| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525691
Identifier: 222525691
GI number: 222525691
Start: 3082930
End: 3084084
Strand: Reverse
Name: 222525691
Synonym: Chy400_2442
Alternate gene names: NA
Gene position: 3084084-3082930 (Counterclockwise)
Preceding gene: 222525702
Following gene: 222525689
Centisome position: 58.53
GC content: 54.2
Gene sequence:
>1155_bases ATGAACACGTTTCCTGCAGTGCTGATCGGCGGCCCTCCACACAGCGGCAAATCTGTTTTGACGTACCTGCTCACGCAGTA CCTTCGTCAGCGAGGCATCGAACATTATGTTTTGCGTGCATGTCCTGATGGTGAAGGTGACTGGAGCCAGGAGTCAACAC CCGATCTGGTGCGCTTGCTACGGCAGAAAGGGGCATTTGATCGGACGTTTGTTGATCGGGTTTGTCGCGATATAGAACAG CGCCATTTGCCGCTGCTGGTGGATGTAGGAGGACGGCCTACGCTCGATCAGGAACGGATTATCCAGAGGTGCACACACGC CATTGTACTTTCAGCCACCCCGCAGGGAATGGACGAATGGCGTAACCGTGTTGAGCAATATGGATTGATTATTGTTGCAG AATTGCACTCAGAATTGCACGGGAGCGATCAGATTGAGGTTGAAAAACCGGTGCTGCGTGGGGTGATTAGTGGTCTTGAA CGGAATGCCCCGACCGGTGGGATAGTAGTAGAGGCATTGGCCAACCGGCTTGCCCGCCTGATGCATTACGACCAGGCTGA ACTGGTACAGCAGCATTTGCAGCGAGCGCCTGCGGAACTCGTGGTTGATCTTGATCGGCTTGCCAGGCAGATGTGGGTAG AGGCCACGCAGCGTAGATGGATACCACCTGATCTTCCACAGATTCTGGATAGTATTCCGGCAAAAACGCCCCTTGCTATC TATGGACGTGGCCCAAACTGGCTCTATGCAGCACTGGCAGGCCACACTGCCCCTGCGCCATTCTCCCTCTTCGATCCCCG GCTCGGTTGGGCGCAGGCCCAATCCCTGCGGCGTGTGCCACAACCTGTGGCTGATGTTATTCGCTGGCAGACCAGAGAAG AGCAGGATTATACCCTGCTGAAAGCACATCTGTTAGAACCGTATCTCGATTACGATGATTTGTCTGCCCTGACGGTGCCG CGGCTTGATCCACAACGGGGAGTAGTAGTGAGCGGTAAATTGCCCTTCTGGCTGCTCACCAGCCTGATCGTAACCTACCA TGAACATCCGTGGCTGGCAGTTATTCAGCCACAACTCAATCCTAACAGCGTCATTATCTTTAGTCGATGCGAGGATTATC GCCCCGGCAATAGTATCCAGGTTGTGCTTGATTAG
Upstream 100 bases:
>100_bases CGATGGGTCTGTTGGCAAAACAATGTCTGGCATATCTATTAAATATCGGCAATAATGATGTTGATTATTGTAGCATCATT CTTTGGGTTTGGATGGAAAG
Downstream 100 bases:
>100_bases AAGGTAGCTCATACACCGTGTAAAGCTGTGCGATGGCAGGTATGTCCTATCCATCAACGGGCAACCTGCTACGTCGCCAG CGTATATGCTGCCGGTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MNTFPAVLIGGPPHSGKSVLTYLLTQYLRQRGIEHYVLRACPDGEGDWSQESTPDLVRLLRQKGAFDRTFVDRVCRDIEQ RHLPLLVDVGGRPTLDQERIIQRCTHAIVLSATPQGMDEWRNRVEQYGLIIVAELHSELHGSDQIEVEKPVLRGVISGLE RNAPTGGIVVEALANRLARLMHYDQAELVQQHLQRAPAELVVDLDRLARQMWVEATQRRWIPPDLPQILDSIPAKTPLAI YGRGPNWLYAALAGHTAPAPFSLFDPRLGWAQAQSLRRVPQPVADVIRWQTREEQDYTLLKAHLLEPYLDYDDLSALTVP RLDPQRGVVVSGKLPFWLLTSLIVTYHEHPWLAVIQPQLNPNSVIIFSRCEDYRPGNSIQVVLD
Sequences:
>Translated_384_residues MNTFPAVLIGGPPHSGKSVLTYLLTQYLRQRGIEHYVLRACPDGEGDWSQESTPDLVRLLRQKGAFDRTFVDRVCRDIEQ RHLPLLVDVGGRPTLDQERIIQRCTHAIVLSATPQGMDEWRNRVEQYGLIIVAELHSELHGSDQIEVEKPVLRGVISGLE RNAPTGGIVVEALANRLARLMHYDQAELVQQHLQRAPAELVVDLDRLARQMWVEATQRRWIPPDLPQILDSIPAKTPLAI YGRGPNWLYAALAGHTAPAPFSLFDPRLGWAQAQSLRRVPQPVADVIRWQTREEQDYTLLKAHLLEPYLDYDDLSALTVP RLDPQRGVVVSGKLPFWLLTSLIVTYHEHPWLAVIQPQLNPNSVIIFSRCEDYRPGNSIQVVLD >Mature_384_residues MNTFPAVLIGGPPHSGKSVLTYLLTQYLRQRGIEHYVLRACPDGEGDWSQESTPDLVRLLRQKGAFDRTFVDRVCRDIEQ RHLPLLVDVGGRPTLDQERIIQRCTHAIVLSATPQGMDEWRNRVEQYGLIIVAELHSELHGSDQIEVEKPVLRGVISGLE RNAPTGGIVVEALANRLARLMHYDQAELVQQHLQRAPAELVVDLDRLARQMWVEATQRRWIPPDLPQILDSIPAKTPLAI YGRGPNWLYAALAGHTAPAPFSLFDPRLGWAQAQSLRRVPQPVADVIRWQTREEQDYTLLKAHLLEPYLDYDDLSALTVP RLDPQRGVVVSGKLPFWLLTSLIVTYHEHPWLAVIQPQLNPNSVIIFSRCEDYRPGNSIQVVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43528; Mature: 43528
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFPAVLIGGPPHSGKSVLTYLLTQYLRQRGIEHYVLRACPDGEGDWSQESTPDLVRLL CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEHEECCCCCCCCCCCCCHHHHHHH RQKGAFDRTFVDRVCRDIEQRHLPLLVDVGGRPTLDQERIIQRCTHAIVLSATPQGMDEW HHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHEEEECCCCCHHHH RNRVEQYGLIIVAELHSELHGSDQIEVEKPVLRGVISGLERNAPTGGIVVEALANRLARL HHHHHHCCEEEEEEHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MHYDQAELVQQHLQRAPAELVVDLDRLARQMWVEATQRRWIPPDLPQILDSIPAKTPLAI HCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEE YGRGPNWLYAALAGHTAPAPFSLFDPRLGWAQAQSLRRVPQPVADVIRWQTREEQDYTLL EECCCCEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHH KAHLLEPYLDYDDLSALTVPRLDPQRGVVVSGKLPFWLLTSLIVTYHEHPWLAVIQPQLN HHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCC PNSVIIFSRCEDYRPGNSIQVVLD CCCEEEEECCCCCCCCCCEEEEEC >Mature Secondary Structure MNTFPAVLIGGPPHSGKSVLTYLLTQYLRQRGIEHYVLRACPDGEGDWSQESTPDLVRLL CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEHEECCCCCCCCCCCCCHHHHHHH RQKGAFDRTFVDRVCRDIEQRHLPLLVDVGGRPTLDQERIIQRCTHAIVLSATPQGMDEW HHCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHEEEECCCCCHHHH RNRVEQYGLIIVAELHSELHGSDQIEVEKPVLRGVISGLERNAPTGGIVVEALANRLARL HHHHHHCCEEEEEEHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MHYDQAELVQQHLQRAPAELVVDLDRLARQMWVEATQRRWIPPDLPQILDSIPAKTPLAI HCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEE YGRGPNWLYAALAGHTAPAPFSLFDPRLGWAQAQSLRRVPQPVADVIRWQTREEQDYTLL EECCCCEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHH KAHLLEPYLDYDDLSALTVPRLDPQRGVVVSGKLPFWLLTSLIVTYHEHPWLAVIQPQLN HHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCC PNSVIIFSRCEDYRPGNSIQVVLD CCCEEEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA