| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525325
Identifier: 222525325
GI number: 222525325
Start: 2625056
End: 2627092
Strand: Direct
Name: 222525325
Synonym: Chy400_2067
Alternate gene names: NA
Gene position: 2625056-2627092 (Clockwise)
Preceding gene: 222525324
Following gene: 222525326
Centisome position: 49.82
GC content: 57.83
Gene sequence:
>2037_bases ATGCGGATAAGTATCACCTCACCGGCCAGCCTGCTTGCCCGCTGTTCTACCGGTCAACTCTGGTTGATCGGTATGTTGAT AGCAGCGCTGGTGGCAGGCTTTGTTCCAGCCGCCAGGGTGATACTGGCAACCGGCTTCTGGTTGATGGTACCTGGGTATC TGCTCGAACGTCGGATGCCTGGAGAACGTCCACATTGGCTTCTGCGTATCGCTATCTGGAATGGCCTGGGTTTGAGCCTT GTGCCGCTGCTCTATCTGTGGGTGACGGCGGTCGGGTTGGCGATACCGGTAGGGCTGCTGATAAGTGTGGCGATCCTGCT GGCCGTTGTTGCGCTGTACGATGCCTGGCGTGATCTGGCCCCGGTTCAGGTGCGATCATCGGTAACAGGCTGGTTGTTGC TGAGTGTACTGGCAATCAGTGCCTGGCTGCGGGCGGTACAGATTGCCGATCTGGCATTTCCGGCCTGGGTCGACTCGGTA CATCATGCCCTGATGGTGCGGGTTGCCGCCGAGACCGGACGGGTACCCTGGACACTGACCCCATATCTACCGGTCACCGA CATGCCATATCACTGGGGCTACCACGTGCTGATCGCGGCAGCATGGCATCTTGGCAGGAGTGACTTGCCGGCAATGATCT TATGGAGCGGGCAACTACTCAACTGGATACAAGGGTTTTCCGCTGCCGCACTGGCTTTCCTGATCTGGCGGCGACCGCTG GCAGCAGTGATCGCTGCCGCAATCGTGGGCTGTATTTCGTGGATGCCGGCATACTACGTCTCGTGGGGGCGGTATACACA GTTAAGTGGGTTATTACAGATTGTTGCGCTGGCAATAGGCTGGCAGCAATGCTTGGATGCCAATACGCGCCGTGAACGTT TGGGCTGGCTTTTCCTGAACACGCTGATCATCACCGGGTTGAGTCTGGTGCATATGCGCATGTTTGTGTTTGGTGGTGCG CTCATTGCTGTGCAAAGCACTGTCTGGGCATTACACCAGACACGCCCGGCAATCGTTAGCCGGCTGGTCGAGGCGATGGG AGCCGGCCTGGTAGCACTGATACTTGCCGGGCCATGGTGGTTCGTACTGGTGCGGCAGATCTTGCTACCGGCAGCAACCG GTGCGCGTAGCCTGACGAGTGGCGGTTCGTATGTGCAACTGAGCGACAGTCTGATGTGGATCGGACCGAACGAGTGGCTG GTCACGCTAGCGTTATTTGCTGGCGTGGTAGGCGTGTTTTACCGGCAACGGGCTGCTGCGGTGATGGTGCTTTGGGTAGG CGTGCTGGTTGTGCTGTCAAACCCCTGGTTGATCAGCTATCTGGCACCGCCTATCGGTCTGGTGTTGATCTTGTACGCCG TGGTGCAGCGCACGTGGCTTATCGGTGGCGTAGGGTTGCTGTTGCTGGCAATAAACCCCTTGACGGTACGCCTGCCCTTT CTCTGGCTACTGCCGGTTGACATTACAGCGATCAGCCTGTTTTTACCACTCAGCAATCTCATCGGTGGTAGCGTTGCCCT GATCTGGCCGCAGCGTCGTTGGACGCAGATGGCTGCTATCGCGCTGCTACTGGGGTGTACGCTGTGGGGGGCGTATCAAC AGCGCACAATTGTGAACCCGGTGACCATTCTGGCAACTTCAGCCGACCGGGTCGCCCTAACGTGGATCGCCGAACAGACA CCTCCCACAGCCCGATTTTTGATCAATGCTGCGCCCTGGTTGCCCGGTGTGGCGCGGGGAACGGATGGGGGGTGGTGGAT TTTACCCCTGACCGGACGCTGGACAAGTACGCCGCCGGTACTCTTCATCTATGGTGAAGCGGAGGATGTCCAGGCTACAC AACAACGCAGTCAGCGCATCATTGACCTCGGTAACGGGCAAGAGGTTGATATAGCGAGTCTGATAGCTGCCGAGCGGATT GATTATATCTACACCTCACCAAAGGGGCCATTGCGTCCTGAACTGTTTGCCGGACAGCCGGGTTATGAAGCGGTTTTTGC CCACGAGGGTATTGTTATTTATCGGGTAATCCGATGA
Upstream 100 bases:
>100_bases CCGGTGGTATGCTGTAATGCACAGTATTGTTCAAGAATAGAAGCCAGGCTTCTGACTACAGTCTGATTCGAGCCAGCCAC ATCGTTCACCAGGAACAGCT
Downstream 100 bases:
>100_bases TCAGATGCCGGGTGAGGGTAGGCGAGCAATCCGGCAAGGAATATACTTCCGCGTGATTGTCGCCTCTCTCCTGTCATGCA AGACACGGTGTTGCGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MRISITSPASLLARCSTGQLWLIGMLIAALVAGFVPAARVILATGFWLMVPGYLLERRMPGERPHWLLRIAIWNGLGLSL VPLLYLWVTAVGLAIPVGLLISVAILLAVVALYDAWRDLAPVQVRSSVTGWLLLSVLAISAWLRAVQIADLAFPAWVDSV HHALMVRVAAETGRVPWTLTPYLPVTDMPYHWGYHVLIAAAWHLGRSDLPAMILWSGQLLNWIQGFSAAALAFLIWRRPL AAVIAAAIVGCISWMPAYYVSWGRYTQLSGLLQIVALAIGWQQCLDANTRRERLGWLFLNTLIITGLSLVHMRMFVFGGA LIAVQSTVWALHQTRPAIVSRLVEAMGAGLVALILAGPWWFVLVRQILLPAATGARSLTSGGSYVQLSDSLMWIGPNEWL VTLALFAGVVGVFYRQRAAAVMVLWVGVLVVLSNPWLISYLAPPIGLVLILYAVVQRTWLIGGVGLLLLAINPLTVRLPF LWLLPVDITAISLFLPLSNLIGGSVALIWPQRRWTQMAAIALLLGCTLWGAYQQRTIVNPVTILATSADRVALTWIAEQT PPTARFLINAAPWLPGVARGTDGGWWILPLTGRWTSTPPVLFIYGEAEDVQATQQRSQRIIDLGNGQEVDIASLIAAERI DYIYTSPKGPLRPELFAGQPGYEAVFAHEGIVIYRVIR
Sequences:
>Translated_678_residues MRISITSPASLLARCSTGQLWLIGMLIAALVAGFVPAARVILATGFWLMVPGYLLERRMPGERPHWLLRIAIWNGLGLSL VPLLYLWVTAVGLAIPVGLLISVAILLAVVALYDAWRDLAPVQVRSSVTGWLLLSVLAISAWLRAVQIADLAFPAWVDSV HHALMVRVAAETGRVPWTLTPYLPVTDMPYHWGYHVLIAAAWHLGRSDLPAMILWSGQLLNWIQGFSAAALAFLIWRRPL AAVIAAAIVGCISWMPAYYVSWGRYTQLSGLLQIVALAIGWQQCLDANTRRERLGWLFLNTLIITGLSLVHMRMFVFGGA LIAVQSTVWALHQTRPAIVSRLVEAMGAGLVALILAGPWWFVLVRQILLPAATGARSLTSGGSYVQLSDSLMWIGPNEWL VTLALFAGVVGVFYRQRAAAVMVLWVGVLVVLSNPWLISYLAPPIGLVLILYAVVQRTWLIGGVGLLLLAINPLTVRLPF LWLLPVDITAISLFLPLSNLIGGSVALIWPQRRWTQMAAIALLLGCTLWGAYQQRTIVNPVTILATSADRVALTWIAEQT PPTARFLINAAPWLPGVARGTDGGWWILPLTGRWTSTPPVLFIYGEAEDVQATQQRSQRIIDLGNGQEVDIASLIAAERI DYIYTSPKGPLRPELFAGQPGYEAVFAHEGIVIYRVIR >Mature_678_residues MRISITSPASLLARCSTGQLWLIGMLIAALVAGFVPAARVILATGFWLMVPGYLLERRMPGERPHWLLRIAIWNGLGLSL VPLLYLWVTAVGLAIPVGLLISVAILLAVVALYDAWRDLAPVQVRSSVTGWLLLSVLAISAWLRAVQIADLAFPAWVDSV HHALMVRVAAETGRVPWTLTPYLPVTDMPYHWGYHVLIAAAWHLGRSDLPAMILWSGQLLNWIQGFSAAALAFLIWRRPL AAVIAAAIVGCISWMPAYYVSWGRYTQLSGLLQIVALAIGWQQCLDANTRRERLGWLFLNTLIITGLSLVHMRMFVFGGA LIAVQSTVWALHQTRPAIVSRLVEAMGAGLVALILAGPWWFVLVRQILLPAATGARSLTSGGSYVQLSDSLMWIGPNEWL VTLALFAGVVGVFYRQRAAAVMVLWVGVLVVLSNPWLISYLAPPIGLVLILYAVVQRTWLIGGVGLLLLAINPLTVRLPF LWLLPVDITAISLFLPLSNLIGGSVALIWPQRRWTQMAAIALLLGCTLWGAYQQRTIVNPVTILATSADRVALTWIAEQT PPTARFLINAAPWLPGVARGTDGGWWILPLTGRWTSTPPVLFIYGEAEDVQATQQRSQRIIDLGNGQEVDIASLIAAERI DYIYTSPKGPLRPELFAGQPGYEAVFAHEGIVIYRVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74362; Mature: 74362
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISITSPASLLARCSTGQLWLIGMLIAALVAGFVPAARVILATGFWLMVPGYLLERRMP CEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC GERPHWLLRIAIWNGLGLSLVPLLYLWVTAVGLAIPVGLLISVAILLAVVALYDAWRDLA CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVQVRSSVTGWLLLSVLAISAWLRAVQIADLAFPAWVDSVHHALMVRVAAETGRVPWTLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PYLPVTDMPYHWGYHVLIAAAWHLGRSDLPAMILWSGQLLNWIQGFSAAALAFLIWRRPL CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AAVIAAAIVGCISWMPAYYVSWGRYTQLSGLLQIVALAIGWQQCLDANTRRERLGWLFLN HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TLIITGLSLVHMRMFVFGGALIAVQSTVWALHQTRPAIVSRLVEAMGAGLVALILAGPWW HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCHHH FVLVRQILLPAATGARSLTSGGSYVQLSDSLMWIGPNEWLVTLALFAGVVGVFYRQRAAA HHHHHHHHHCCCCCCCHHCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH VMVLWVGVLVVLSNPWLISYLAPPIGLVLILYAVVQRTWLIGGVGLLLLAINPLTVRLPF HHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECH LWLLPVDITAISLFLPLSNLIGGSVALIWPQRRWTQMAAIALLLGCTLWGAYQQRTIVNP HEEEHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEECCC VTILATSADRVALTWIAEQTPPTARFLINAAPWLPGVARGTDGGWWILPLTGRWTSTPPV EEEEEECCCCEEEEEEECCCCCHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCE LFIYGEAEDVQATQQRSQRIIDLGNGQEVDIASLIAAERIDYIYTSPKGPLRPELFAGQP EEEECCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCCCCCCC GYEAVFAHEGIVIYRVIR CCCEEEECCCEEEEEEEC >Mature Secondary Structure MRISITSPASLLARCSTGQLWLIGMLIAALVAGFVPAARVILATGFWLMVPGYLLERRMP CEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC GERPHWLLRIAIWNGLGLSLVPLLYLWVTAVGLAIPVGLLISVAILLAVVALYDAWRDLA CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PVQVRSSVTGWLLLSVLAISAWLRAVQIADLAFPAWVDSVHHALMVRVAAETGRVPWTLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC PYLPVTDMPYHWGYHVLIAAAWHLGRSDLPAMILWSGQLLNWIQGFSAAALAFLIWRRPL CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AAVIAAAIVGCISWMPAYYVSWGRYTQLSGLLQIVALAIGWQQCLDANTRRERLGWLFLN HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH TLIITGLSLVHMRMFVFGGALIAVQSTVWALHQTRPAIVSRLVEAMGAGLVALILAGPWW HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCHHH FVLVRQILLPAATGARSLTSGGSYVQLSDSLMWIGPNEWLVTLALFAGVVGVFYRQRAAA HHHHHHHHHCCCCCCCHHCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH VMVLWVGVLVVLSNPWLISYLAPPIGLVLILYAVVQRTWLIGGVGLLLLAINPLTVRLPF HHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECH LWLLPVDITAISLFLPLSNLIGGSVALIWPQRRWTQMAAIALLLGCTLWGAYQQRTIVNP HEEEHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEECCC VTILATSADRVALTWIAEQTPPTARFLINAAPWLPGVARGTDGGWWILPLTGRWTSTPPV EEEEEECCCCEEEEEEECCCCCHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCE LFIYGEAEDVQATQQRSQRIIDLGNGQEVDIASLIAAERIDYIYTSPKGPLRPELFAGQP EEEECCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCEEEECCCCCCCCCCCCCCC GYEAVFAHEGIVIYRVIR CCCEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA