSSFFAALIGRSQIAEGYASIANVEWIGAPVALFLEAAGMKPQAGFAACWSYGPQPMVRYLPLSKLWQDGMLAY AINGQPLPPLHGGPVRLIVPGWSSAYWLKWIAQITLLSPERAPAAAHVDGSLAIDCCLFNLPNGVLRPARYTTLRGAAWS AARGVAQVDISIDEGPWQTATLDQNLGPRAWRRFSFRWSASSGTHLLAVRVSDNSGQSAVRRWQIDVRSS
Sequences:
>Translated_310_residues MSLDTIPLPKEGTLSKDYRMQVTCEEPPNLLPPLAILDEAVTPVERLFVCNHQPIPSLSRKHWELTIDGLVRHPLTIGFS DLFREPTSSFFAALIGRSQIAEGYASIANVEWIGAPVALFLEAAGMKPQAGFAACWSYGPQPMVRYLPLSKLWQDGMLAY AINGQPLPPLHGGPVRLIVPGWSSAYWLKWIAQITLLSPERAPAAAHVDGSLAIDCCLFNLPNGVLRPARYTTLRGAAWS AARGVAQVDISIDEGPWQTATLDQNLGPRAWRRFSFRWSASSGTHLLAVRVSDNSGQSAVRRWQIDVRSS >Mature_309_residues SLDTIPLPKEGTLSKDYRMQVTCEEPPNLLPPLAILDEAVTPVERLFVCNHQPIPSLSRKHWELTIDGLVRHPLTIGFSD LFREPTSSFFAALIGRSQIAEGYASIANVEWIGAPVALFLEAAGMKPQAGFAACWSYGPQPMVRYLPLSKLWQDGMLAYA INGQPLPPLHGGPVRLIVPGWSSAYWLKWIAQITLLSPERAPAAAHVDGSLAIDCCLFNLPNGVLRPARYTTLRGAAWSA ARGVAQVDISIDEGPWQTATLDQNLGPRAWRRFSFRWSASSGTHLLAVRVSDNSGQSAVRRWQIDVRSS
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Transmembrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI18859905, Length=298, Percent_Identity=27.1812080536913, Blast_Score=85, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.2.1
Molecular weight: Translated: 34075; Mature: 33944
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDTIPLPKEGTLSKDYRMQVTCEEPPNLLPPLAILDEAVTPVERLFVCNHQPIPSLSR CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCHHHHHEEECCCCCCCCCC KHWELTIDGLVRHPLTIGFSDLFREPTSSFFAALIGRSQIAEGYASIANVEWIGAPVALF CEEEEEECHHHCCCEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHH LEAAGMKPQAGFAACWSYGPQPMVRYLPLSKLWQDGMLAYAINGQPLPPLHGGPVRLIVP HHHCCCCCCCCHHHHHCCCCCHHHHHCCHHHHHHCCEEEEEECCCCCCCCCCCCEEEEEC GWSSAYWLKWIAQITLLSPERAPAAAHVDGSLAIDCCLFNLPNGVLRPARYTTLRGAAWS CCCCHHHHHHHHHHEEECCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCEEEECCCCHH AARGVAQVDISIDEGPWQTATLDQNLGPRAWRRFSFRWSASSGTHLLAVRVSDNSGQSAV HHCCEEEEEEEECCCCCCEEECCCCCCHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCE RRWQIDVRSS EEEEEEECCC >Mature Secondary Structure SLDTIPLPKEGTLSKDYRMQVTCEEPPNLLPPLAILDEAVTPVERLFVCNHQPIPSLSR CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCHHHHHEEECCCCCCCCCC KHWELTIDGLVRHPLTIGFSDLFREPTSSFFAALIGRSQIAEGYASIANVEWIGAPVALF CEEEEEECHHHCCCEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHH LEAAGMKPQAGFAACWSYGPQPMVRYLPLSKLWQDGMLAYAINGQPLPPLHGGPVRLIVP HHHCCCCCCCCHHHHHCCCCCHHHHHCCHHHHHHCCEEEEEECCCCCCCCCCCCEEEEEC GWSSAYWLKWIAQITLLSPERAPAAAHVDGSLAIDCCLFNLPNGVLRPARYTTLRGAAWS CCCCHHHHHHHHHHEEECCCCCCCEEECCCCEEEEEEEEECCCCCCCCCCEEEECCCCHH AARGVAQVDISIDEGPWQTATLDQNLGPRAWRRFSFRWSASSGTHLLAVRVSDNSGQSAV HHCCEEEEEEEECCCCCCEEECCCCCCHHHHHEEEEEEECCCCCEEEEEEECCCCCCCCE RRWQIDVRSS EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sulfite; ferricytochrome c; H2O
Specific reaction: sulfite + 2 ferricytochrome c + H2O = sulfate + 2 ferrocytochrome c
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA