Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is icfG [H]

Identifier: 222525647

GI number: 222525647

Start: 3024647

End: 3026419

Strand: Reverse

Name: icfG [H]

Synonym: Chy400_2398

Alternate gene names: 222525647

Gene position: 3026419-3024647 (Counterclockwise)

Preceding gene: 222525648

Following gene: 222525646

Centisome position: 57.44

GC content: 57.3

Gene sequence:

>1773_bases
ATGCCGTCTTCGGAACGACAAAACCGTATCGCTGAATGGTCTGCGTTGCGATTGCTGGCCCAAACACTGAACCAAACGCT
GAACCTGCGGTCGGCGCTTGACGCAGCACTCATCCATATTCTTGAGTTGACCGGCCAGGAAGCCGGCTGGATCTATCTCC
GTGATGAAGGTGATCAGTTTATTCTGGCAGCGCGCCAGCGATTGCCACCGGCCTTGACCTATCCCGGAACGATCTGGCAG
GGTGAATGTGTATGCCAGGAAGCCTGTCGTACCGGCCAGATCCGCCAGGAACCGATACTTATGCCGTGCTCACGATTGCG
CGGTGCTGTTGGCGACAAGCGGGGTCTGACACACCATATTTCGGTTGAGTTACGTGATAGCTCTCGCCCGGTGGGTATTC
TTAATCTGGCGACGACCCAATGGGCCAAACTGGAAGCTGTTGATCAGCAGCTCATCGCAGCCATCGGTGATCTGTTAGGT
ACAGCTATTGCCCGTGCTCACCTCTACGAAGAGTTCAGCGTGCGCCGTGTGCAGGAACGGCGCGCGCTGCTTTCTCTTTC
CCAGGAGCTGCTGGTGACGGATGACCTCGAACCGACGATTCAACGGCTGGTACGGATCGGTGCACGCTTGCTGGACGCTG
ATGCCTGTGCGTTTATCGAAGCCGATGAAGCAGGTGGACGGGCACTTCTACGCGCATGCCACGGCTGGGAATTGCCCACC
GTTAGCGCATGGCCGCTGATTCTTGATGAGAACCACCCGCATCTGTGGTATCTCCCGGAACGAAGCTCACAGCTAGCCGC
AGATGCGCTGATGCGCCTGCCCATTTTGCTGCGGCGCCAGAGTTTTCAAGGTCACCTGCTGGCACCGGTCGAACTTGGTG
GTGTGCAAATTGGCTTGCTCATGGTGAATACCATCAATCCGCGCAGTTTTCTCGACAGTGAAGCCGAGCTGCTTGGGCTG
CTCGCCAGCCAACTGGCTCAGATGATTGATCGTGAGCGCCTGTATCAAGAAGCATTGGCCCGTCAGCGTCTCGAACGGGA
ACTCGATCTGGCAAGTGAAATCCAGGCCAGTTTCTTACCCGATTGTTGTCCATTTGTACCCGGCCTCCAGATTGAGGCGT
TTTACCAGGCGGCCCGTCAGGTTGGTGGCGACTTCTACGATTTTATTGAGATACCGGCTACCACACCTGATGGTCAGTCT
CGTTTTGGGGTTGTCATCGCTGATGTAACTGATAAAGGCGTGCCAGCCGCCCTCTTCATGGCCCTCTCACGCACACTCTT
GCGCGCCAGCGCCATTGATGGACGTTCGCCGGTTGCTGTCCTGGAGCGAGCCAATCGCCTGATCCTGGCCGACTCGCGCG
CAGGATTGTTCGTCACCTGCTTTTATGCGCTCATCGATCCGGCTACCGGTCGCGTTACCTACGCTAACGGCGGTCACAAC
TATCCACTCCTCTACCGTCAGGCAACCGGTCAGGTCATCCCCCTCGCCGCCCAGGGCATTGTCCTGGGGATTATCCCGGA
TCCGCACTTCGTACCGGGCGAGATTGTGCTTGACCCCGGTGATATTTTGCTGTTCTACACCGATGGTATCACCGAGGCAA
TGAACCCACAACGCGATCTCTTCGGCGATGAGCGGTTGGCGGCAGTCTTGCGCGCCTCTCATCAGCATGCACCGGGTGAC
ATCGTTGATGCTGTACTTGCCGCAGTGCGCGAATTTACCGGCGATACGCCCCAAACCGATGATATGACCATGGTCGTGAT
CAAGCGCGTGTGA

Upstream 100 bases:

>100_bases
GTTATTTTCCGGAATAACCATCAATCGCAGTTACATTCACGCCTCTTCAATGACATGTGTTTGCTAATCTGTGCGGATTC
ATAACTTCCGGTGGATTTTT

Downstream 100 bases:

>100_bases
TTACCTGCCAGTCCTGCCTGACTTGCACAGATCCGAACAGCCCATTATAATAGGCGATGACATGACGTGGCACGGGGAGA
TGACGGAGTGGTTGAACGTG

Product: GAF sensor-containing protein serine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MPSSERQNRIAEWSALRLLAQTLNQTLNLRSALDAALIHILELTGQEAGWIYLRDEGDQFILAARQRLPPALTYPGTIWQ
GECVCQEACRTGQIRQEPILMPCSRLRGAVGDKRGLTHHISVELRDSSRPVGILNLATTQWAKLEAVDQQLIAAIGDLLG
TAIARAHLYEEFSVRRVQERRALLSLSQELLVTDDLEPTIQRLVRIGARLLDADACAFIEADEAGGRALLRACHGWELPT
VSAWPLILDENHPHLWYLPERSSQLAADALMRLPILLRRQSFQGHLLAPVELGGVQIGLLMVNTINPRSFLDSEAELLGL
LASQLAQMIDRERLYQEALARQRLERELDLASEIQASFLPDCCPFVPGLQIEAFYQAARQVGGDFYDFIEIPATTPDGQS
RFGVVIADVTDKGVPAALFMALSRTLLRASAIDGRSPVAVLERANRLILADSRAGLFVTCFYALIDPATGRVTYANGGHN
YPLLYRQATGQVIPLAAQGIVLGIIPDPHFVPGEIVLDPGDILLFYTDGITEAMNPQRDLFGDERLAAVLRASHQHAPGD
IVDAVLAAVREFTGDTPQTDDMTMVVIKRV

Sequences:

>Translated_590_residues
MPSSERQNRIAEWSALRLLAQTLNQTLNLRSALDAALIHILELTGQEAGWIYLRDEGDQFILAARQRLPPALTYPGTIWQ
GECVCQEACRTGQIRQEPILMPCSRLRGAVGDKRGLTHHISVELRDSSRPVGILNLATTQWAKLEAVDQQLIAAIGDLLG
TAIARAHLYEEFSVRRVQERRALLSLSQELLVTDDLEPTIQRLVRIGARLLDADACAFIEADEAGGRALLRACHGWELPT
VSAWPLILDENHPHLWYLPERSSQLAADALMRLPILLRRQSFQGHLLAPVELGGVQIGLLMVNTINPRSFLDSEAELLGL
LASQLAQMIDRERLYQEALARQRLERELDLASEIQASFLPDCCPFVPGLQIEAFYQAARQVGGDFYDFIEIPATTPDGQS
RFGVVIADVTDKGVPAALFMALSRTLLRASAIDGRSPVAVLERANRLILADSRAGLFVTCFYALIDPATGRVTYANGGHN
YPLLYRQATGQVIPLAAQGIVLGIIPDPHFVPGEIVLDPGDILLFYTDGITEAMNPQRDLFGDERLAAVLRASHQHAPGD
IVDAVLAAVREFTGDTPQTDDMTMVVIKRV
>Mature_589_residues
PSSERQNRIAEWSALRLLAQTLNQTLNLRSALDAALIHILELTGQEAGWIYLRDEGDQFILAARQRLPPALTYPGTIWQG
ECVCQEACRTGQIRQEPILMPCSRLRGAVGDKRGLTHHISVELRDSSRPVGILNLATTQWAKLEAVDQQLIAAIGDLLGT
AIARAHLYEEFSVRRVQERRALLSLSQELLVTDDLEPTIQRLVRIGARLLDADACAFIEADEAGGRALLRACHGWELPTV
SAWPLILDENHPHLWYLPERSSQLAADALMRLPILLRRQSFQGHLLAPVELGGVQIGLLMVNTINPRSFLDSEAELLGLL
ASQLAQMIDRERLYQEALARQRLERELDLASEIQASFLPDCCPFVPGLQIEAFYQAARQVGGDFYDFIEIPATTPDGQSR
FGVVIADVTDKGVPAALFMALSRTLLRASAIDGRSPVAVLERANRLILADSRAGLFVTCFYALIDPATGRVTYANGGHNY
PLLYRQATGQVIPLAAQGIVLGIIPDPHFVPGEIVLDPGDILLFYTDGITEAMNPQRDLFGDERLAAVLRASHQHAPGDI
VDAVLAAVREFTGDTPQTDDMTMVVIKRV

Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003660
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]

EC number: NA

Molecular weight: Translated: 64990; Mature: 64858

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSERQNRIAEWSALRLLAQTLNQTLNLRSALDAALIHILELTGQEAGWIYLRDEGDQF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEE
ILAARQRLPPALTYPGTIWQGECVCQEACRTGQIRQEPILMPCSRLRGAVGDKRGLTHHI
EEEHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEE
SVELRDSSRPVGILNLATTQWAKLEAVDQQLIAAIGDLLGTAIARAHLYEEFSVRRVQER
EEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RALLSLSQELLVTDDLEPTIQRLVRIGARLLDADACAFIEADEAGGRALLRACHGWELPT
HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCC
VSAWPLILDENHPHLWYLPERSSQLAADALMRLPILLRRQSFQGHLLAPVELGGVQIGLL
CCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEE
MVNTINPRSFLDSEAELLGLLASQLAQMIDRERLYQEALARQRLERELDLASEIQASFLP
EEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DCCPFVPGLQIEAFYQAARQVGGDFYDFIEIPATTPDGQSRFGVVIADVTDKGVPAALFM
CHHCCCCCCCHHHHHHHHHHHCCCEEEHEECCCCCCCCCCCEEEEEEECCCCCCHHHHHH
ALSRTLLRASAIDGRSPVAVLERANRLILADSRAGLFVTCFYALIDPATGRVTYANGGHN
HHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCC
YPLLYRQATGQVIPLAAQGIVLGIIPDPHFVPGEIVLDPGDILLFYTDGITEAMNPQRDL
CCEEEEECCCCEEEEEECCEEEEECCCCCCCCCEEEECCCCEEEEEECCCHHHCCCHHHH
FGDERLAAVLRASHQHAPGDIVDAVLAAVREFTGDTPQTDDMTMVVIKRV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
PSSERQNRIAEWSALRLLAQTLNQTLNLRSALDAALIHILELTGQEAGWIYLRDEGDQF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEE
ILAARQRLPPALTYPGTIWQGECVCQEACRTGQIRQEPILMPCSRLRGAVGDKRGLTHHI
EEEHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEE
SVELRDSSRPVGILNLATTQWAKLEAVDQQLIAAIGDLLGTAIARAHLYEEFSVRRVQER
EEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RALLSLSQELLVTDDLEPTIQRLVRIGARLLDADACAFIEADEAGGRALLRACHGWELPT
HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCC
VSAWPLILDENHPHLWYLPERSSQLAADALMRLPILLRRQSFQGHLLAPVELGGVQIGLL
CCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEE
MVNTINPRSFLDSEAELLGLLASQLAQMIDRERLYQEALARQRLERELDLASEIQASFLP
EEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DCCPFVPGLQIEAFYQAARQVGGDFYDFIEIPATTPDGQSRFGVVIADVTDKGVPAALFM
CHHCCCCCCCHHHHHHHHHHHCCCEEEHEECCCCCCCCCCCEEEEEEECCCCCCHHHHHH
ALSRTLLRASAIDGRSPVAVLERANRLILADSRAGLFVTCFYALIDPATGRVTYANGGHN
HHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCC
YPLLYRQATGQVIPLAAQGIVLGIIPDPHFVPGEIVLDPGDILLFYTDGITEAMNPQRDL
CCEEEEECCCCEEEEEECCEEEEECCCCCCCCCEEEECCCCEEEEEECCCHHHCCCHHHH
FGDERLAAVLRASHQHAPGDIVDAVLAAVREFTGDTPQTDDMTMVVIKRV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8075401; 8905231 [H]