Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525655

Identifier: 222525655

GI number: 222525655

Start: 3032617

End: 3034236

Strand: Direct

Name: 222525655

Synonym: Chy400_2406

Alternate gene names: NA

Gene position: 3032617-3034236 (Clockwise)

Preceding gene: 222525654

Following gene: 222525656

Centisome position: 57.56

GC content: 56.6

Gene sequence:

>1620_bases
ATGGCTGTAACGGATACGAGCAATGATATTCAGCTCTTGTTAGCAACGCTGCCGCCGGCGATTAGCGAGGCGATTCGGAA
GGCAAATGATCAGGATAATTTGCTCGAAATTGTGATGGATTTGGGACGCCTGCCAGAAGCCCGGTATCGCGGTCACGAGC
TGTTCCTGAGTGATCGTGAAGTGACGTCCGAAGACATCCAATATGTGATCGAGCGTATTGGTGAATTTGGTGAAGATAAT
CGCGCAGGTATTCCGCGTACTCTGCACCGCATCTCTGGGATTCGCAACCGCCGTGGGGTGGTGATTGGTCTGACCTGCCG
CGTTGGGCGGGCGGTGTATGGGACGGTTGATATTATTCGTGATCTGGTCGAGACCGGTCAGAGTATTCTGCTGTTAGGGA
AACCGGGTACCGGCAAGACAACCCTGTTACGCGAGACGGCGCGTGTCCTGGGTGATGAACTGCGGAAGCGGGTAGTGATT
GTGGATACCTCAAATGAGATTGCCGGTGATGGTGATATTCCCCATCCCGGTATTGGGCGGGCCCGCCGGATGCAGGTGCC
ACGACCTGCCGAACAGCATAACGTGATGATCGAGGCGGTCGAAAACCACATGCCGGAAGTGATCGTCATTGATGAGATCG
GTACTGAGCTGGAGGCGGCAGCAGCCCGTACTATCGCTGAGCGCGGCGTTCAGTTGGTCGGGACAGCGCACGGGAATACA
CTTGATAATCTTATGGTCAATCCAACGCTGTCCGACCTGGTCGGTGGTATTCAGGCAGTGACCCTGGGTGATGAAGAGGC
CCGGCGCCGTGGCACGCAGAAGACGGTGTTAGAGCGGAAGGCGCCACCGACCTTCAGCATTCTGGTTGAGATTCAGTCCT
GGGATAGGGTGATGGTCTATCCCGATGTTGCGGCAGCCGTCGATGCGATTTTGCGCGGTGAAGACCCTCCCTGCGAACAG
CGCTTCCGTGATGCAAACGGTGTGGTCCACCGGGAACCGGTGCGACGGGCGCCAATTGATGCCCCGGCATTTGGTCTGCG
GCGCGGTCGTGGTGGCCGTGAACAAGGCCAGATGGGTGGTAGCGGTCCCCGCTTACGTGATCGCAATGGCTCCGCTTCCT
CCACACTAACAATGCCACCACAGCGCATCTTTCCATTCGGCGTCAGTCGTAACCGGTTGCAAAGCGCGATTGAACGCCTG
CGAGTGCCGGCGGTGATTGTACGTGATTTGAAAGAGGCTACTCTGGTCATGACGCTGAAAAACTACTACCGGCAAAGTTC
GCAACAGTTGCGGCAGGCGGAAGAGCAGGGTGTGCCGGTCTATGTGTTGCGCAATAATACGATTACCCAGATGGAACGAC
AGCTCGCCCAGGTCTTCCAGTTACGCGAGCTGGTTGACGATGAACCAGCGCCCTTTGGCAACGATTCGGTGGTTGAAGAG
GCGTTGCTGGAAACGGAGCAGGCGATTACGCAGGTGATTAATGGCGAGCGGAACGCAGTAGAGTTAACGCCGCGCAGCAG
CTATATTCGTCGCTTGCAACATCAGATGGCTGATCGGTATAATCTGCGCTCGGAGAGTCGGGGTGATGATCCTAACCGAC
GGGTGAAGATCTTCCGGTAG

Upstream 100 bases:

>100_bases
AGCGGTACTGGCACCATCGCTAGAGGTTGGGTTGGAGCCGAGAGTGTCAGTGCGTCGGTATGTGTTGCCACCAACTGCAC
GGGAGGAGTGCTAAGCAGGT

Downstream 100 bases:

>100_bases
CAGATCGACAGATTGCTGAAGATCGGCTATCCTTAACGAAGGTTAAACCGTCATTGCTGGTAGCGATTTCATGAAACAAG
GGTTCTTTATCACATTTGAA

Product: single-stranded nucleic acid binding R3H domain-containing protein

Products: NA

Alternate protein names: AAA ATPase; R3H Domain Protein; ATPase; R3H Domain-Containing Protein; AAA ATPase Superfamily Protein; ATPase-Like Protein; AAA ATPase Central Domain Protein; Sporulation Stage III Protein AA; ATPase Like Protein

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MAVTDTSNDIQLLLATLPPAISEAIRKANDQDNLLEIVMDLGRLPEARYRGHELFLSDREVTSEDIQYVIERIGEFGEDN
RAGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVDIIRDLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVI
VDTSNEIAGDGDIPHPGIGRARRMQVPRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNT
LDNLMVNPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDRVMVYPDVAAAVDAILRGEDPPCEQ
RFRDANGVVHREPVRRAPIDAPAFGLRRGRGGREQGQMGGSGPRLRDRNGSASSTLTMPPQRIFPFGVSRNRLQSAIERL
RVPAVIVRDLKEATLVMTLKNYYRQSSQQLRQAEEQGVPVYVLRNNTITQMERQLAQVFQLRELVDDEPAPFGNDSVVEE
ALLETEQAITQVINGERNAVELTPRSSYIRRLQHQMADRYNLRSESRGDDPNRRVKIFR

Sequences:

>Translated_539_residues
MAVTDTSNDIQLLLATLPPAISEAIRKANDQDNLLEIVMDLGRLPEARYRGHELFLSDREVTSEDIQYVIERIGEFGEDN
RAGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVDIIRDLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVI
VDTSNEIAGDGDIPHPGIGRARRMQVPRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNT
LDNLMVNPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDRVMVYPDVAAAVDAILRGEDPPCEQ
RFRDANGVVHREPVRRAPIDAPAFGLRRGRGGREQGQMGGSGPRLRDRNGSASSTLTMPPQRIFPFGVSRNRLQSAIERL
RVPAVIVRDLKEATLVMTLKNYYRQSSQQLRQAEEQGVPVYVLRNNTITQMERQLAQVFQLRELVDDEPAPFGNDSVVEE
ALLETEQAITQVINGERNAVELTPRSSYIRRLQHQMADRYNLRSESRGDDPNRRVKIFR
>Mature_538_residues
AVTDTSNDIQLLLATLPPAISEAIRKANDQDNLLEIVMDLGRLPEARYRGHELFLSDREVTSEDIQYVIERIGEFGEDNR
AGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVDIIRDLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVIV
DTSNEIAGDGDIPHPGIGRARRMQVPRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNTL
DNLMVNPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDRVMVYPDVAAAVDAILRGEDPPCEQR
FRDANGVVHREPVRRAPIDAPAFGLRRGRGGREQGQMGGSGPRLRDRNGSASSTLTMPPQRIFPFGVSRNRLQSAIERLR
VPAVIVRDLKEATLVMTLKNYYRQSSQQLRQAEEQGVPVYVLRNNTITQMERQLAQVFQLRELVDDEPAPFGNDSVVEEA
LLETEQAITQVINGERNAVELTPRSSYIRRLQHQMADRYNLRSESRGDDPNRRVKIFR

Specific function: Unknown

COG id: COG3854

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60090; Mature: 59959

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS51061 R3H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTDTSNDIQLLLATLPPAISEAIRKANDQDNLLEIVMDLGRLPEARYRGHELFLSDRE
CCCCCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCEEEECCCC
VTSEDIQYVIERIGEFGEDNRAGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVDIIR
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHH
DLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVIVDTSNEIAGDGDIPHPGIGR
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCC
ARRMQVPRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNT
HHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCC
LDNLMVNPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDRVMVY
HHHEEECCCHHHHHCCCEEEEECCHHHHHCCCHHHHHHCCCCCCEEEEEEEECCCEEEEC
PDVAAAVDAILRGEDPPCEQRFRDANGVVHREPVRRAPIDAPAFGLRRGRGGREQGQMGG
CCHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCHHCCCCCCCCHHHHCCCCCCCCCCCCC
SGPRLRDRNGSASSTLTMPPQRIFPFGVSRNRLQSAIERLRVPAVIVRDLKEATLVMTLK
CCCCCCCCCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
NYYRQSSQQLRQAEEQGVPVYVLRNNTITQMERQLAQVFQLRELVDDEPAPFGNDSVVEE
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
ALLETEQAITQVINGERNAVELTPRSSYIRRLQHQMADRYNLRSESRGDDPNRRVKIFR
HHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
AVTDTSNDIQLLLATLPPAISEAIRKANDQDNLLEIVMDLGRLPEARYRGHELFLSDRE
CCCCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCEEEECCCC
VTSEDIQYVIERIGEFGEDNRAGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVDIIR
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHH
DLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVIVDTSNEIAGDGDIPHPGIGR
HHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCC
ARRMQVPRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNT
HHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCC
LDNLMVNPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDRVMVY
HHHEEECCCHHHHHCCCEEEEECCHHHHHCCCHHHHHHCCCCCCEEEEEEEECCCEEEEC
PDVAAAVDAILRGEDPPCEQRFRDANGVVHREPVRRAPIDAPAFGLRRGRGGREQGQMGG
CCHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCHHCCCCCCCCHHHHCCCCCCCCCCCCC
SGPRLRDRNGSASSTLTMPPQRIFPFGVSRNRLQSAIERLRVPAVIVRDLKEATLVMTLK
CCCCCCCCCCCCCCEEECCHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
NYYRQSSQQLRQAEEQGVPVYVLRNNTITQMERQLAQVFQLRELVDDEPAPFGNDSVVEE
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
ALLETEQAITQVINGERNAVELTPRSSYIRRLQHQMADRYNLRSESRGDDPNRRVKIFR
HHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA