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The map label for this gene is puf2C

Identifier: 222525504

GI number: 222525504

Start: 2852224

End: 2853468

Strand: Reverse

Name: puf2C

Synonym: Chy400_2252

Alternate gene names: 222525504

Gene position: 2853468-2852224 (Counterclockwise)

Preceding gene: 222525505

Following gene: 222525503

Centisome position: 54.16

GC content: 52.61

Gene sequence:

>1245_bases
ATGCAATCGTCACGACCAAGTGATCGGCAATTGGCGATCGTTGTTTCGGTGGCGGTGGGAATCGTTGTCGCGGTCATTAC
GACGGCCACCTTCTGGTGGGTATACGATTTGACGTTAGGCCGTGCGCAACGGGAGGCCGCACAAACAGCCGGTGCACGCT
GGAGTCCAAGTGACGGGATTAAAGTTATCACCAGCTCACCTCCGGTCACTCCCACCGATGGCCGCCAGAACTGGATGGGT
ACGCAGGCATGGAACGAAGGAGTACAGGCTGGTCAGGCCTGGATCCAACAGTATCCAAATACGGTAAATGTCCAGGTGCT
GATTGGGATGAGTTCAGCCCAAATCTGGACGTACATGCAGCAGTATGTTTCGGGTGCCCTTGGCGTTGGTTGTCAATATT
GTCACAACATCAACAACTTTGCCAGTGATGAATATCCGCAGAAGATTGCCGCCCGGAACATGTTGCGTCTGGTGCGTGAC
GTAAATGCAGAGTTCATTGTCAACCTCCCCAACTGGCAGGGGAATTATGTCCAGTGCGCAACCTGTCATAACAATGCACC
TAATAATCTTGAGGGATTCGGTGCTCAATTTATCAATTCGGTGCCACCGATTAAGGTAACGGTTGATCCGCTCGATGCCA
ATGGAATGGCGATCCTTGACCCGGCGCAGAAGCCCGAAGCGATTCGCGAGCCGGTGCTGCTCAAAGATGCCATCCTCTTC
TATATTTACAATTATCAGGTCTGGAAGCCATTCGATCCCAATGATCCCGAAAGTGGGCGTGGTTCACTTGCCCTGACCTA
TGATGGCGGTCGCACGCAGGATCAGGTGACCATTAACCAGAACGTGATGAATTATCAAGCCTGGTCGCTTGGGGTTGGCT
GTACGTTCTGTCACAACTCGCGTAACTTTGTGGCCTATGAGCTGAATCCGGCTGGCGATAATGTCCTTAATCCGCTGTAC
GCCTACAATAAGTTGAAGGCACAACGTATGTTACTGCTGACAACCTGGCTGGCCGAGAACTGGCCGCGCTACGGCGCGAT
TGCTAAACCGGAAATTCCTACCGGTAGTGGTGCAGCCAGCCGCTATTCGTACCAGCGTCTGGGTGATGGTCAGATTTACA
ATGTGCCCGGCTGTTACACCTGCCACCAGGGGAATAATATCCCACTGGCGTCAATCAATCAGGCCAATATTCCATCTGGT
GATGCAGGGATTGTGGTCTTACCACCTCAAATTCGCGGACGGTAA

Upstream 100 bases:

>100_bases
ACCGATACATAGTCAGGGGCGGCGTCGCCCTTCCGCCGCAATCTCGCGCTTGCATCGGCGCCGATAATATCGGTTCGCCG
ATCTGGATCAGGAGAGGCCC

Downstream 100 bases:

>100_bases
ACGATCGTGTTGAAGGGGGCGTGAATGCGCCCCCGCGCCATCAATGCGCTAGAGAGCATTTCCCATGAGCGACATGAGCG
ATCAAACCAGGCTATCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome c554

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MQSSRPSDRQLAIVVSVAVGIVVAVITTATFWWVYDLTLGRAQREAAQTAGARWSPSDGIKVITSSPPVTPTDGRQNWMG
TQAWNEGVQAGQAWIQQYPNTVNVQVLIGMSSAQIWTYMQQYVSGALGVGCQYCHNINNFASDEYPQKIAARNMLRLVRD
VNAEFIVNLPNWQGNYVQCATCHNNAPNNLEGFGAQFINSVPPIKVTVDPLDANGMAILDPAQKPEAIREPVLLKDAILF
YIYNYQVWKPFDPNDPESGRGSLALTYDGGRTQDQVTINQNVMNYQAWSLGVGCTFCHNSRNFVAYELNPAGDNVLNPLY
AYNKLKAQRMLLLTTWLAENWPRYGAIAKPEIPTGSGAASRYSYQRLGDGQIYNVPGCYTCHQGNNIPLASINQANIPSG
DAGIVVLPPQIRGR

Sequences:

>Translated_414_residues
MQSSRPSDRQLAIVVSVAVGIVVAVITTATFWWVYDLTLGRAQREAAQTAGARWSPSDGIKVITSSPPVTPTDGRQNWMG
TQAWNEGVQAGQAWIQQYPNTVNVQVLIGMSSAQIWTYMQQYVSGALGVGCQYCHNINNFASDEYPQKIAARNMLRLVRD
VNAEFIVNLPNWQGNYVQCATCHNNAPNNLEGFGAQFINSVPPIKVTVDPLDANGMAILDPAQKPEAIREPVLLKDAILF
YIYNYQVWKPFDPNDPESGRGSLALTYDGGRTQDQVTINQNVMNYQAWSLGVGCTFCHNSRNFVAYELNPAGDNVLNPLY
AYNKLKAQRMLLLTTWLAENWPRYGAIAKPEIPTGSGAASRYSYQRLGDGQIYNVPGCYTCHQGNNIPLASINQANIPSG
DAGIVVLPPQIRGR
>Mature_414_residues
MQSSRPSDRQLAIVVSVAVGIVVAVITTATFWWVYDLTLGRAQREAAQTAGARWSPSDGIKVITSSPPVTPTDGRQNWMG
TQAWNEGVQAGQAWIQQYPNTVNVQVLIGMSSAQIWTYMQQYVSGALGVGCQYCHNINNFASDEYPQKIAARNMLRLVRD
VNAEFIVNLPNWQGNYVQCATCHNNAPNNLEGFGAQFINSVPPIKVTVDPLDANGMAILDPAQKPEAIREPVLLKDAILF
YIYNYQVWKPFDPNDPESGRGSLALTYDGGRTQDQVTINQNVMNYQAWSLGVGCTFCHNSRNFVAYELNPAGDNVLNPLY
AYNKLKAQRMLLLTTWLAENWPRYGAIAKPEIPTGSGAASRYSYQRLGDGQIYNVPGCYTCHQGNNIPLASINQANIPSG
DAGIVVLPPQIRGR

Specific function: Serves as the immediate electron donor to the oxidized BChl2 (bacteriochlorophyll dimer) that is oxidized in the first step of light-induced charge separation. Can also oxidize low- potential substrates

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): C554_CHLAA (P33325)

Other databases:

- EMBL:   M77813
- EMBL:   CP000909
- EMBL:   X73899
- PIR:   A39303
- RefSeq:   YP_001635690.1
- ProteinModelPortal:   P33325
- SMR:   P33325
- GeneID:   5826544
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_2089
- HOGENOM:   HBG403601
- OMA:   RITESQP
- ProtClustDB:   CLSK974653
- GO:   GO:0006810
- InterPro:   IPR011031
- InterPro:   IPR023119
- InterPro:   IPR003158
- Gene3D:   G3DSA:1.10.468.10

Pfam domain/function: PF02276 CytoC_RC

EC number: NA

Molecular weight: Translated: 45594; Mature: 45594

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: BINDING 131-131 BINDING 134-134 BINDING 179-179 BINDING 182-182 BINDING 294-294 BINDING 297-297 BINDING 378-378 BINDING 381-381

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSRPSDRQLAIVVSVAVGIVVAVITTATFWWVYDLTLGRAQREAAQTAGARWSPSDGI
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCCCCCE
KVITSSPPVTPTDGRQNWMGTQAWNEGVQAGQAWIQQYPNTVNVQVLIGMSSAQIWTYMQ
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHH
QYVSGALGVGCQYCHNINNFASDEYPQKIAARNMLRLVRDVNAEFIVNLPNWQGNYVQCA
HHHHHHHHCCHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEE
TCHNNAPNNLEGFGAQFINSVPPIKVTVDPLDANGMAILDPAQKPEAIREPVLLKDAILF
EECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCHHHHCCHHHHHEEEE
YIYNYQVWKPFDPNDPESGRGSLALTYDGGRTQDQVTINQNVMNYQAWSLGVGCTFCHNS
EEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCEEEEEEEEECCEEEEEECC
RNFVAYELNPAGDNVLNPLYAYNKLKAQRMLLLTTWLAENWPRYGAIAKPEIPTGSGAAS
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
RYSYQRLGDGQIYNVPGCYTCHQGNNIPLASINQANIPSGDAGIVVLPPQIRGR
HCHHHHCCCCEEEECCCEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MQSSRPSDRQLAIVVSVAVGIVVAVITTATFWWVYDLTLGRAQREAAQTAGARWSPSDGI
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCCCCCCE
KVITSSPPVTPTDGRQNWMGTQAWNEGVQAGQAWIQQYPNTVNVQVLIGMSSAQIWTYMQ
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHH
QYVSGALGVGCQYCHNINNFASDEYPQKIAARNMLRLVRDVNAEFIVNLPNWQGNYVQCA
HHHHHHHHCCHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEE
TCHNNAPNNLEGFGAQFINSVPPIKVTVDPLDANGMAILDPAQKPEAIREPVLLKDAILF
EECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCHHHHCCHHHHHEEEE
YIYNYQVWKPFDPNDPESGRGSLALTYDGGRTQDQVTINQNVMNYQAWSLGVGCTFCHNS
EEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCEEEEEEEEECCEEEEEECC
RNFVAYELNPAGDNVLNPLYAYNKLKAQRMLLLTTWLAENWPRYGAIAKPEIPTGSGAAS
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
RYSYQRLGDGQIYNVPGCYTCHQGNNIPLASINQANIPSGDAGIVVLPPQIRGR
HCHHHHCCCCEEEECCCEEEECCCCCCCEEECCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1660302; 7535995