| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525579
Identifier: 222525579
GI number: 222525579
Start: 2942872
End: 2943525
Strand: Direct
Name: 222525579
Synonym: Chy400_2328
Alternate gene names: NA
Gene position: 2942872-2943525 (Clockwise)
Preceding gene: 222525578
Following gene: 222525580
Centisome position: 55.85
GC content: 62.39
Gene sequence:
>654_bases ATGGCGCAGCCGCCGGTTGTGCGGGCGCTGTCGCTGTTGACGCCGTTTTTCCAGGATCAGCCGCTGGCCGGGCTACCTGT TGGTGCTCGCGATGCGCTGTTGTTGCTGGTGCGAGAGTGGCTCTTTGGCACCCAGATGCCCTGTGTGGTGCGGTGTCAGC AATGCGCGGCACGGCTTGAGTTTACGCTGGCGACAACCGATCTGCGCGCGCTGTCCCCCACCACAACCGTGCATCAGGTC GATCACGCAGGGGAGACGATCACCTTTCGGTTGCCGACGAGTGATGATCTGCTGGCCTTCCCGGCGGGTGCGGCAACGCC ACGGCTGATCATCGAACGCTGTCTGCTTGAGGCACCGGCAGCGTTGTCGGGTGATGCCCTGACCGCCGTAGCTACGGCGA TGGCGGAGGCCGATCCGTTGCTCGATTTCCGCATTGCGCTGACCTGTCCGGAGTGCGGTCATGCGTGGTCGGCGCCGTTT GATGTGACGGCGTTCGTCTGGCAAGAGATTGATGCCTGGGCACGCCGATTATTGCACGATGTGCATACGCTGGCCCGTGC TTACGGTTGGGGCGAACGCGACATTCTGGCTCTTAGTCCCTGGCGACGGGCTTTTTATCTGCGGTTGGTGAGCGATGAAC GATCCATTGGCTAA
Upstream 100 bases:
>100_bases ATTACGACATCGGCGAACCGGACGAACCGACCTTTACTGAGCCGCAGTAGCAATGATGACGGTTTCGGCTTCAACTGTAC TGCATATCTGGGAGACGGGT
Downstream 100 bases:
>100_bases TCTGTTGGCCCGCAGCTTTGGCAGTGAACTGAGGGATAGTGTTCAGCCACGTCTGCCATCGCGATTCGAGGTGCCTGTAG CGTCAGATCACGCCTATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAQPPVVRALSLLTPFFQDQPLAGLPVGARDALLLLVREWLFGTQMPCVVRCQQCAARLEFTLATTDLRALSPTTTVHQV DHAGETITFRLPTSDDLLAFPAGAATPRLIIERCLLEAPAALSGDALTAVATAMAEADPLLDFRIALTCPECGHAWSAPF DVTAFVWQEIDAWARRLLHDVHTLARAYGWGERDILALSPWRRAFYLRLVSDERSIG
Sequences:
>Translated_217_residues MAQPPVVRALSLLTPFFQDQPLAGLPVGARDALLLLVREWLFGTQMPCVVRCQQCAARLEFTLATTDLRALSPTTTVHQV DHAGETITFRLPTSDDLLAFPAGAATPRLIIERCLLEAPAALSGDALTAVATAMAEADPLLDFRIALTCPECGHAWSAPF DVTAFVWQEIDAWARRLLHDVHTLARAYGWGERDILALSPWRRAFYLRLVSDERSIG >Mature_216_residues AQPPVVRALSLLTPFFQDQPLAGLPVGARDALLLLVREWLFGTQMPCVVRCQQCAARLEFTLATTDLRALSPTTTVHQVD HAGETITFRLPTSDDLLAFPAGAATPRLIIERCLLEAPAALSGDALTAVATAMAEADPLLDFRIALTCPECGHAWSAPFD VTAFVWQEIDAWARRLLHDVHTLARAYGWGERDILALSPWRRAFYLRLVSDERSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23861; Mature: 23730
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPPVVRALSLLTPFFQDQPLAGLPVGARDALLLLVREWLFGTQMPCVVRCQQCAARLE CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHE FTLATTDLRALSPTTTVHQVDHAGETITFRLPTSDDLLAFPAGAATPRLIIERCLLEAPA EEEEECCHHHCCCCCHHHHHHCCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHCCC ALSGDALTAVATAMAEADPLLDFRIALTCPECGHAWSAPFDVTAFVWQEIDAWARRLLHD CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VHTLARAYGWGERDILALSPWRRAFYLRLVSDERSIG HHHHHHHHCCCCCCEEEECCHHHHEEEEEECCCCCCC >Mature Secondary Structure AQPPVVRALSLLTPFFQDQPLAGLPVGARDALLLLVREWLFGTQMPCVVRCQQCAARLE CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHE FTLATTDLRALSPTTTVHQVDHAGETITFRLPTSDDLLAFPAGAATPRLIIERCLLEAPA EEEEECCHHHCCCCCHHHHHHCCCCEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHCCC ALSGDALTAVATAMAEADPLLDFRIALTCPECGHAWSAPFDVTAFVWQEIDAWARRLLHD CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VHTLARAYGWGERDILALSPWRRAFYLRLVSDERSIG HHHHHHHHCCCCCCEEEECCHHHHEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA