| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525666
Identifier: 222525666
GI number: 222525666
Start: 3046240
End: 3047127
Strand: Reverse
Name: 222525666
Synonym: Chy400_2417
Alternate gene names: NA
Gene position: 3047127-3046240 (Counterclockwise)
Preceding gene: 222525667
Following gene: 222525664
Centisome position: 57.83
GC content: 60.14
Gene sequence:
>888_bases ATGCCATTTCGCATTCTCCACATCTCCGACATCCATACCGGCCCACCGTTCAATCCCGCTGCCGCTGAACGGCTGATCGC CGACGCTCACGCACTAAACCCCGATCTCCTCGTTATCTCAGGGGATTTTGTGCAACGCGCCGATTTCTCTCGCCAATGGC AGGCCGCCTGTGAGCTACGCCGTCGTCTACCGCAGCCACAACTGGTCGTGGCCGGCAATCACGATGTCCCCCTCTTCCTG CTCCACGAGCGGCTGTTCAGACCATTCGACCGCTATCGTCGCTATATCACGCCTGATCTGAACCCGGTCTTCACCGCACC CGGCATCGCCGTGATTGGGGCATGCACCGCGCATGGCTGGACGATTGACGGCGGCAGGCTCAATCGCGACCAGATGCAGA CACTACGCAGCCAGCTTGCCGGTCTCGCTGCCGACACCTACAAAGTTGTGGTCTGGCATCATCCGGTTGGCTTTCCGCCT GCGTACCAGCGCAAACGCCCCCTGGTTGCCAATGCCGGCGAAGCGATGCAACTTCTCGCCGAATTTGCCGTCGATCTGTT GCTGTGTGGGCATCTCCATCTAAGCTTTGTCGGCAATACCCGTGATTTTCTACCCGAACTCCGGCATGGCACCTACATCG TACAGAGCGGTACAACAACATCGCGCCGCGGCTACGGCGACGAGCACGGCGCGAATACCTGCAATCTAATCACTATCGAG GCTGATGGCGCCCGTGTCCAGCACCTCCGTTTTGATCAACGCAGCACCGGCTTCCAACCGGTCGCCGAACACTGGCTACC GCGTCCCAACACCACCGGCAGCGATCATCACCACGTAACACCGGCAAACAGATCGTCTTCACGCACATCGGGCGTCGCCG GCGGATAG
Upstream 100 bases:
>100_bases CGCAATCGAACTCCTGCTCATCGTGCGCGCCATTGTCCGTCTTGCTCGCGAGAAGGCTCGTGCCGGCGATACCACATCCT CAACCAGCGGAGAGTAAACT
Downstream 100 bases:
>100_bases GCACGCATAAACGTATCTGTCCGCCCCAGCAAACTCAACACCTTACTCAGCGGGCCACGGGTCAGTGGCCCACCGGCTCC CTGGCTGACGTGAGCCAGCG
Product: metallophosphoesterase
Products: nucleoside 5'-phosphate
Alternate protein names: Phosphohydrolase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; DNA Repair Exonuclease; Ser/Thr Protein Phosphatase Family Protein; Icc Related Protein; Transcriptional Regulator Icc Related Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; Calcineurin Superfamily Phosphohydrolase; Metallo-Phosphoesterase; Calcineurin-Like Phosphoesterase Family; Metallophosphoesterase Protein; Phosphodiesterase; LacZ Expression Regulatory Protein
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MPFRILHISDIHTGPPFNPAAAERLIADAHALNPDLLVISGDFVQRADFSRQWQAACELRRRLPQPQLVVAGNHDVPLFL LHERLFRPFDRYRRYITPDLNPVFTAPGIAVIGACTAHGWTIDGGRLNRDQMQTLRSQLAGLAADTYKVVVWHHPVGFPP AYQRKRPLVANAGEAMQLLAEFAVDLLLCGHLHLSFVGNTRDFLPELRHGTYIVQSGTTTSRRGYGDEHGANTCNLITIE ADGARVQHLRFDQRSTGFQPVAEHWLPRPNTTGSDHHHVTPANRSSSRTSGVAGG
Sequences:
>Translated_295_residues MPFRILHISDIHTGPPFNPAAAERLIADAHALNPDLLVISGDFVQRADFSRQWQAACELRRRLPQPQLVVAGNHDVPLFL LHERLFRPFDRYRRYITPDLNPVFTAPGIAVIGACTAHGWTIDGGRLNRDQMQTLRSQLAGLAADTYKVVVWHHPVGFPP AYQRKRPLVANAGEAMQLLAEFAVDLLLCGHLHLSFVGNTRDFLPELRHGTYIVQSGTTTSRRGYGDEHGANTCNLITIE ADGARVQHLRFDQRSTGFQPVAEHWLPRPNTTGSDHHHVTPANRSSSRTSGVAGG >Mature_294_residues PFRILHISDIHTGPPFNPAAAERLIADAHALNPDLLVISGDFVQRADFSRQWQAACELRRRLPQPQLVVAGNHDVPLFLL HERLFRPFDRYRRYITPDLNPVFTAPGIAVIGACTAHGWTIDGGRLNRDQMQTLRSQLAGLAADTYKVVVWHHPVGFPPA YQRKRPLVANAGEAMQLLAEFAVDLLLCGHLHLSFVGNTRDFLPELRHGTYIVQSGTTTSRRGYGDEHGANTCNLITIEA DGARVQHLRFDQRSTGFQPVAEHWLPRPNTTGSDHHHVTPANRSSSRTSGVAGG
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.4.17
Molecular weight: Translated: 32740; Mature: 32609
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRILHISDIHTGPPFNPAAAERLIADAHALNPDLLVISGDFVQRADFSRQWQAACELR CCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHHHHHHH RRLPQPQLVVAGNHDVPLFLLHERLFRPFDRYRRYITPDLNPVFTAPGIAVIGACTAHGW HHCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCE TIDGGRLNRDQMQTLRSQLAGLAADTYKVVVWHHPVGFPPAYQRKRPLVANAGEAMQLLA EECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHH EFAVDLLLCGHLHLSFVGNTRDFLPELRHGTYIVQSGTTTSRRGYGDEHGANTCNLITIE HHHHHHHHHHHHEEEEECCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEE ADGARVQHLRFDQRSTGFQPVAEHWLPRPNTTGSDHHHVTPANRSSSRTSGVAGG CCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure PFRILHISDIHTGPPFNPAAAERLIADAHALNPDLLVISGDFVQRADFSRQWQAACELR CEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHHHHHHH RRLPQPQLVVAGNHDVPLFLLHERLFRPFDRYRRYITPDLNPVFTAPGIAVIGACTAHGW HHCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCE TIDGGRLNRDQMQTLRSQLAGLAADTYKVVVWHHPVGFPPAYQRKRPLVANAGEAMQLLA EECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHH EFAVDLLLCGHLHLSFVGNTRDFLPELRHGTYIVQSGTTTSRRGYGDEHGANTCNLITIE HHHHHHHHHHHHEEEEECCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEE ADGARVQHLRFDQRSTGFQPVAEHWLPRPNTTGSDHHHVTPANRSSSRTSGVAGG CCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nucleoside 3',5'-cyclic phosphate; H2O
Specific reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA