| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525492
Identifier: 222525492
GI number: 222525492
Start: 2831362
End: 2833569
Strand: Reverse
Name: 222525492
Synonym: Chy400_2240
Alternate gene names: NA
Gene position: 2833569-2831362 (Counterclockwise)
Preceding gene: 222525493
Following gene: 222525491
Centisome position: 53.78
GC content: 49.0
Gene sequence:
>2208_bases GTGAAAGGTAGTTTTGCCGACATTCCCATCTCGCCAGGAGTATCCGATCCCTCTTCGGATAATCGCAATGGCTCTTTTGT TATCAAATTAAGTAGCGATCTCGCCTCGCTACTCGCGAGCACTTTTTTCAACGACAGATATAGCAGTATTCATGGAATTG CTATCGACACCCAGGGCAACGTCTACGTGGCTGGAGAGACCGCTTCTACCGATTTCCCAACTACACCAGAAGCGTATGAC CGGTCGTATAATGGCAGTCATTATGATGGCTTTGTGAGTAAGCTGAGTAATGACTTAACCACTATTCTTGCCAGTACATT CCTCGGAGGAAATGATACAGATGAAATAAAAGCCCTCACCCTCGATACCAGGAACAACGTCTACGTGGTTGGCACAACGA GTTCGCTCGACTTTCCAACTAGTAGTGGAGCATTTGCGAGATCGTACCATGGTGGTATGACGGATGCCTTTGTAAGCCGG CTAAATGGTGATCTGACCACGCTGCTCGCCAGCACCTTCCTCGGCGGTTCTCGCGAATCTAACGGTAACGATAGAGCCAA TTCGATAGTTATTAGCAACCAGAATTCCATTTACGTCGCAGGCAGCACAACGTCTATCAATTTTCCGACCACATCGGGAA CATTTGACACTTCATACCATGAAGGTCCTGAACCCGATGTTAAAGACGCCTTTGTGAGCAAGCTGAGCGATGACCTCACC ACATTATTCGCCAGCACCGTCCTCGGTGGTTATAATGACGATCAGATTAACACCCTTGCCCTTGATCCCCATGGCAATGT CTATGTAGCAGGTTGGACCGGGTCGTCCGACTTCCCAACCACACCTGGAACGTATGATACGTCAATTGATGGTTACGCCG ATGCTTTCATAAGCAAACTCAATAGTGACCTCTCCTCTCTCATGTTCAGCACGTTTCTCGGCGGTAGAGGGTGGGAAAGT ATTACCGCCTTCGCCTTTGATATCCAGGGCAACATTTATGTAGCAGGGGCAACATCCTCGGCTGACTTTCCAACTACTCC AGATGCCTATAACCCCTCGTTCAATCATTCCTACAATGCCTTTGTGAGTAAGCTAAACAGTAACCTCTCCATTCTACAGG CCAGCACGTTCCTTGGTGGCAGTGCTGGCGACATTATTGCTGATCTCACATTGGATGGTAATGGTGACGTATATGTCGTA GGCGCAACCAACTCTAGTGACTTCCCAACTACTTCTGGAGCGTATGATCCATCATTCAATGGCTCTAATGATTTTTATGA TGATGCCTTTGTCAGCAAGTTAGACGGTACGCTTGCTCATCTCATTGCGAGTACATTTCTCGGAGGTCTCTATATAGACT ATGCAGTAGCAGTCACTACTGATTCTCAGAGAAATGTCTACGTAGTGGGGGTAACCTGGTCTAATGACTTCCCAGCTACA TCAGGAGTGTATAACAGCTCATTCAACGGGTATGAAGACGGTTTTGTGAGCAAATTAAGCAACGACCTGTCTACTCTACT CGCCAGCACCTTCTTTGGAGGCAGTCATAGGGATCTACCCGGGGACATCGCTTGGACACGACAGGGCACCCTTGTCGTAG CAGGAAGTACCGCTTCGGCAAATTTTCCCACCACACCAAATGCGAGCGATCCATCACTCAGTGGTTTTTTCAACGCTTTC GTCAGCAATTTCAGCAGCGATCTGGCGACCCTGCGTTTCAGTACCTTCCTCGGCGGGAGTCAATGGGACGAAGCCACCGC TATTGCCATCGATCACCGGGACACCATATATGTAGTCGGATCTACACAATCTACTGACTTCCCAATGACTACTGGCGCAT ACGCCACAACCCTCCGAGGCAGTGAAGACACCTTTATTAGCAAGTTGACATACACCTTTACCAAAACCAGTCCTGACCAT AACGCCATCCATCCACCGTCCAGCATCACCTTGCAGTGGCAATCTATCGACAACACTGTTCACCACTACCGTTACTGTCT TGCCACTACTCCTGACTGCACACCCACAATCAACGTCGGTAATCGTACCAGTGTGACCATAACCAACGTCAGTCCTGATA CGACCTACTACTGGCAGGTGCGCGCCTGTGCTGATAGCGACTGTACAACGTTTATGGATGCTGACAACGGGCAGCATTTC TCGTTCACGGTACGCTTCGCTATCTACCTGCCGCTCACGATCAGGTAG
Upstream 100 bases:
>100_bases ATGATCTATCAACACTCATTGAGAGTACTTTTTAGGTGGAGATGATAACGATCAGGCGACCACCATCGCCATCGATGATC GGGGGAACGTCTACGTCGCA
Downstream 100 bases:
>100_bases GCAGGCAGGGTATGGCAATGGGTCCTTGCTACCACAGCACCACCGGCATGGTGACAACCTCTATTGGTCGCCTGCGCAGT ACATCCTTAGGAAAACCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGNVYVAGETASTDFPTTPEAYD RSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALTLDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSR LNGDLTTLLASTFLGGSRESNGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKLNSDLSSLMFSTFLGGRGWES ITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNAFVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVV GATNSSDFPTTSGAYDPSFNGSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASANFPTTPNASDPSLSGFFNAF VSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVGSTQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDH NAIHPPSSITLQWQSIDNTVHHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF SFTVRFAIYLPLTIR
Sequences:
>Translated_735_residues MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGNVYVAGETASTDFPTTPEAYD RSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALTLDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSR LNGDLTTLLASTFLGGSRESNGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKLNSDLSSLMFSTFLGGRGWES ITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNAFVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVV GATNSSDFPTTSGAYDPSFNGSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASANFPTTPNASDPSLSGFFNAF VSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVGSTQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDH NAIHPPSSITLQWQSIDNTVHHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF SFTVRFAIYLPLTIR >Mature_735_residues MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGNVYVAGETASTDFPTTPEAYD RSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALTLDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSR LNGDLTTLLASTFLGGSRESNGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKLNSDLSSLMFSTFLGGRGWES ITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNAFVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVV GATNSSDFPTTSGAYDPSFNGSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASANFPTTPNASDPSLSGFFNAF VSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVGSTQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDH NAIHPPSSITLQWQSIDNTVHHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF SFTVRFAIYLPLTIR
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78498; Mature: 78498
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGN CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEEECCCC VYVAGETASTDFPTTPEAYDRSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALT EEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE LDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSRLNGDLTTLLASTFLGGSRES EECCCCEEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCC NGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT CCCCCCCEEEEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKL HHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH NSDLSSLMFSTFLGGRGWESITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNA HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH FVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVVGATNSSDFPTTSGAYDPSFN HHHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC GSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEEEEECCCCCCC SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCC NFPTTPNASDPSLSGFFNAFVSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCEEEEEEECCCEEEEEE STQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDHNAIHPPSSITLQWQSIDNTV CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCHH HHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF HHEEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCCEE SFTVRFAIYLPLTIR EEEEEEEEEEEEEEC >Mature Secondary Structure MKGSFADIPISPGVSDPSSDNRNGSFVIKLSSDLASLLASTFFNDRYSSIHGIAIDTQGN CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEEEECCCC VYVAGETASTDFPTTPEAYDRSYNGSHYDGFVSKLSNDLTTILASTFLGGNDTDEIKALT EEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE LDTRNNVYVVGTTSSLDFPTSSGAFARSYHGGMTDAFVSRLNGDLTTLLASTFLGGSRES EECCCCEEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCC NGNDRANSIVISNQNSIYVAGSTTSINFPTTSGTFDTSYHEGPEPDVKDAFVSKLSDDLT CCCCCCCEEEEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH TLFASTVLGGYNDDQINTLALDPHGNVYVAGWTGSSDFPTTPGTYDTSIDGYADAFISKL HHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH NSDLSSLMFSTFLGGRGWESITAFAFDIQGNIYVAGATSSADFPTTPDAYNPSFNHSYNA HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH FVSKLNSNLSILQASTFLGGSAGDIIADLTLDGNGDVYVVGATNSSDFPTTSGAYDPSFN HHHHHCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC GSNDFYDDAFVSKLDGTLAHLIASTFLGGLYIDYAVAVTTDSQRNVYVVGVTWSNDFPAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEEEEECCCCCCC SGVYNSSFNGYEDGFVSKLSNDLSTLLASTFFGGSHRDLPGDIAWTRQGTLVVAGSTASA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCC NFPTTPNASDPSLSGFFNAFVSNFSSDLATLRFSTFLGGSQWDEATAIAIDHRDTIYVVG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCEEEEEEECCCEEEEEE STQSTDFPMTTGAYATTLRGSEDTFISKLTYTFTKTSPDHNAIHPPSSITLQWQSIDNTV CCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCHH HHYRYCLATTPDCTPTINVGNRTSVTITNVSPDTTYYWQVRACADSDCTTFMDADNGQHF HHEEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCCEE SFTVRFAIYLPLTIR EEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA