| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525669
Identifier: 222525669
GI number: 222525669
Start: 3050459
End: 3050959
Strand: Reverse
Name: 222525669
Synonym: Chy400_2420
Alternate gene names: NA
Gene position: 3050959-3050459 (Counterclockwise)
Preceding gene: 222525674
Following gene: 222525668
Centisome position: 57.9
GC content: 56.69
Gene sequence:
>501_bases ATGACCTGGCAGTTAGCGCAGCGTAATCCCGAACGTCTGACCATTCACTTTATTCCCTGGCTAACCTGGAGTTTTGTTGG CCTGGTGGCTTACGGTGTAGGCACCATCGTGCAGTCAATCGTTGCTGGCAACCAACCATTGACCAGCGGTACTGCCATCG CCGTTGCTCTGCTCGTTGGCATGGCATTCTTTGCCCTGATCACCGGTGGTCAGTTGGGGATTTGCCAGATTGACTATCGT CGCAAACTGGTGACAGTTACCTCGTATGGGCTACTCGGACGCAGGCACCAGGAACGTCAGCTCACCGATGTCAAGGGGTT AGAAGTTCGCGTCTTGCGCCGGGCACAATATCGGCTGCTCCTGGCCCTTCGTTCGGGAGAACGCTTACCGCTGGCCCCAT TTTATCTGATTAGCTTCAGCGATCAGGGCATTCGCCGCATCGCCGAAGCCCTGAACGTCGAGCCAGAACTGATCCCGGAG AAGCCTGGCGGGCGCAGATAG
Upstream 100 bases:
>100_bases TGCTGTGTGATGGTCACGATCATGGAGACGGTCAGTAATGAATGAGATAACTTCTAACCTGATATAATGGCAATAGCGAC AGTACACATAGGTGAACAGT
Downstream 100 bases:
>100_bases CGCCCGGCATGACAATACTGAAGTCACGCTATGATCCCTCTACAACTGGCCCTGCGCAACTTTATGTGCTACCGCGCCAC CGAAAATGGTGATCCGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTWQLAQRNPERLTIHFIPWLTWSFVGLVAYGVGTIVQSIVAGNQPLTSGTAIAVALLVGMAFFALITGGQLGICQIDYR RKLVTVTSYGLLGRRHQERQLTDVKGLEVRVLRRAQYRLLLALRSGERLPLAPFYLISFSDQGIRRIAEALNVEPELIPE KPGGRR
Sequences:
>Translated_166_residues MTWQLAQRNPERLTIHFIPWLTWSFVGLVAYGVGTIVQSIVAGNQPLTSGTAIAVALLVGMAFFALITGGQLGICQIDYR RKLVTVTSYGLLGRRHQERQLTDVKGLEVRVLRRAQYRLLLALRSGERLPLAPFYLISFSDQGIRRIAEALNVEPELIPE KPGGRR >Mature_165_residues TWQLAQRNPERLTIHFIPWLTWSFVGLVAYGVGTIVQSIVAGNQPLTSGTAIAVALLVGMAFFALITGGQLGICQIDYRR KLVTVTSYGLLGRRHQERQLTDVKGLEVRVLRRAQYRLLLALRSGERLPLAPFYLISFSDQGIRRIAEALNVEPELIPEK PGGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18554; Mature: 18423
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWQLAQRNPERLTIHFIPWLTWSFVGLVAYGVGTIVQSIVAGNQPLTSGTAIAVALLVG CCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH MAFFALITGGQLGICQIDYRRKLVTVTSYGLLGRRHQERQLTDVKGLEVRVLRRAQYRLL HHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHE LALRSGERLPLAPFYLISFSDQGIRRIAEALNVEPELIPEKPGGRR EEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TWQLAQRNPERLTIHFIPWLTWSFVGLVAYGVGTIVQSIVAGNQPLTSGTAIAVALLVG CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH MAFFALITGGQLGICQIDYRRKLVTVTSYGLLGRRHQERQLTDVKGLEVRVLRRAQYRLL HHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHE LALRSGERLPLAPFYLISFSDQGIRRIAEALNVEPELIPEKPGGRR EEECCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA