Click here to switch to the map view.

The map label for this gene is 222525347

Identifier: 222525347

GI number: 222525347

Start: 2662317

End: 2662688

Strand: Reverse

Name: 222525347

Synonym: Chy400_2092

Alternate gene names: NA

Gene position: 2662688-2662317 (Counterclockwise)

Preceding gene: 222525348

Following gene: 222525346

Centisome position: 50.54

GC content: 65.32

Gene sequence:

>372_bases
ATGAGCAGACATGATCTCACCGACGACCAATGGGCGGTGATCGAACCGCTTATCCCCAAGAAACCACGTGCGCGGGGTCG
TCCACGCAACGACGACCGCCGGACACTGAATGGTATGCTGTATGTGCTCCACACCGGCTGTGCCTGGGCAGACCTGCCAA
CGGAGTACGGGTCCCCCAGCACCTGCTGGCGACGATGGCACGCGTGGTCGCAGGACGGGACGTGGGAGCGCATCTGGCGC
ACCCTCCTGAGCCGCCTCGCTGCCGACGGCACGCTGGACTGGGCACACGCGTTGCTGGACGGCAGCGTCGTTCCGGCAAA
ACAAGGGGCACTGGTGGAGGCACAACGACGGTTGGTAACGGCGCGACGGTGA

Upstream 100 bases:

>100_bases
TTCGTACCGCCGGACACGACAGCGGATTGCCAGTCATCTAGGCGGATGACATACTGCTAGAACCTATTTCAAAAATGTCT
TCTTATGCTACAATAGTGGT

Downstream 100 bases:

>100_bases
TGGTCGTGGTCGATGGCACTGGCGTGCCCATCGGCCTGCACGTGGATAGCGCACAACCACACGAACGCACCCTGGCTGAA
GCGACGGTGCGGACCATTCG

Product: transposase IS5-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSRHDLTDDQWAVIEPLIPKKPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEYGSPSTCWRRWHAWSQDGTWERIWR
TLLSRLAADGTLDWAHALLDGSVVPAKQGALVEAQRRLVTARR

Sequences:

>Translated_123_residues
MSRHDLTDDQWAVIEPLIPKKPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEYGSPSTCWRRWHAWSQDGTWERIWR
TLLSRLAADGTLDWAHALLDGSVVPAKQGALVEAQRRLVTARR
>Mature_122_residues
SRHDLTDDQWAVIEPLIPKKPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEYGSPSTCWRRWHAWSQDGTWERIWRT
LLSRLAADGTLDWAHALLDGSVVPAKQGALVEAQRRLVTARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14154; Mature: 14023

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHDLTDDQWAVIEPLIPKKPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEYGSPS
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCHH
TCWRRWHAWSQDGTWERIWRTLLSRLAADGTLDWAHALLDGSVVPAKQGALVEAQRRLVT
HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
ARR
CCC
>Mature Secondary Structure 
SRHDLTDDQWAVIEPLIPKKPRARGRPRNDDRRTLNGMLYVLHTGCAWADLPTEYGSPS
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCHH
TCWRRWHAWSQDGTWERIWRTLLSRLAADGTLDWAHALLDGSVVPAKQGALVEAQRRLVT
HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
ARR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650732 [H]