Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525514

Identifier: 222525514

GI number: 222525514

Start: 2866595

End: 2867437

Strand: Direct

Name: 222525514

Synonym: Chy400_2262

Alternate gene names: NA

Gene position: 2866595-2867437 (Clockwise)

Preceding gene: 222525513

Following gene: 222525522

Centisome position: 54.41

GC content: 64.89

Gene sequence:

>843_bases
ATGGACTTTTCGGTTCTGCTCGTATATCATGACGCTATGACACGAAAAGCGTATCCCAGTGATGTTTCCGATGAGGAGTG
GGCGTTTGTCGCGCCCTATTTGACGCTGATGGACGAAGCAGCACCGCAGCGGAAATACCCCCTGCGCGACGTCTCCAATG
CGCTGCGTTACCTTCTGCGTACCGGTGCGCCGTGGCGGATGCTGCCCACTGACGTGCCGCCGTGGCCCGTGGTGTATCAG
CAGACCCAGCGCTGGCTGAAGGCGGGCGTGGTTGCGCAGATGGTGCATGACGTGCGGATGCTGCTGCGTGACATCACTGA
CCGCACGCCCCAGCCTCGCGCTGTCATTGTGGACAGCCGGACGCTCCAGTCGACACCGGAACGCGGGGGACGTGCCGGGT
ACGATGGACACAAGCGGCGGAACGGCGCGACGGTGCATCTGGCGGTGGCTACCCTGGGGCACCTGCTGGCGGTTGTGGTC
ACGCCAGCCAACGAGCAAGACCGGGCGCAGGTGGCGGCGCTGGCGCAGCGCATGCAGGAGATACCTGGCGACACGGTGGA
GGTGGCCGTCGTTGACCAGGGCTACACCGGTGAGCAACCGGCAGCCGATGCCGCCGCCCACGGCAGTCGCCTGGCGGTGG
TCACGCTGCCGACCGCCAAGCGAGGCGTTGTCTTGCTGCCGCGGCGCTGGGTGGTCGAGCGCAGGTTTGCCTGGATGACG
CGCTTCCGTCGCTTGGTACGTGACGACGAACGTGTGGCGGAGACGCTGGCCGGCTTGCATGTCGTCGCCTTCGCCATCTT
GTTGGCCCATCGGTTTGTCGCTCTCATGGTTCAACGTTCATAA

Upstream 100 bases:

>100_bases
GCTTGTTGTAATGCCTTTATCAGCAACGGCAAGTCTTAGACAACCGTGTTCCAGAGGATGTCCAGATTGATGTCAAAGCA
GGCATGCACTAGAGCCTGTT

Downstream 100 bases:

>100_bases
CAGGCTCTAGCCGGTGCCGCATGCCCATGATGTCTTCCCATGGGATATCCGGCATCTGCTCCCGCGTGGCTGCGGACACT
TGATAAGCAGCTTCACCGAT

Product: transposase IS5 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase-Like Protein; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase Of; Transposase Protein; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Is4 Transposase Protein; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposon; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Fragment; Transposase And Inactivated Derivatives-Like

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRKYPLRDVSNALRYLLRTGAPWRMLPTDVPPWPVVYQ
QTQRWLKAGVVAQMVHDVRMLLRDITDRTPQPRAVIVDSRTLQSTPERGGRAGYDGHKRRNGATVHLAVATLGHLLAVVV
TPANEQDRAQVAALAQRMQEIPGDTVEVAVVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGVVLLPRRWVVERRFAWMT
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVALMVQRS

Sequences:

>Translated_280_residues
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRKYPLRDVSNALRYLLRTGAPWRMLPTDVPPWPVVYQ
QTQRWLKAGVVAQMVHDVRMLLRDITDRTPQPRAVIVDSRTLQSTPERGGRAGYDGHKRRNGATVHLAVATLGHLLAVVV
TPANEQDRAQVAALAQRMQEIPGDTVEVAVVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGVVLLPRRWVVERRFAWMT
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVALMVQRS
>Mature_280_residues
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRKYPLRDVSNALRYLLRTGAPWRMLPTDVPPWPVVYQ
QTQRWLKAGVVAQMVHDVRMLLRDITDRTPQPRAVIVDSRTLQSTPERGGRAGYDGHKRRNGATVHLAVATLGHLLAVVV
TPANEQDRAQVAALAQRMQEIPGDTVEVAVVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGVVLLPRRWVVERRFAWMT
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVALMVQRS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31428; Mature: 31428

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRKYPLRDVSNALRYLLR
CCEEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TGAPWRMLPTDVPPWPVVYQQTQRWLKAGVVAQMVHDVRMLLRDITDRTPQPRAVIVDSR
CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
TLQSTPERGGRAGYDGHKRRNGATVHLAVATLGHLLAVVVTPANEQDRAQVAALAQRMQE
HHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH
IPGDTVEVAVVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGVVLLPRRWVVERRFAWMT
CCCCEEEEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEEECHHHHHHHHHHHHH
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVALMVQRS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFSVLLVYHDAMTRKAYPSDVSDEEWAFVAPYLTLMDEAAPQRKYPLRDVSNALRYLLR
CCEEEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TGAPWRMLPTDVPPWPVVYQQTQRWLKAGVVAQMVHDVRMLLRDITDRTPQPRAVIVDSR
CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
TLQSTPERGGRAGYDGHKRRNGATVHLAVATLGHLLAVVVTPANEQDRAQVAALAQRMQE
HHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH
IPGDTVEVAVVDQGYTGEQPAADAAAHGSRLAVVTLPTAKRGVVLLPRRWVVERRFAWMT
CCCCEEEEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCCCCEEEECHHHHHHHHHHHHH
RFRRLVRDDERVAETLAGLHVVAFAILLAHRFVALMVQRS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA