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The map label for this gene is pdtaR [H]

Identifier: 222525649

GI number: 222525649

Start: 3027496

End: 3028080

Strand: Direct

Name: pdtaR [H]

Synonym: Chy400_2400

Alternate gene names: 222525649

Gene position: 3027496-3028080 (Clockwise)

Preceding gene: 222525645

Following gene: 222525650

Centisome position: 57.46

GC content: 56.92

Gene sequence:

>585_bases
GTGGCCGCGATTCGCATCCTGATTGCCGAGGATAATGATCTCGTGTCGCTCACGTTGGAGGACCAACTGAAGGGGTTGGG
GTACGAGGTGGTTGGGATTGCCCGGACTGGCACCGAGGCAGTGATGCTGGCATCACGCCTGAAACCAGACCTGGTGATTA
TGGACATTCGGATGCCGGAGATGGACGGCACCGAGGCAACTGCCCGAATCCGGGATCAAACCGGTATTCCGGTGGTGATG
TTAACGGCGTTCGCCGACAAAGAGACCATCCGGCGGGCGGAGGCGGCGGGGGCGCTGGCATACCTGGTGAAGCCGGTGAA
CGAGCAGGAATTGCCACCAGCCATCACGATTGCGCTGGCCCGTCATCGTGAAATCCAGAATCTGCGGAACGAAAATCTCG
AACTGCAAGAGGCACTTGAAGCACGTAAACTGATCGAGCGGGCAAAAGGTATCTTAATGCAACGTCTCGGTCTGAGCGAA
CGCGATGCGTATGAACGTTTACGTCAGCGTGCCCGTGATAAACGCACGAAGATGAAGGATATTGCGCAGGCGATAATCGA
AGCGGAAGAGCTGCTCGGTTCATGA

Upstream 100 bases:

>100_bases
GCAAACACTTCGTCGTTCGCTTAAATTGTATCACACCATCGGGCATCTTGTGGTATGATCTTAGTCATCACTTTTGGATA
GCTTGCAGCGGGAGGCAGCC

Downstream 100 bases:

>100_bases
AGGTGCTTGACGGAACATTGCGGCTGTGGTATAGTTGCCTCGTCGAAGCGAGTAGATAGTCAAGGAAGCGATCTCATGGT
CGGTTCGCGCTTTTATACCT

Product: response regulator receiver and ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MAAIRILIAEDNDLVSLTLEDQLKGLGYEVVGIARTGTEAVMLASRLKPDLVIMDIRMPEMDGTEATARIRDQTGIPVVM
LTAFADKETIRRAEAAGALAYLVKPVNEQELPPAITIALARHREIQNLRNENLELQEALEARKLIERAKGILMQRLGLSE
RDAYERLRQRARDKRTKMKDIAQAIIEAEELLGS

Sequences:

>Translated_194_residues
MAAIRILIAEDNDLVSLTLEDQLKGLGYEVVGIARTGTEAVMLASRLKPDLVIMDIRMPEMDGTEATARIRDQTGIPVVM
LTAFADKETIRRAEAAGALAYLVKPVNEQELPPAITIALARHREIQNLRNENLELQEALEARKLIERAKGILMQRLGLSE
RDAYERLRQRARDKRTKMKDIAQAIIEAEELLGS
>Mature_193_residues
AAIRILIAEDNDLVSLTLEDQLKGLGYEVVGIARTGTEAVMLASRLKPDLVIMDIRMPEMDGTEATARIRDQTGIPVVML
TAFADKETIRRAEAAGALAYLVKPVNEQELPPAITIALARHREIQNLRNENLELQEALEARKLIERAKGILMQRLGLSER
DAYERLRQRARDKRTKMKDIAQAIIEAEELLGS

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=141, Percent_Identity=38.2978723404255, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790437, Length=123, Percent_Identity=35.7723577235772, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1788905, Length=94, Percent_Identity=42.5531914893617, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786911, Length=117, Percent_Identity=35.042735042735, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21698; Mature: 21566

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIRILIAEDNDLVSLTLEDQLKGLGYEVVGIARTGTEAVMLASRLKPDLVIMDIRMPE
CCEEEEEEECCCCEEEEEEHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCC
MDGTEATARIRDQTGIPVVMLTAFADKETIRRAEAAGALAYLVKPVNEQELPPAITIALA
CCCCHHHHHHHCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RHREIQNLRNENLELQEALEARKLIERAKGILMQRLGLSERDAYERLRQRARDKRTKMKD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IAQAIIEAEELLGS
HHHHHHHHHHHHCC
>Mature Secondary Structure 
AAIRILIAEDNDLVSLTLEDQLKGLGYEVVGIARTGTEAVMLASRLKPDLVIMDIRMPE
CEEEEEEECCCCEEEEEEHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEECCC
MDGTEATARIRDQTGIPVVMLTAFADKETIRRAEAAGALAYLVKPVNEQELPPAITIALA
CCCCHHHHHHHCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RHREIQNLRNENLELQEALEARKLIERAKGILMQRLGLSERDAYERLRQRARDKRTKMKD
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IAQAIIEAEELLGS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]