| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525743
Identifier: 222525743
GI number: 222525743
Start: 3136081
End: 3137049
Strand: Direct
Name: 222525743
Synonym: Chy400_2494
Alternate gene names: NA
Gene position: 3136081-3137049 (Clockwise)
Preceding gene: 222525742
Following gene: 222525751
Centisome position: 59.52
GC content: 57.17
Gene sequence:
>969_bases ATGTCCGAGACCAATGATCGTGTGCGGAGCAAAGCTGCTCGTCTCCGCCGCATTGAACACCAGCTCTACAACGCCCCCGA TGGGCTGAGTGTGGTTGACCTGGCTCGACTATGTGGTGTCAATCGGCGCACCATCTATCGCGATCTCGACATTCTGAGCG AGAGTGGTGCGCCGATCTGGCAGCACAACGGCAAGTACGGGATCGACCGCAATGCCTATCTGGCAACGATCCGTCTAAAC CTCAATGAAGCCGTTGCGCTGTTCTTTGCTGCTCGCCTCCTGAGCCATCACAGCGACGAACACAATCCCCATATTGTCTC GGCCCTCGATCAACTGGCCGCCGGTCTCCCTGATCAGACGATTGCCGGTCATATCGCCCGCCTCGCCAATCTTGTTCGCG AACGGCCACCCAGTCCGCGTTACGTCGAAATCCTCGAACGACTGACCCGAGCCTGGGCAGATCGGCGCATGGTGCGGATC CGCTATCGAGCGCCTAACCGACCGGCAACCGAACGTGATATTGCCCCTTATTTTCTTGAAGTTGTGCGCATGACACCGGG CCTGTACGTCATCGGCTATGATCGTCTCCGTGATGATGTGCGCACCTTCAAGGTTGAGCGCATCGAACACGCTGAGTTAC TCGACGAGCATTACCACATTCCTGAAGGCTTCGATCCATACGACCATCTGGCGCGGGCATGGGCCGTTATGAGCGAAGCC GAAGTCACGATTCATCTGCGTTTCACCCCTCAGGTTGCACCCCGCATTCGCGAAAATCGCTGGCACCATAGCCAGCAGCT CATCGACAATGCTGATGGCGGTTGCGATCTTCACCTCACTGTCGGCGGTATTCGCGAGATTTTGAGTTGGGTCTTGAGCT GGGGCGCCGATGTTGAGGTATTGGCGCCAGAAGAATTGCGTAACGAAGTGATCAACCACGCTCGCCAGATGCTGGCGCGC TATGTGTGA
Upstream 100 bases:
>100_bases GCCGTGAGTATGCCGATGTACGCCGTGATCTGTTTTGGATCACCGTGTGGGGCGGACTACTCATAATTGGGATGATAGTC GCTTCATTTGTATTGTAGAT
Downstream 100 bases:
>100_bases TCTGGCGGTCCAGGTCGAAGAGTCTAGAACTTATTTCATAAAAAGCTGTACTATCGCACTCTAATAACCATCTCCAGTGC CATCACGCGCTGAATTGGTT
Product: Helix-turn-helix type 11 domain-containing protein
Products: NA
Alternate protein names: Transcriptional Regulator; Regulatory Protein DeoR; Transcriptional Regulator-Like Protein; GntR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator Protein-Like Protein; Transcription Regulator; DeoR Family Transcriptional Regulator; HTH-Type Transcriptional Regulator YobV; HTH Domain Protein; Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator-Like; Metal Dependent Phosphohydrolase; DNA-Bind Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; Regulatory Protein Deor; HTH Type; Deor Family Transcritional Regulator
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIWQHNGKYGIDRNAYLATIRLN LNEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQTIAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRI RYRAPNRPATERDIAPYFLEVVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEA EVTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEVLAPEELRNEVINHARQMLAR YV
Sequences:
>Translated_322_residues MSETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIWQHNGKYGIDRNAYLATIRLN LNEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQTIAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRI RYRAPNRPATERDIAPYFLEVVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEA EVTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEVLAPEELRNEVINHARQMLAR YV >Mature_321_residues SETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIWQHNGKYGIDRNAYLATIRLNL NEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQTIAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRIR YRAPNRPATERDIAPYFLEVVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEAE VTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEVLAPEELRNEVINHARQMLARY V
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37135; Mature: 37004
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIW CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCE QHNGKYGIDRNAYLATIRLNLNEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQT ECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH IAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRIRYRAPNRPATERDIAPYFLE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHH VVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEA HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC EVTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEV EEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEE LAPEELRNEVINHARQMLARYV ECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIW CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCE QHNGKYGIDRNAYLATIRLNLNEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQT ECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH IAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRIRYRAPNRPATERDIAPYFLE HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHH VVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEA HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC EVTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEV EEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEE LAPEELRNEVINHARQMLARYV ECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA