| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is prs [H]
Identifier: 222525616
GI number: 222525616
Start: 2988225
End: 2989163
Strand: Reverse
Name: prs [H]
Synonym: Chy400_2367
Alternate gene names: 222525616
Gene position: 2989163-2988225 (Counterclockwise)
Preceding gene: 222525618
Following gene: 222525615
Centisome position: 56.73
GC content: 56.55
Gene sequence:
>939_bases ATGGATGGTCGTTTGCTCATTTTTACCGGCAATGCCAACCCGGCATTAGCGCAAGAGATTGCCCGCAACCTGCGCATCAA TCTGGGCCGGGCACTGGTTGGTACCTTCAAAAATGGCGAGACACGGGTCAAGATTCACGACAATGTCCGTGGCTGTGATG TGTTTGTGATTCAACCCACCTGTACGCCGGTGGACCATCACCTGATGGAATTGCTCATCATGATCGATGCCTTCCGGCGA GCCTCGGCAGCGCGGGTCACGGCGGTCATTCCCTACTATGGGTATGCCAAGCAAGAGAAGAAGACCTCGGGCCGTGAGCC AATCTCGGCCAAGCTGGTAGCTAATCTGATCCGCACCGCCGGCGCTGACCGCGTTCTGACGATGGATCTGCACGCTCCAG CCATTGAAGGGTTCTTCGATATTCCGGTTGACCACCTGCAAGCCTCGCCACTGCTGGCCGATTACATTCGCGAACTGAAC CTGCCTAACCCGGTTGTCGTCTCTCCCGATACCGGGGGCGTGGGGCGGGCCAATCGCTTTCGTGAGCGGATTGGTGCCGG ACTGGCGATTATTGCCAAACAACGACCCGAACCAGATACAGCCGAAGTTATCGAAATGGTCGGTGAGGTTGAGGGGAAGA CGGCAATCATCGTCGATGATATGATCTCAACCGGGGGAACCCTGATTGAAGCAGCCCAAACGCTGCTGGCCCGTGGCGCA CGGGCTGTGTATGCCTGTGCTACCCACGGTATTTTTGCCGAAAACGCCTTACAGTTGATCGCCGAGTCCGATCTCGTCGA GACGGTAGTCACCAACACGATCCCTCAACCACCAACCGCCGCAGCAGCCCGGGTGCGCACGATTAGTGTGGCACCATTGT TTGCTGAAGCGATTATGCGTATCCACAAAGATCTATCACTGAGCGCGCTTTTTTCCTGA
Upstream 100 bases:
>100_bases CAACAACGTGGAAGAGGTCAGCACTTCTGGTCTCGCGTGTAACAGGTGCGCAGTGAGCATGCTCGCTGCGCGTTTCTATT CAGGAAAGAACTGCTGAACC
Downstream 100 bases:
>100_bases TGACGCGGTCGTTGTGCGCCCGAAGGGAGTATCAATTCGGGCGCCATTGTTGAGTGAAGCGCGCCACTCTGTTCCGCGAA AGGAGGATGATTCTCTTGGA
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MDGRLLIFTGNANPALAQEIARNLRINLGRALVGTFKNGETRVKIHDNVRGCDVFVIQPTCTPVDHHLMELLIMIDAFRR ASAARVTAVIPYYGYAKQEKKTSGREPISAKLVANLIRTAGADRVLTMDLHAPAIEGFFDIPVDHLQASPLLADYIRELN LPNPVVVSPDTGGVGRANRFRERIGAGLAIIAKQRPEPDTAEVIEMVGEVEGKTAIIVDDMISTGGTLIEAAQTLLARGA RAVYACATHGIFAENALQLIAESDLVETVVTNTIPQPPTAAAARVRTISVAPLFAEAIMRIHKDLSLSALFS
Sequences:
>Translated_312_residues MDGRLLIFTGNANPALAQEIARNLRINLGRALVGTFKNGETRVKIHDNVRGCDVFVIQPTCTPVDHHLMELLIMIDAFRR ASAARVTAVIPYYGYAKQEKKTSGREPISAKLVANLIRTAGADRVLTMDLHAPAIEGFFDIPVDHLQASPLLADYIRELN LPNPVVVSPDTGGVGRANRFRERIGAGLAIIAKQRPEPDTAEVIEMVGEVEGKTAIIVDDMISTGGTLIEAAQTLLARGA RAVYACATHGIFAENALQLIAESDLVETVVTNTIPQPPTAAAARVRTISVAPLFAEAIMRIHKDLSLSALFS >Mature_312_residues MDGRLLIFTGNANPALAQEIARNLRINLGRALVGTFKNGETRVKIHDNVRGCDVFVIQPTCTPVDHHLMELLIMIDAFRR ASAARVTAVIPYYGYAKQEKKTSGREPISAKLVANLIRTAGADRVLTMDLHAPAIEGFFDIPVDHLQASPLLADYIRELN LPNPVVVSPDTGGVGRANRFRERIGAGLAIIAKQRPEPDTAEVIEMVGEVEGKTAIIVDDMISTGGTLIEAAQTLLARGA RAVYACATHGIFAENALQLIAESDLVETVVTNTIPQPPTAAAARVRTISVAPLFAEAIMRIHKDLSLSALFS
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI28557709, Length=310, Percent_Identity=46.7741935483871, Blast_Score=274, Evalue=7e-74, Organism=Homo sapiens, GI4506129, Length=311, Percent_Identity=45.3376205787781, Blast_Score=273, Evalue=1e-73, Organism=Homo sapiens, GI4506127, Length=309, Percent_Identity=46.2783171521036, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI84875539, Length=314, Percent_Identity=44.9044585987261, Blast_Score=268, Evalue=4e-72, Organism=Homo sapiens, GI4506133, Length=347, Percent_Identity=37.463976945245, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI194018537, Length=347, Percent_Identity=37.463976945245, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI310128524, Length=145, Percent_Identity=29.6551724137931, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI310115209, Length=145, Percent_Identity=29.6551724137931, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI310118259, Length=145, Percent_Identity=29.6551724137931, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI310119946, Length=145, Percent_Identity=29.6551724137931, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1787458, Length=308, Percent_Identity=50, Blast_Score=305, Evalue=2e-84, Organism=Caenorhabditis elegans, GI17554704, Length=310, Percent_Identity=45.8064516129032, Blast_Score=270, Evalue=9e-73, Organism=Caenorhabditis elegans, GI25149168, Length=310, Percent_Identity=45.8064516129032, Blast_Score=270, Evalue=9e-73, Organism=Caenorhabditis elegans, GI17554702, Length=310, Percent_Identity=45.8064516129032, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI71989924, Length=310, Percent_Identity=45.8064516129032, Blast_Score=266, Evalue=7e-72, Organism=Caenorhabditis elegans, GI17570245, Length=338, Percent_Identity=34.0236686390533, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319403, Length=310, Percent_Identity=43.2258064516129, Blast_Score=247, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6320946, Length=309, Percent_Identity=41.747572815534, Blast_Score=241, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6321776, Length=299, Percent_Identity=40.8026755852843, Blast_Score=223, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6322667, Length=191, Percent_Identity=41.3612565445026, Blast_Score=142, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6324511, Length=94, Percent_Identity=42.5531914893617, Blast_Score=90, Evalue=5e-19, Organism=Drosophila melanogaster, GI21355239, Length=310, Percent_Identity=46.7741935483871, Blast_Score=271, Evalue=4e-73, Organism=Drosophila melanogaster, GI45551540, Length=333, Percent_Identity=43.5435435435435, Blast_Score=258, Evalue=3e-69, Organism=Drosophila melanogaster, GI24651458, Length=354, Percent_Identity=36.7231638418079, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI24651456, Length=354, Percent_Identity=36.7231638418079, Blast_Score=206, Evalue=1e-53, Organism=Drosophila melanogaster, GI281362873, Length=354, Percent_Identity=36.7231638418079, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651454, Length=354, Percent_Identity=36.7231638418079, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651462, Length=202, Percent_Identity=42.0792079207921, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI24651464, Length=202, Percent_Identity=42.0792079207921, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI45552010, Length=202, Percent_Identity=42.0792079207921, Blast_Score=149, Evalue=3e-36,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 33601; Mature: 33601
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGRLLIFTGNANPALAQEIARNLRINLGRALVGTFKNGETRVKIHDNVRGCDVFVIQPT CCCEEEEEECCCCHHHHHHHHHHHEEECCHHEEEECCCCCEEEEEECCCCCCEEEEECCC CTPVDHHLMELLIMIDAFRRASAARVTAVIPYYGYAKQEKKTSGREPISAKLVANLIRTA CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHC GADRVLTMDLHAPAIEGFFDIPVDHLQASPLLADYIRELNLPNPVVVSPDTGGVGRANRF CCCEEEEEECCCCHHCCHHCCCHHHHCCCHHHHHHHHHCCCCCCEEECCCCCCCCCHHHH RERIGAGLAIIAKQRPEPDTAEVIEMVGEVEGKTAIIVDDMISTGGTLIEAAQTLLARGA HHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCHHHHHHHHHHHCCC RAVYACATHGIFAENALQLIAESDLVETVVTNTIPQPPTAAAARVRTISVAPLFAEAIMR HHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEHHHHHHHHHH IHKDLSLSALFS HHHCCCHHHHCC >Mature Secondary Structure MDGRLLIFTGNANPALAQEIARNLRINLGRALVGTFKNGETRVKIHDNVRGCDVFVIQPT CCCEEEEEECCCCHHHHHHHHHHHEEECCHHEEEECCCCCEEEEEECCCCCCEEEEECCC CTPVDHHLMELLIMIDAFRRASAARVTAVIPYYGYAKQEKKTSGREPISAKLVANLIRTA CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHC GADRVLTMDLHAPAIEGFFDIPVDHLQASPLLADYIRELNLPNPVVVSPDTGGVGRANRF CCCEEEEEECCCCHHCCHHCCCHHHHCCCHHHHHHHHHCCCCCCEEECCCCCCCCCHHHH RERIGAGLAIIAKQRPEPDTAEVIEMVGEVEGKTAIIVDDMISTGGTLIEAAQTLLARGA HHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECHHHCCCHHHHHHHHHHHCCC RAVYACATHGIFAENALQLIAESDLVETVVTNTIPQPPTAAAARVRTISVAPLFAEAIMR HHEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEHHHHHHHHHH IHKDLSLSALFS HHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]