| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is tarA [H]
Identifier: 222525795
GI number: 222525795
Start: 3200087
End: 3200836
Strand: Reverse
Name: tarA [H]
Synonym: Chy400_2548
Alternate gene names: 222525795
Gene position: 3200836-3200087 (Counterclockwise)
Preceding gene: 222525844
Following gene: 222525794
Centisome position: 60.75
GC content: 57.73
Gene sequence:
>750_bases ATGCAGAGCGGTCGGATCACGATACTGGGAATACCGATTGATGATGTCACCGAGGCAGAAGCATTGGAGAGGGCACATAG CTTTCTGCAAGATGGAGGCTGGCATCAGATTTGTACGGTGAACCCGGAATTTATCATGGAGGCACGCCGAAATCCAGCTT TTCGGGCAGTATTGCAGGCAGCAGATCTGAACACGCCGGATGGCTTTGGGGTGCTGGTGGCGGCGCGCTGGCAGGGTACA CCGTTGCGTGGCCGGGTAACGGGGGTTGAATTAACGCTTGGTCTGGCCCAACTCGCCGCAACGCATGGCTATCGCATGTT CTTGCTCGGTGCAGCACCGGGTGTTGCGGAAGCAGCGGCAGTCGTGCTCAGATCGCGGTGGCCGGGGCTGCATATTGTTG GCTGCTATGCCGGCTCACCGGCAGCGGAATATGATGAGCAGCAGCGCCAGATCATTATGCAAGCGCAACCACATATCCTG CTGGTAGCGTATGGTCATCCACGACAAGAGTTGTGGATTGCACGTAACCAGCCATTTATCAAGGTGCCGCTGGCTATCGG TGTGGGCGGTACCTTCGATTATCTGGCCGGCAGGGTACCACGCGCACCACGGTGGCTCCGCCGGATGGGGTTAGAATGGG CATTCCGGTTAGTGATGCAGCCGAGACGTTGGCGGCGTATCATTGATGCTGTTCCAGCATTTCTATGGACTGTCATCTGG GAAGGACGGCGCAGGGAAGAGGTCGGGTAG
Upstream 100 bases:
>100_bases GAGGTTTCATCCACAACGCATACAGGTAATGCAACAAACAGCATTTGTAGCCGGATGCGGTATGATGAGAAGCAATAGCA GATAGAATAACAGGTGCCTG
Downstream 100 bases:
>100_bases AGAAGCTAACTGACACATACGGCGGTCCAGCAGACAGATCAATCACAACGGGTGGGAGCAGTGGTCTGTGTAAGCACGTA TCACAAGGCAATAGTTATGC
Product: WecB/TagA/CpsF family glycosyl transferase
Products: NA
Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MQSGRITILGIPIDDVTEAEALERAHSFLQDGGWHQICTVNPEFIMEARRNPAFRAVLQAADLNTPDGFGVLVAARWQGT PLRGRVTGVELTLGLAQLAATHGYRMFLLGAAPGVAEAAAVVLRSRWPGLHIVGCYAGSPAAEYDEQQRQIIMQAQPHIL LVAYGHPRQELWIARNQPFIKVPLAIGVGGTFDYLAGRVPRAPRWLRRMGLEWAFRLVMQPRRWRRIIDAVPAFLWTVIW EGRRREEVG
Sequences:
>Translated_249_residues MQSGRITILGIPIDDVTEAEALERAHSFLQDGGWHQICTVNPEFIMEARRNPAFRAVLQAADLNTPDGFGVLVAARWQGT PLRGRVTGVELTLGLAQLAATHGYRMFLLGAAPGVAEAAAVVLRSRWPGLHIVGCYAGSPAAEYDEQQRQIIMQAQPHIL LVAYGHPRQELWIARNQPFIKVPLAIGVGGTFDYLAGRVPRAPRWLRRMGLEWAFRLVMQPRRWRRIIDAVPAFLWTVIW EGRRREEVG >Mature_249_residues MQSGRITILGIPIDDVTEAEALERAHSFLQDGGWHQICTVNPEFIMEARRNPAFRAVLQAADLNTPDGFGVLVAARWQGT PLRGRVTGVELTLGLAQLAATHGYRMFLLGAAPGVAEAAAVVLRSRWPGLHIVGCYAGSPAAEYDEQQRQIIMQAQPHIL LVAYGHPRQELWIARNQPFIKVPLAIGVGGTFDYLAGRVPRAPRWLRRMGLEWAFRLVMQPRRWRRIIDAVPAFLWTVIW EGRRREEVG
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=199, Percent_Identity=31.1557788944724, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 27871; Mature: 27871
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSGRITILGIPIDDVTEAEALERAHSFLQDGGWHQICTVNPEFIMEARRNPAFRAVLQA CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHHHHHH ADLNTPDGFGVLVAARWQGTPLRGRVTGVELTLGLAQLAATHGYRMFLLGAAPGVAEAAA HCCCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHCCEEEEEEECCCCHHHHHH VVLRSRWPGLHIVGCYAGSPAAEYDEQQRQIIMQAQPHILLVAYGHPRQELWIARNQPFI HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHEEEECCCCEE KVPLAIGVGGTFDYLAGRVPRAPRWLRRMGLEWAFRLVMQPRRWRRIIDAVPAFLWTVIW EEEEEEECCCCHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EGRRREEVG CCCCCCCCC >Mature Secondary Structure MQSGRITILGIPIDDVTEAEALERAHSFLQDGGWHQICTVNPEFIMEARRNPAFRAVLQA CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCHHHHHHHHH ADLNTPDGFGVLVAARWQGTPLRGRVTGVELTLGLAQLAATHGYRMFLLGAAPGVAEAAA HCCCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHCCEEEEEEECCCCHHHHHH VVLRSRWPGLHIVGCYAGSPAAEYDEQQRQIIMQAQPHILLVAYGHPRQELWIARNQPFI HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHEEEECCCCEE KVPLAIGVGGTFDYLAGRVPRAPRWLRRMGLEWAFRLVMQPRRWRRIIDAVPAFLWTVIW EEEEEEECCCCHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EGRRREEVG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]