| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is thrC [H]
Identifier: 222525356
GI number: 222525356
Start: 2671057
End: 2672385
Strand: Direct
Name: thrC [H]
Synonym: Chy400_2101
Alternate gene names: 222525356
Gene position: 2671057-2672385 (Clockwise)
Preceding gene: 222525355
Following gene: 222525357
Centisome position: 50.69
GC content: 56.28
Gene sequence:
>1329_bases ATGTATCACGCATGGTTTGCTGCCCAGGATGACCCAAACGAACGTTATCCTCTGACCGAGGTCGTGTACTACAGCCGGTC GGGAGGCTTACTCGAAGTACAGCATGATATGGCAGCGTTGGCCCAACGCAGCCCGGAAGAATGGAAGCGCCTGTTTGATG AGCGCTGGATGCGGACAGCCTGGCCCTATGGTAGTGGGGTGTGGGGGAAGAAAGAGTGGGTCTGCCCGATTGTATCTGAC GACAACGTGGTCAGTATGTTTGAGGGTGGAACCAACCTGTTTTGGGCCGAGCGTTTCGGGCGTGAAATCGGGCTGGAAGA CCTCTGGATCAAGATGTGTGGCAATTCTCACACCGGTTCGTTCAAAGATCTCGGTATGACAGTGCTGGTTAGTGTGGTCA AGCAGATGATCAGCGAGGGCAAGCCGATCCGGGCAATCGCCTGCGCCTCAACCGGCGATACGTCTGCGGCACTGGCGGCC TACGGAGCAGCAGCCGGCATTCCTACCATTGTCTTCCTGCCGAAAGGGAAGGTAAGTATCGCTCAACTGGTACAACCGGT GGCCCACGGTGCGCTGGTACTGGCGCTTGATACCGATTTTGATGGCTGTATGCGGATCGTGCGCGAGATTACTGCCAATC CCGACAACGGTATCTACCTTGCCAATTCGCTCAATTCACTGCGGGTCGAAGGGCAGAAGACGGTTGGGATCGAGATTGTA CAGCAATTTGACTGGGAAGTGCCAGACTGGATCATCATTCCGGGTGGCAATCTAGGCAACACCTTTGCTCTGGGCAAGGG TTTGTTGATGATGCACGAACTGGGCCTGATTGATCGACTGCCACGGATCGTCACGGCGCAGGCCGCCAATGCCAACCCAC TCTACCGCTCGTACCTAACCGGTTTTCGCGAGTATGAGCCGATTAAGGCTCAGCCTACTGCCGCCAGTGCAATTCAGATT GGCGATCCGGTAAGCATCAATCGCGCAATCAGCATTCTCAAACGCTTCAACGGCATCGTCGAACAGGCGACCGAACAGGA GCTGGCCGATGCTGCGGCTCGCGCTGATCGAACTGGCGCTTACGCCTGTCCACATACTGGGGTCGCGCTGGCAGCCCTGA TCAAACTGGTGGAACGGGGTGAGATCAAGCGAAGTGATCGGGTTGTTGTCATCTCAACTGCTCACGGCCTCAAGTTCAGC CGCTTCAAAGTAGAGTATCATGAAGGTACGCTCCGCGATGTTGTCGGGCAGTACACCAATCCCCCAATAGAATTACCGCC TGACGTGGACGCGGTGCGCCGGGCAATTGCCCAGCGGTTTGGAGATTGA
Upstream 100 bases:
>100_bases GTACGTGCGGCTGGCCCCACCCGGATTTTGGCGCACCGAGGCTGAACGGATTCTGGCCCAAATTCAGGCTGAACTGGAAT AGGTTGCAGGAGCGAATGAT
Downstream 100 bases:
>100_bases GGCTCGAACTAAAGAATGTCGGACAATCACCGACGATGAGAGCAACAGCAGTGTGATACAGGTGCAACTGTCATCTGCCT TGCTCTTCATCGGTGCGGTG
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MYHAWFAAQDDPNERYPLTEVVYYSRSGGLLEVQHDMAALAQRSPEEWKRLFDERWMRTAWPYGSGVWGKKEWVCPIVSD DNVVSMFEGGTNLFWAERFGREIGLEDLWIKMCGNSHTGSFKDLGMTVLVSVVKQMISEGKPIRAIACASTGDTSAALAA YGAAAGIPTIVFLPKGKVSIAQLVQPVAHGALVLALDTDFDGCMRIVREITANPDNGIYLANSLNSLRVEGQKTVGIEIV QQFDWEVPDWIIIPGGNLGNTFALGKGLLMMHELGLIDRLPRIVTAQAANANPLYRSYLTGFREYEPIKAQPTAASAIQI GDPVSINRAISILKRFNGIVEQATEQELADAAARADRTGAYACPHTGVALAALIKLVERGEIKRSDRVVVISTAHGLKFS RFKVEYHEGTLRDVVGQYTNPPIELPPDVDAVRRAIAQRFGD
Sequences:
>Translated_442_residues MYHAWFAAQDDPNERYPLTEVVYYSRSGGLLEVQHDMAALAQRSPEEWKRLFDERWMRTAWPYGSGVWGKKEWVCPIVSD DNVVSMFEGGTNLFWAERFGREIGLEDLWIKMCGNSHTGSFKDLGMTVLVSVVKQMISEGKPIRAIACASTGDTSAALAA YGAAAGIPTIVFLPKGKVSIAQLVQPVAHGALVLALDTDFDGCMRIVREITANPDNGIYLANSLNSLRVEGQKTVGIEIV QQFDWEVPDWIIIPGGNLGNTFALGKGLLMMHELGLIDRLPRIVTAQAANANPLYRSYLTGFREYEPIKAQPTAASAIQI GDPVSINRAISILKRFNGIVEQATEQELADAAARADRTGAYACPHTGVALAALIKLVERGEIKRSDRVVVISTAHGLKFS RFKVEYHEGTLRDVVGQYTNPPIELPPDVDAVRRAIAQRFGD >Mature_442_residues MYHAWFAAQDDPNERYPLTEVVYYSRSGGLLEVQHDMAALAQRSPEEWKRLFDERWMRTAWPYGSGVWGKKEWVCPIVSD DNVVSMFEGGTNLFWAERFGREIGLEDLWIKMCGNSHTGSFKDLGMTVLVSVVKQMISEGKPIRAIACASTGDTSAALAA YGAAAGIPTIVFLPKGKVSIAQLVQPVAHGALVLALDTDFDGCMRIVREITANPDNGIYLANSLNSLRVEGQKTVGIEIV QQFDWEVPDWIIIPGGNLGNTFALGKGLLMMHELGLIDRLPRIVTAQAANANPLYRSYLTGFREYEPIKAQPTAASAIQI GDPVSINRAISILKRFNGIVEQATEQELADAAARADRTGAYACPHTGVALAALIKLVERGEIKRSDRVVVISTAHGLKFS RFKVEYHEGTLRDVVGQYTNPPIELPPDVDAVRRAIAQRFGD
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786185, Length=343, Percent_Identity=25.9475218658892, Blast_Score=76, Evalue=5e-15,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 48574; Mature: 48574
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHAWFAAQDDPNERYPLTEVVYYSRSGGLLEVQHDMAALAQRSPEEWKRLFDERWMRTA CCCEEEECCCCCCCCCCHHHEEEEECCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHC WPYGSGVWGKKEWVCPIVSDDNVVSMFEGGTNLFWAERFGREIGLEDLWIKMCGNSHTGS CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEHHHHHCHHCCHHHHHHHHCCCCCCCC FKDLGMTVLVSVVKQMISEGKPIRAIACASTGDTSAALAAYGAAAGIPTIVFLPKGKVSI HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHH AQLVQPVAHGALVLALDTDFDGCMRIVREITANPDNGIYLANSLNSLRVEGQKTVGIEIV HHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCHHHHHHH QQFDWEVPDWIIIPGGNLGNTFALGKGLLMMHELGLIDRLPRIVTAQAANANPLYRSYLT HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHH GFREYEPIKAQPTAASAIQIGDPVSINRAISILKRFNGIVEQATEQELADAAARADRTGA HHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YACPHTGVALAALIKLVERGEIKRSDRVVVISTAHGLKFSRFKVEYHEGTLRDVVGQYTN CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHCCC PPIELPPDVDAVRRAIAQRFGD CCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYHAWFAAQDDPNERYPLTEVVYYSRSGGLLEVQHDMAALAQRSPEEWKRLFDERWMRTA CCCEEEECCCCCCCCCCHHHEEEEECCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHC WPYGSGVWGKKEWVCPIVSDDNVVSMFEGGTNLFWAERFGREIGLEDLWIKMCGNSHTGS CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEHHHHHCHHCCHHHHHHHHCCCCCCCC FKDLGMTVLVSVVKQMISEGKPIRAIACASTGDTSAALAAYGAAAGIPTIVFLPKGKVSI HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHH AQLVQPVAHGALVLALDTDFDGCMRIVREITANPDNGIYLANSLNSLRVEGQKTVGIEIV HHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCHHHHHHH QQFDWEVPDWIIIPGGNLGNTFALGKGLLMMHELGLIDRLPRIVTAQAANANPLYRSYLT HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHH GFREYEPIKAQPTAASAIQIGDPVSINRAISILKRFNGIVEQATEQELADAAARADRTGA HHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YACPHTGVALAALIKLVERGEIKRSDRVVVISTAHGLKFSRFKVEYHEGTLRDVVGQYTN CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHHHCCC PPIELPPDVDAVRRAIAQRFGD CCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]