| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525587
Identifier: 222525587
GI number: 222525587
Start: 2954018
End: 2955145
Strand: Direct
Name: 222525587
Synonym: Chy400_2337
Alternate gene names: NA
Gene position: 2954018-2955145 (Clockwise)
Preceding gene: 222525586
Following gene: 222525588
Centisome position: 56.06
GC content: 60.9
Gene sequence:
>1128_bases ATGAGTTTACGTAGTACCCGGCTGACAATGCTGATCGGCCCGACGATTCCGGTGCCTGCGCCACCGCCACTGCTGGCAGC CATAACCAGCGTTGAAGTGACCCATCGCGACGAAGGCCGGTCGGGGTTTCAGGTCGTCTTTCAGATCGGACGGGAAGCGG GTGATGTGCTCGATTATGCACTGCTCGCCGGCCCGGTGCTCCGCACCGGCAACCGCCTGGTGCTGATCGTCTGGTTCGGT GCATTGCCCCAGGTGCTGATGGACGGTCTCATCACCAATCAACAGCTCCAACCCGGCGATCAGCCCGGTTCAGCAACGCT CACCATCACCGGCGAAGATGTGAGCGTGGCGATGGATCGGGAAGAAAAGTCGGTTGAGCATCCGGCCCAACCTGAAGCGG TGATTGCCCTCAAGATTATCGCTGGTTATGCCCAGTACGGCTTGATCCCGGTGGTCATTCCGCCGCCAACGATTGATGCA CCGTTGCCGACCGAACGGATTCCGGTGCAACAGGCAACCGATCTGGCCTACCTGCGTCAGATGGCCGAACGGTTTGCCTA CGTCTTTTACGTGATGCCCGGCCCGGCACCGCTGACCAACACCGCCTACTGGGGACCGCCGGTACGGATCGGCGTTCCCC AACGGGCACTAACGGTCAATATGGGTTCGGCAACGAATGTCACCTCGATCAATTTTCAACACGACCCGCTAACTGCAACA ACGCTTACCGGCCAGGTGCAGGATCGGTCAACCGGTCAGCGCATCCCGGTGCGCTCGTTCGCCAGCCTGCGTCCACCCCT TGCCAGCATGCCGGCACTCGCCTCGTTTGCCCGCAGCACCATCTTTCGCGGCGCCGGTCTGGGTGTGGCACAGGCCATGG CCCAGGCGCAGGCTGCTACCGATGCGTCGAGCGATGTGTTGACGGTCGAAGGTGACCTTGATACCGGACGGTACGGCAGT TTGTTGCAGGCGCGCGGGCTGGTAGGTCTGCGCGGTGCCGGCTTTAGTTACGATGGCCTCTACTACGTCAAACAGGTCAA ACACCAGATCAGTCGTGAAGGGTATAAGCAGAGCTTTACGTTGACCCGCGAAGGTCTTGGTTCGACGGTACCGGTGGTGC TGCCATGA
Upstream 100 bases:
>100_bases GAATCTGTGATGCCAACGATGCTATGAATCCCTTTGATCTGACGGCTGAGATCGGGCGGCTATTGCGGGTCGCAGTGCCG ACCTTTGAAGGGTGATCGCA
Downstream 100 bases:
>100_bases ATCAGTTTTTCGGCAAATACCGTGGCAAAGTTGAAAACAATATCGATCCGCTGCAACAGGGGCGGGTGCAGGTGAGTGTC CCAGCAGTGCTTGGCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MSLRSTRLTMLIGPTIPVPAPPPLLAAITSVEVTHRDEGRSGFQVVFQIGREAGDVLDYALLAGPVLRTGNRLVLIVWFG ALPQVLMDGLITNQQLQPGDQPGSATLTITGEDVSVAMDREEKSVEHPAQPEAVIALKIIAGYAQYGLIPVVIPPPTIDA PLPTERIPVQQATDLAYLRQMAERFAYVFYVMPGPAPLTNTAYWGPPVRIGVPQRALTVNMGSATNVTSINFQHDPLTAT TLTGQVQDRSTGQRIPVRSFASLRPPLASMPALASFARSTIFRGAGLGVAQAMAQAQAATDASSDVLTVEGDLDTGRYGS LLQARGLVGLRGAGFSYDGLYYVKQVKHQISREGYKQSFTLTREGLGSTVPVVLP
Sequences:
>Translated_375_residues MSLRSTRLTMLIGPTIPVPAPPPLLAAITSVEVTHRDEGRSGFQVVFQIGREAGDVLDYALLAGPVLRTGNRLVLIVWFG ALPQVLMDGLITNQQLQPGDQPGSATLTITGEDVSVAMDREEKSVEHPAQPEAVIALKIIAGYAQYGLIPVVIPPPTIDA PLPTERIPVQQATDLAYLRQMAERFAYVFYVMPGPAPLTNTAYWGPPVRIGVPQRALTVNMGSATNVTSINFQHDPLTAT TLTGQVQDRSTGQRIPVRSFASLRPPLASMPALASFARSTIFRGAGLGVAQAMAQAQAATDASSDVLTVEGDLDTGRYGS LLQARGLVGLRGAGFSYDGLYYVKQVKHQISREGYKQSFTLTREGLGSTVPVVLP >Mature_374_residues SLRSTRLTMLIGPTIPVPAPPPLLAAITSVEVTHRDEGRSGFQVVFQIGREAGDVLDYALLAGPVLRTGNRLVLIVWFGA LPQVLMDGLITNQQLQPGDQPGSATLTITGEDVSVAMDREEKSVEHPAQPEAVIALKIIAGYAQYGLIPVVIPPPTIDAP LPTERIPVQQATDLAYLRQMAERFAYVFYVMPGPAPLTNTAYWGPPVRIGVPQRALTVNMGSATNVTSINFQHDPLTATT LTGQVQDRSTGQRIPVRSFASLRPPLASMPALASFARSTIFRGAGLGVAQAMAQAQAATDASSDVLTVEGDLDTGRYGSL LQARGLVGLRGAGFSYDGLYYVKQVKHQISREGYKQSFTLTREGLGSTVPVVLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40069; Mature: 39937
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRSTRLTMLIGPTIPVPAPPPLLAAITSVEVTHRDEGRSGFQVVFQIGREAGDVLDYA CCCCCEEEEEEECCCCCCCCCCHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LLAGPVLRTGNRLVLIVWFGALPQVLMDGLITNQQLQPGDQPGSATLTITGEDVSVAMDR HHHCHHHHCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECC EEKSVEHPAQPEAVIALKIIAGYAQYGLIPVVIPPPTIDAPLPTERIPVQQATDLAYLRQ CHHCCCCCCCCCCEEEEHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH MAERFAYVFYVMPGPAPLTNTAYWGPPVRIGVPQRALTVNMGSATNVTSINFQHDPLTAT HHHCEEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEEEECCCCCEEE TLTGQVQDRSTGQRIPVRSFASLRPPLASMPALASFARSTIFRGAGLGVAQAMAQAQAAT EEECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC DASSDVLTVEGDLDTGRYGSLLQARGLVGLRGAGFSYDGLYYVKQVKHQISREGYKQSFT CCCCCEEEEECCCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHEE LTREGLGSTVPVVLP EEHHCCCCCCCEEEC >Mature Secondary Structure SLRSTRLTMLIGPTIPVPAPPPLLAAITSVEVTHRDEGRSGFQVVFQIGREAGDVLDYA CCCCEEEEEEECCCCCCCCCCHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH LLAGPVLRTGNRLVLIVWFGALPQVLMDGLITNQQLQPGDQPGSATLTITGEDVSVAMDR HHHCHHHHCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEECC EEKSVEHPAQPEAVIALKIIAGYAQYGLIPVVIPPPTIDAPLPTERIPVQQATDLAYLRQ CHHCCCCCCCCCCEEEEHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH MAERFAYVFYVMPGPAPLTNTAYWGPPVRIGVPQRALTVNMGSATNVTSINFQHDPLTAT HHHCEEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEEEECCCCCEEE TLTGQVQDRSTGQRIPVRSFASLRPPLASMPALASFARSTIFRGAGLGVAQAMAQAQAAT EEECCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC DASSDVLTVEGDLDTGRYGSLLQARGLVGLRGAGFSYDGLYYVKQVKHQISREGYKQSFT CCCCCEEEEECCCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHEE LTREGLGSTVPVVLP EEHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA