| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ctaE [H]
Identifier: 222525560
GI number: 222525560
Start: 2923164
End: 2923952
Strand: Direct
Name: ctaE [H]
Synonym: Chy400_2309
Alternate gene names: 222525560
Gene position: 2923164-2923952 (Clockwise)
Preceding gene: 222525559
Following gene: 222525561
Centisome position: 55.48
GC content: 54.37
Gene sequence:
>789_bases TTGGCAACGATCACTCACGAAGAGGCACACGCCCATACGCACGGCCCGGAACTGCAACATCAGTTCGAGACGCCGGAACA GCAGAAAGAGGCTGCAACGCTAGGCATGTGGGCCTTCCTGGTCACCGAAATTATGCTCTTCGGTGGTATCTTCATGGCCT ACATTGTCTACCGATGGGCTTTTCCCGAAGCATGGGAAGAGTCGGCGGCACTGCTGAATACACCGCTGGCCACGGTAAAT ACCGTCGTGCTGCTGGTCAGCTCATTAACTGTAGCGCTGGCAGTCAATGCTGCCGAAGAGGGTAACAAGCGTCGGTTGTT GACCATGCTGGTCTTGACGATGCTGCTTGGAGTGACCTTCCTGGTCATTAAGGGTTACGAGTATAGTGAAAAGTTTGCCC ACTGTGCCGGTGCGAAAGACCCGATCAGTTGGATTACCGGCACCGATTTGCACGAGAGCCATGAGTGTCTGGTGCCAGGA CGTAGTTTCTTATTTCCTGCAGAGCACGGCACGGCGGGTGCTACGCATGGGGCGAGTGCCGGTCATGGAGCTTCCACCGG TCTGATGCAATCCGGTCATCAACTATTCTTCTTTCTCTATTTCTGTGCGACCGGCCTGCATGCCATCCACATGCTCATCG GTCTGGGAGTGATGGGGACGATCACGGTGATGGCACTCCGGGATCGGTTCTCACCAACCTACTTTACGCCGGTTGAGATT GGTGGTCTCTACTGGCACCTGATTGACATTATCTGGGTATTCCTCTTCCCACTCTTCTATCTGGTTTAG
Upstream 100 bases:
>100_bases GACCGGGTTCACCACTATAAGGCTGGTGGTACTGATAGCAGAACACCAGGTACAAGATTGTCGGTAGTGGCGTTGATAGG TAAAGGCAGAGGAGAGAGCG
Downstream 100 bases:
>100_bases GAGGGCGCGATGGCCGAGCGACACGAACATCAACATGCTCACCACCACGGCGCCGGGCATGCCCATATCTCGCGGGGGAC CTATTATCGGGTCTTCGGAG
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MATITHEEAHAHTHGPELQHQFETPEQQKEAATLGMWAFLVTEIMLFGGIFMAYIVYRWAFPEAWEESAALLNTPLATVN TVVLLVSSLTVALAVNAAEEGNKRRLLTMLVLTMLLGVTFLVIKGYEYSEKFAHCAGAKDPISWITGTDLHESHECLVPG RSFLFPAEHGTAGATHGASAGHGASTGLMQSGHQLFFFLYFCATGLHAIHMLIGLGVMGTITVMALRDRFSPTYFTPVEI GGLYWHLIDIIWVFLFPLFYLV
Sequences:
>Translated_262_residues MATITHEEAHAHTHGPELQHQFETPEQQKEAATLGMWAFLVTEIMLFGGIFMAYIVYRWAFPEAWEESAALLNTPLATVN TVVLLVSSLTVALAVNAAEEGNKRRLLTMLVLTMLLGVTFLVIKGYEYSEKFAHCAGAKDPISWITGTDLHESHECLVPG RSFLFPAEHGTAGATHGASAGHGASTGLMQSGHQLFFFLYFCATGLHAIHMLIGLGVMGTITVMALRDRFSPTYFTPVEI GGLYWHLIDIIWVFLFPLFYLV >Mature_261_residues ATITHEEAHAHTHGPELQHQFETPEQQKEAATLGMWAFLVTEIMLFGGIFMAYIVYRWAFPEAWEESAALLNTPLATVNT VVLLVSSLTVALAVNAAEEGNKRRLLTMLVLTMLLGVTFLVIKGYEYSEKFAHCAGAKDPISWITGTDLHESHECLVPGR SFLFPAEHGTAGATHGASAGHGASTGLMQSGHQLFFFLYFCATGLHAIHMLIGLGVMGTITVMALRDRFSPTYFTPVEIG GLYWHLIDIIWVFLFPLFYLV
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 28917; Mature: 28786
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATITHEEAHAHTHGPELQHQFETPEQQKEAATLGMWAFLVTEIMLFGGIFMAYIVYRWA CCCCCCCHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FPEAWEESAALLNTPLATVNTVVLLVSSLTVALAVNAAEEGNKRRLLTMLVLTMLLGVTF CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHH LVIKGYEYSEKFAHCAGAKDPISWITGTDLHESHECLVPGRSFLFPAEHGTAGATHGASA HHHCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCEECCCCCEECCCCCCCCCCCCCCCC GHGASTGLMQSGHQLFFFLYFCATGLHAIHMLIGLGVMGTITVMALRDRFSPTYFTPVEI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHH GGLYWHLIDIIWVFLFPLFYLV HHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure ATITHEEAHAHTHGPELQHQFETPEQQKEAATLGMWAFLVTEIMLFGGIFMAYIVYRWA CCCCCCHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FPEAWEESAALLNTPLATVNTVVLLVSSLTVALAVNAAEEGNKRRLLTMLVLTMLLGVTF CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHH LVIKGYEYSEKFAHCAGAKDPISWITGTDLHESHECLVPGRSFLFPAEHGTAGATHGASA HHHCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCEECCCCCEECCCCCCCCCCCCCCCC GHGASTGLMQSGHQLFFFLYFCATGLHAIHMLIGLGVMGTITVMALRDRFSPTYFTPVEI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHH GGLYWHLIDIIWVFLFPLFYLV HHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14602910 [H]