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The map label for this gene is nusG [H]

Identifier: 222525603

GI number: 222525603

Start: 2975083

End: 2975646

Strand: Direct

Name: nusG [H]

Synonym: Chy400_2353

Alternate gene names: 222525603

Gene position: 2975083-2975646 (Clockwise)

Preceding gene: 222525602

Following gene: 222525604

Centisome position: 56.46

GC content: 50.53

Gene sequence:

>564_bases
ATGTCTGAGGAAAAGGAAAAAGAAAAAGAGGCCGATGACCGGCGCTGGTATGTGATCCATACCTATTCGGGCTATGAAAA
CAAGGTAAAGAAAAACCTGGAACATCGCATTGCATCCATGGAGATGCAAGACCAGATTTTCCGGGTTATTGTGCCTACCG
AAGAGGAAATTGAGATCAAGAATGGGCAGCGCCGCACGGTAAATAAGAAGATCTATCCCGGCTATGTCCTGGTACAGATG
CGCCTTACCGATGATTCCTGGTATGTGGTGCGCAATACCCCTGGCGTAACCAGCTTCGTTGGGCATGGCAATAAGCCTAC
TCCCCTTGATGATGAAGAGGTCAAGGCTATTTTGCGCCAGATGGAAGGCGAAACACCGAAGGTGCGTGTGAGCTACCAGA
AGGGCCAGGCTGTCAAGATTATCGATGGCCCCTTCACCGACTTCGAGGGCATTGTCGATGCCATTGATCACGAGCGGGGT
CGAGTGCGTGTTCTGGTCTCTTTCTTTGGCCGCGAAGCGCCGGTTGAGCTTGATTTCTTGCAAGTAACACGATTGGTAGA
ATAG

Upstream 100 bases:

>100_bases
TGATTGGCTTGCTGCTCTTCATCGGTGATACGATCTTCACCTTCCTCTACACGAGCCTTGTCAGCCTCGTCCAGTAAGCT
GTTCGCGAACGGGGATTGCC

Downstream 100 bases:

>100_bases
GATATCCGTCACCTCGCTGGTTGTGCGAGGGAGGGAAAGTCGTTTATGCGCTTTCCCGTTATGCAAGGAGTTGTGTCGTG
GCTAAGAAACTCGTCGCAGT

Product: NusG antitermination factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSEEKEKEKEADDRRWYVIHTYSGYENKVKKNLEHRIASMEMQDQIFRVIVPTEEEIEIKNGQRRTVNKKIYPGYVLVQM
RLTDDSWYVVRNTPGVTSFVGHGNKPTPLDDEEVKAILRQMEGETPKVRVSYQKGQAVKIIDGPFTDFEGIVDAIDHERG
RVRVLVSFFGREAPVELDFLQVTRLVE

Sequences:

>Translated_187_residues
MSEEKEKEKEADDRRWYVIHTYSGYENKVKKNLEHRIASMEMQDQIFRVIVPTEEEIEIKNGQRRTVNKKIYPGYVLVQM
RLTDDSWYVVRNTPGVTSFVGHGNKPTPLDDEEVKAILRQMEGETPKVRVSYQKGQAVKIIDGPFTDFEGIVDAIDHERG
RVRVLVSFFGREAPVELDFLQVTRLVE
>Mature_186_residues
SEEKEKEKEADDRRWYVIHTYSGYENKVKKNLEHRIASMEMQDQIFRVIVPTEEEIEIKNGQRRTVNKKIYPGYVLVQMR
LTDDSWYVVRNTPGVTSFVGHGNKPTPLDDEEVKAILRQMEGETPKVRVSYQKGQAVKIIDGPFTDFEGIVDAIDHERGR
VRVLVSFFGREAPVELDFLQVTRLVE

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=178, Percent_Identity=44.9438202247191, Blast_Score=174, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21773; Mature: 21642

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEKEKEKEADDRRWYVIHTYSGYENKVKKNLEHRIASMEMQDQIFRVIVPTEEEIEIK
CCCHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEC
NGQRRTVNKKIYPGYVLVQMRLTDDSWYVVRNTPGVTSFVGHGNKPTPLDDEEVKAILRQ
CCCCCCCCCEECCCEEEEEEEEECCCEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHH
MEGETPKVRVSYQKGQAVKIIDGPFTDFEGIVDAIDHERGRVRVLVSFFGREAPVELDFL
HCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHCCCCCCEEHHH
QVTRLVE
HHHHHCC
>Mature Secondary Structure 
SEEKEKEKEADDRRWYVIHTYSGYENKVKKNLEHRIASMEMQDQIFRVIVPTEEEIEIK
CCHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEC
NGQRRTVNKKIYPGYVLVQMRLTDDSWYVVRNTPGVTSFVGHGNKPTPLDDEEVKAILRQ
CCCCCCCCCEECCCEEEEEEEEECCCEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHH
MEGETPKVRVSYQKGQAVKIIDGPFTDFEGIVDAIDHERGRVRVLVSFFGREAPVELDFL
HCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHCCCCCCEEHHH
QVTRLVE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]