Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525492

Identifier: 222525492

GI number: 222525492

Start: 2831362

End: 2833569

Strand: Reverse

Name: 222525492

Synonym: Chy400_2240

Alternate gene names: NA

Gene position: 2833569-2831362 (Counterclockwise)

Preceding gene: 222525493

Following gene: 222525491

Centisome position: 53.78

GC content: 49.0

Gene sequence:

>2208_bases
GTGAAAGGTAGTTTTGCCGACATTCCCATCTCGCCAGGAGTATCCGATCCCTCTTCGGATAATCGCAATGGCTCTTTTGT
TATCAAATTAAGTAGCGATCTCGCCTCGCTACTCGCGAGCACTTTTTTCAACGACAGATATAGCAGTATTCATGGAATTG
CTATCGACACCCAGGGCAACGTCTACGTGGCTGGAGAGACCGCTTCTACCGATTTCCCAACTACACCAGAAGCGTATGAC
CGGTCGTATAATGGCAGTCATTATGATGGCTTTGTGAGTAAGCTGAGTAATGACTTAACCACTATTCTTGCCAGTACATT
CCTCGGAGGAAATGATACAGATGAAATAAAAGCCCTCACCCTCGATACCAGGAACAACGTCTACGTGGTTGGCACAACGA
GTTCGCTCGACTTTCCAACTAGTAGTGGAGCATTTGCGAGATCGTACCATGGTGGTATGACGGATGCCTTTGTAAGCCGG
CTAAATGGTGATCTGACCACGCTGCTCGCCAGCACCTTCCTCGGCGGTTCTCGCGAATCTAACGGTAACGATAGAGCCAA
TTCGATAGTTATTAGCAACCAGAATTCCATTTACGTCGCAGGCAGCACAACGTCTATCAATTTTCCGACCACATCGGGAA
CATTTGACACTTCATACCATGAAGGTCCTGAACCCGATGTTAAAGACGCCTTTGTGAGCAAGCTGAGCGATGACCTCACC
ACATTATTCGCCAGCACCGTCCTCGGTGGTTATAATGACGATCAGATTAACACCCTTGCCCTTGATCCCCATGGCAATGT
CTATGTAGCAGGTTGGACCGGGTCGTCCGACTTCCCAACCACACCTGGAACGTATGATACGTCAATTGATGGTTACGCCG
ATGCTTTCATAAGCAAACTCAATAGTGACCTCTCCTCTCTCATGTTCAGCACGTTTCTCGGCGGTAGAGGGTGGGAAAGT
ATTACCGCCTTCGCCTTTGATATCCAGGGCAACATTTATGTAGCAGGGGCAACATCCTCGGCTGACTTTCCAACTACTCC
AGATGCCTATAACCCCTCGTTCAATCATTCCTACAATGCCTTTGTGAGTAAGCTAAACAGTAACCTCTCCATTCTACAGG
CCAGCACGTTCCTTGGTGGCAGTGCTGGCGACATTATTGCTGATCTCACATTGGATGGTAATGGTGACGTATATGTCGTA
GGCGCAACCAACTCTAGTGACTTCCCAACTACTTCTGGAGCGTATGATCCATCATTCAATGGCTCTAATGATTTTTATGA
TGATGCCTTTGTCAGCAAGTTAGACGGTACGCTTGCTCATCTCATTGCGAGTACATTTCTCGGAGGTCTCTATATAGACT
ATGCAGTAGCAGTCACTACTGATTCTCAGAGAAATGTCTACGTAGTGGGGGTAACCTGGTCTAATGACTTCCCAGCTACA
TCAGGAGTGTATAACAGCTCATTCAACGGGTATGAAGACGGTTTTGTGAGCAAATTAAGCAACGACCTGTCTACTCTACT
CGCCAGCACCTTCTTTGGAGGCAGTCATAGGGATCTACCCGGGGACATCGCTTGGACACGACAGGGCACCCTTGTCGTAG
CAGGAAGTACCGCTTCGGCAAATTTTCCCACCACACCAAATGCGAGCGATCCATCACTCAGTGGTTTTTTCAACGCTTTC
GTCAGCAATTTCAGCAGCGATCTGGCGACCCTGCGTTTCAGTACCTTCCTCGGCGGGAGTCAATGGGACGAAGCCACCGC
TATTGCCATCGATCACCGGGACACCATATATGTAGTCGGATCTACACAATCTACTGACTTCCCAATGACTACTGGCGCAT
ACGCCACAACCCTCCGAGGCAGTGAAGACACCTTTATTAGCAAGTTGACATACACCTTTACCAAAACCAGTCCTGACCAT
AACGCCATCCATCCACCGTCCAGCATCACCTTGCAGTGGCAATCTATCGACAACACTGTTCACCACTACCGTTACTGTCT
TGCCACTACTCCTGACTGCACACCCACAATCAACGTCGGTAATCGTACCAGTGTGACCATAACCAACGTCAGTCCTGATA
CGACCTACTACTGGCAGGTGCGCGCCTGTGCTGATAGCGACTGTACAACGTTTATGGATGCTGACAACGGGCAGCATTTC
TCGTTCACGGTACGCTTCGCTATCTACCTGCCGCTCACGATCAGGTAG

Upstream 100 bases:

>100_bases
ATGATCTATCAACACTCATTGAGAGTACTTTTTAGGTGGAGATGATAACGATCAGGCGACCACCATCGCCATCGATGATC
GGGGGAACGTCTACGTCGCA

Downstream 100 bases:

>100_bases
GCAGGCAGGGTATGGCAATGGGTCCTTGCTACCACAGCACCACCGGCATGGTGACAACCTCTATTGGTCGCCTGCGCAGT
ACATCCTTAGGAAAACCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGNVYVAGETASTDFPTTPEAYD
RSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALTLDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSR
LNGDLTTLLASTFLGGSRESNGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT
TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKLNSDLSSLMFSTFLGGRGWES
ITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNAFVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVV
GATNSSDFPTTSGAYDPSFNGSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT
SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASANFPTTPNASDPSLSGFFNAF
VSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVGSTQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDH
NAIHPPSSITLQWQSIDNTVHHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF
SFTVRFAIYLPLTIR

Sequences:

>Translated_735_residues
MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGNVYVAGETASTDFPTTPEAYD
RSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALTLDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSR
LNGDLTTLLASTFLGGSRESNGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT
TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKLNSDLSSLMFSTFLGGRGWES
ITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNAFVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVV
GATNSSDFPTTSGAYDPSFNGSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT
SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASANFPTTPNASDPSLSGFFNAF
VSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVGSTQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDH
NAIHPPSSITLQWQSIDNTVHHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF
SFTVRFAIYLPLTIR
>Mature_735_residues
MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGNVYVAGETASTDFPTTPEAYD
RSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALTLDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSR
LNGDLTTLLASTFLGGSRESNGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT
TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKLNSDLSSLMFSTFLGGRGWES
ITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNAFVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVV
GATNSSDFPTTSGAYDPSFNGSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT
SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASANFPTTPNASDPSLSGFFNAF
VSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVGSTQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDH
NAIHPPSSITLQWQSIDNTVHHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF
SFTVRFAIYLPLTIR

Specific function: Unknown

COG id: COG3291

COG function: function code R; FOG: PKD repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78498; Mature: 78498

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGN
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEEECCCC
VYVAGETASTDFPTTPEAYDRSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALT
EEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
LDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSRLNGDLTTLLASTFLGGSRES
EECCCCEEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCC
NGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT
CCCCCCCEEEEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKL
HHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
NSDLSSLMFSTFLGGRGWESITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNA
HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
FVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVVGATNSSDFPTTSGAYDPSFN
HHHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
GSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEEEEECCCCCCC
SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCC
NFPTTPNASDPSLSGFFNAFVSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCEEEEEEECCCEEEEEE
STQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDHNAIHPPSSITLQWQSIDNTV
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCHH
HHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF
HHEEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCCEE
SFTVRFAIYLPLTIR
EEEEEEEEEEEEEEC
>Mature Secondary Structure
MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGN
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEEECCCC
VYVAGETASTDFPTTPEAYDRSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALT
EEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
LDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSRLNGDLTTLLASTFLGGSRES
EECCCCEEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCC
NGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT
CCCCCCCEEEEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKL
HHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
NSDLSSLMFSTFLGGRGWESITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNA
HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
FVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVVGATNSSDFPTTSGAYDPSFN
HHHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
GSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEEEEECCCCCCC
SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCC
NFPTTPNASDPSLSGFFNAFVSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCEEEEEEECCCEEEEEE
STQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDHNAIHPPSSITLQWQSIDNTV
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCHH
HHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF
HHEEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCCEE
SFTVRFAIYLPLTIR
EEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA