| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525423
Identifier: 222525423
GI number: 222525423
Start: 2746533
End: 2747486
Strand: Reverse
Name: 222525423
Synonym: Chy400_2168
Alternate gene names: NA
Gene position: 2747486-2746533 (Counterclockwise)
Preceding gene: 222525424
Following gene: 222525422
Centisome position: 52.14
GC content: 53.25
Gene sequence:
>954_bases ATGCTCTCGCGCGTTGCCGATAACCTTTTCTGGATGAGTCGCTACCTCGAACGAACCGAGCATACCGCTCGCCTGATTGG GGTTGGACTGACCCAGATTCTCGATCAGACACCGCAAGCCCTCGTACCACGATGGCAGCGTCTGTTAGCCGCCTTGCATG TTGAACTGCCAGGCGATAGTCTGAACGATCTGCAAAGCATTACTCGTCTCTTAACTACTGATGCGACGAATCCGGCCTCG ATCAGAGCCTGTATGGCACGGGCACGCGAAAATGCGCGCCAGGTACGCGAACAGATCAGTTCAGAGATGTGGGAGCATAT CAATCAGCTCTACCTGAATGTACAGGCGATCAGTATCGAGCAAATCTGGCAAGACGAACCGGTCGAATTCTATCAGATGA TCAAAGAGCGGCTGCACTTAATTCAGGGCATTACCGATGCTACCATGAACCACGGTGAGGGCTGGCGTTTTATTCAGGTG GGGCGTTATCTCGAACGGATTTGGGCAACAACGCTGCTGCTCGAAGTCTTCTTCCGGCCCTATTTAAGCGGCAATGAGAG CACCATTGATGCAATTGATTGGGTTGCACTGCTGAAGTGTTGTACGGCGTTTGAAGCCTATTGCAAGGTGTATACTGCCG ATGTGCAGCCGGCGCGTGTCGCCGAATTTCTCTTGCTCAATGCCGAAAGTCCGCGTTCGATCAGATTTGCCGCCGATCAG GTACAGATGAGCCTGGAACAAATCGGTCAGCTTGCCGGTACCCGTCACGCGGCACGAGCCGAACGATTGGCCGGGCGTCT CCGTGCCCAACTCGATTATGGTCAGGTTGACGAAATTATCGCCGATAACCTGCTGCTCTTTCTCAGCCAGATTCGGCAAC AATGTAGCGCAATCCATGATGCGATTTACCAGGCCTACATCAGCTATCCGATTGATCAGGCACTACCGCAGTAG
Upstream 100 bases:
>100_bases GCGGCGGTAGCAAAGACACCTGGGTGCTGTACTGACGAGGGATCAGGGCCGGTCAGCGGAATGCAGGACAGGAAAGCAAT GATACGGATGCAGGAAATGT
Downstream 100 bases:
>100_bases GGCCTGGATATAAGCGCTTTGCGAGCGTCGGTATATGTACTACTCGATCCTGCATAAGACGCGCTTTCGCTACAGCGCGC CGGTGACCGAAAGTCAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MLSRVADNLFWMSRYLERTEHTARLIGVGLTQILDQTPQALVPRWQRLLAALHVELPGDSLNDLQSITRLLTTDATNPAS IRACMARARENARQVREQISSEMWEHINQLYLNVQAISIEQIWQDEPVEFYQMIKERLHLIQGITDATMNHGEGWRFIQV GRYLERIWATTLLLEVFFRPYLSGNESTIDAIDWVALLKCCTAFEAYCKVYTADVQPARVAEFLLLNAESPRSIRFAADQ VQMSLEQIGQLAGTRHAARAERLAGRLRAQLDYGQVDEIIADNLLLFLSQIRQQCSAIHDAIYQAYISYPIDQALPQ
Sequences:
>Translated_317_residues MLSRVADNLFWMSRYLERTEHTARLIGVGLTQILDQTPQALVPRWQRLLAALHVELPGDSLNDLQSITRLLTTDATNPAS IRACMARARENARQVREQISSEMWEHINQLYLNVQAISIEQIWQDEPVEFYQMIKERLHLIQGITDATMNHGEGWRFIQV GRYLERIWATTLLLEVFFRPYLSGNESTIDAIDWVALLKCCTAFEAYCKVYTADVQPARVAEFLLLNAESPRSIRFAADQ VQMSLEQIGQLAGTRHAARAERLAGRLRAQLDYGQVDEIIADNLLLFLSQIRQQCSAIHDAIYQAYISYPIDQALPQ >Mature_317_residues MLSRVADNLFWMSRYLERTEHTARLIGVGLTQILDQTPQALVPRWQRLLAALHVELPGDSLNDLQSITRLLTTDATNPAS IRACMARARENARQVREQISSEMWEHINQLYLNVQAISIEQIWQDEPVEFYQMIKERLHLIQGITDATMNHGEGWRFIQV GRYLERIWATTLLLEVFFRPYLSGNESTIDAIDWVALLKCCTAFEAYCKVYTADVQPARVAEFLLLNAESPRSIRFAADQ VQMSLEQIGQLAGTRHAARAERLAGRLRAQLDYGQVDEIIADNLLLFLSQIRQQCSAIHDAIYQAYISYPIDQALPQ
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36318; Mature: 36318
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRVADNLFWMSRYLERTEHTARLIGVGLTQILDQTPQALVPRWQRLLAALHVELPGDS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC LNDLQSITRLLTTDATNPASIRACMARARENARQVREQISSEMWEHINQLYLNVQAISIE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHH QIWQDEPVEFYQMIKERLHLIQGITDATMNHGEGWRFIQVGRYLERIWATTLLLEVFFRP HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YLSGNESTIDAIDWVALLKCCTAFEAYCKVYTADVQPARVAEFLLLNAESPRSIRFAADQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH VQMSLEQIGQLAGTRHAARAERLAGRLRAQLDYGQVDEIIADNLLLFLSQIRQQCSAIHD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AIYQAYISYPIDQALPQ HHHHHHHHCCHHHCCCC >Mature Secondary Structure MLSRVADNLFWMSRYLERTEHTARLIGVGLTQILDQTPQALVPRWQRLLAALHVELPGDS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC LNDLQSITRLLTTDATNPASIRACMARARENARQVREQISSEMWEHINQLYLNVQAISIE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHH QIWQDEPVEFYQMIKERLHLIQGITDATMNHGEGWRFIQVGRYLERIWATTLLLEVFFRP HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YLSGNESTIDAIDWVALLKCCTAFEAYCKVYTADVQPARVAEFLLLNAESPRSIRFAADQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH VQMSLEQIGQLAGTRHAARAERLAGRLRAQLDYGQVDEIIADNLLLFLSQIRQQCSAIHD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AIYQAYISYPIDQALPQ HHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA