| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525453
Identifier: 222525453
GI number: 222525453
Start: 2790729
End: 2791598
Strand: Reverse
Name: 222525453
Synonym: Chy400_2201
Alternate gene names: NA
Gene position: 2791598-2790729 (Counterclockwise)
Preceding gene: 222525454
Following gene: 222525444
Centisome position: 52.98
GC content: 51.03
Gene sequence:
>870_bases ATGCATAGCATCATTGTTAACCCGGTATTGACCCGTGAACTCTTCGGTCGGATTCGTGGACGCAATGCCTGGCTTATTCT GAGCGGCTACCTGACTATCATTGGCGCTATTACGCTGCTAATTTATGCGGTATTTATCAGCTCGGCCAGCCCAAATGACC CTAACACGGCCCGTACCATCGGTAAAAGCATCTTTTTCACTGTGATGACTGCGGCGCTGGTACAGGTTTGCTTTCTGTCA CCTTCACTGACAGCAGGGGCAATTGTCGGTGAAAAAGAACGCCAGACTTACGATTTACTGCTTGCCTCGTTGTTGTCACC ACTTCAGATCATCACCGGTAAGCTCTTGTCAGCAATTGCGTTTGCATTGTTGCTCATCACGGCTTCTCTCCCAATTGCCG GTCTATCCCTTCTTTTTGGCGGCATTACTGCACAAGAAATCCTGATCGGGGTGATCAGTTTGTTGATCACGGCCATCTGC TATGCAGCAATTGGCCTTTTCTGGTCAACGGTGATGCGCTCGACGCTTGGTGCAACGGTAATGGCGCAGGGAACGGTGAT CGCCATTCTGTTGCTGGTACCATTTCTCTTCTTCGTGATTTCACTGTTGATCGGCGCGTTTGATGCCGATCCTTCGCCGC TCTACGTCTACACCATGGGGCCATTCATTTGCCTGCATCCGTTTATTGCCCTGGGGATAACGGCTACCATCCTTGAGGAA GGCGGCGATCCATGGCTCTGGACAGTTCCTTCGTCTGTCGGCAATCTCACAGTACCCTCACCCTGGCTGGTCTATATAGC GCTTATGATTATCGTCACGGTGATTTGTTTAAGTCTGGCCCTGCAGCGGATACGTCCGGCTGAAGAATAG
Upstream 100 bases:
>100_bases TAATGGTGACAGGTAACACGTCTCGCTTGAATCTGCACCCTCTCAACAGCAGAGGCGCGATAACACGCATCCAGACTCGT CCAGCGGCAAAGGTATACGT
Downstream 100 bases:
>100_bases GCGGAATACGGGTGACAGTGACGTGGGATAAGTATATGATAACCCAAGTTGCTACCTTTATCACCACAGAGACACAGAGG ACACAGAGGATGGGTAGAAT
Product: ABC-2 type transporter
Products: NA
Alternate protein names: ABC Transporter Permease
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MHSIIVNPVLTRELFGRIRGRNAWLILSGYLTIIGAITLLIYAVFISSASPNDPNTARTIGKSIFFTVMTAALVQVCFLS PSLTAGAIVGEKERQTYDLLLASLLSPLQIITGKLLSAIAFALLLITASLPIAGLSLLFGGITAQEILIGVISLLITAIC YAAIGLFWSTVMRSTLGATVMAQGTVIAILLLVPFLFFVISLLIGAFDADPSPLYVYTMGPFICLHPFIALGITATILEE GGDPWLWTVPSSVGNLTVPSPWLVYIALMIIVTVICLSLALQRIRPAEE
Sequences:
>Translated_289_residues MHSIIVNPVLTRELFGRIRGRNAWLILSGYLTIIGAITLLIYAVFISSASPNDPNTARTIGKSIFFTVMTAALVQVCFLS PSLTAGAIVGEKERQTYDLLLASLLSPLQIITGKLLSAIAFALLLITASLPIAGLSLLFGGITAQEILIGVISLLITAIC YAAIGLFWSTVMRSTLGATVMAQGTVIAILLLVPFLFFVISLLIGAFDADPSPLYVYTMGPFICLHPFIALGITATILEE GGDPWLWTVPSSVGNLTVPSPWLVYIALMIIVTVICLSLALQRIRPAEE >Mature_289_residues MHSIIVNPVLTRELFGRIRGRNAWLILSGYLTIIGAITLLIYAVFISSASPNDPNTARTIGKSIFFTVMTAALVQVCFLS PSLTAGAIVGEKERQTYDLLLASLLSPLQIITGKLLSAIAFALLLITASLPIAGLSLLFGGITAQEILIGVISLLITAIC YAAIGLFWSTVMRSTLGATVMAQGTVIAILLLVPFLFFVISLLIGAFDADPSPLYVYTMGPFICLHPFIALGITATILEE GGDPWLWTVPSSVGNLTVPSPWLVYIALMIIVTVICLSLALQRIRPAEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30907; Mature: 30907
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSIIVNPVLTRELFGRIRGRNAWLILSGYLTIIGAITLLIYAVFISSASPNDPNTARTI CCCEECCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GKSIFFTVMTAALVQVCFLSPSLTAGAIVGEKERQTYDLLLASLLSPLQIITGKLLSAIA HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALLLITASLPIAGLSLLFGGITAQEILIGVISLLITAICYAAIGLFWSTVMRSTLGATV HHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAQGTVIAILLLVPFLFFVISLLIGAFDADPSPLYVYTMGPFICLHPFIALGITATILEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC GGDPWLWTVPSSVGNLTVPSPWLVYIALMIIVTVICLSLALQRIRPAEE CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHSIIVNPVLTRELFGRIRGRNAWLILSGYLTIIGAITLLIYAVFISSASPNDPNTARTI CCCEECCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GKSIFFTVMTAALVQVCFLSPSLTAGAIVGEKERQTYDLLLASLLSPLQIITGKLLSAIA HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALLLITASLPIAGLSLLFGGITAQEILIGVISLLITAICYAAIGLFWSTVMRSTLGATV HHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAQGTVIAILLLVPFLFFVISLLIGAFDADPSPLYVYTMGPFICLHPFIALGITATILEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC GGDPWLWTVPSSVGNLTVPSPWLVYIALMIIVTVICLSLALQRIRPAEE CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA