| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yicI [C]
Identifier: 222525308
GI number: 222525308
Start: 2598683
End: 2601127
Strand: Reverse
Name: yicI [C]
Synonym: Chy400_2050
Alternate gene names: 222525308
Gene position: 2601127-2598683 (Counterclockwise)
Preceding gene: 222525311
Following gene: 222525307
Centisome position: 49.37
GC content: 57.26
Gene sequence:
>2445_bases ATGTCGCAAGCCCCGGCACGGGTAGGACTGACCGATACCCGCTATTTTATGCCGTTATCCCGGCTTGGTGCCGTCCAGTC CATTGAACGAGGCATTCTTGCCGCACTCGACCATGAGTGGCTACGGGTGGAATGGATTCGCGAAGATATTGTGCGTTTGA AGATCAGTCGTGGCGGTCATTTTGATGAGCATCCGTCGTATGCCGTCTGCGTTGATCTGAATCATGCGCCGATACCGCCA TTTACCGTCGCCGAAACGACGACATCGCTGGTGTTGCGCAGTGCGCGGCTGGAGGTGATCATCGGTCGTGATCCGTTTAC GATTACGATCCGGCGGAGCGATGGTAGTTCGGTGATGACCACCGCAACCGGACCTGATGGGCGGCCATGGGCGTATGCAA CGCTCAATGATGCCTTCGCGTTTCATCGAGTTTGTGCCCGTGATGATGCCTTTCTCGGTTTGGGTGAGAAGACCGGACGC CTGAATCGGAAAGGGCGGGATTTTATCTTGTGGAATAACGATGTACTGAGTCCGCATGGTGAAGCCGAATTCGCCGTCGG TCGTGATCCCGCCGATCCGCGCACGAAGAATACCAGCACGGAGTTCGATCCCTATTACATCTCAATTCCGTTTTTCTACC ATCTCGATCAGACGGGGAATGCTGCCGGTTTTTTTCTTGACAATCCATACCGGGTGCATGTCGATTTTTCGCCTGCCGAG ACCTACGGCATCTGTGCGTTGGGTGGTCAATACACAGAGTATGTGCTGGCCGGGCCACGGATTGCCGATATTCTCGAAGG ATTCACCTGGTTAACCGGTCGGCTGGCGCCGCCACCAATCTGGGCGCTTGGCTACCATCAATGTCGCTGGCACCGCTATA GTCAGGCTGACATCCTGACTCTCGCAGCCCGACATCGTGAACGACGCATCCCGTGCGATACACTCTGGCTCGATATCGAG CATATGGATGGCTATCGCGTATTCACCTGGAATCACGAATTGTTCCCCGATCCGACAGCCCTCGCTCGCCAGTTGTACGA ACAGGGCTTTCGCCTGATCACAATTGTCGATCCCGGCGTGAAGGTCGATCCCGATTTTGCGTTATTCCGCGAGGGGGTGG CGCACGATCTGTTCTGTCGAGCGGCCAGTGGTGAGTTGTACATCGGGCAGGTCTGGCCCGGTCGCACGGCGTTCCCTGAT TTTGTGAAACCGGAAGCACGTACCTGGTGGGGCGAGCAGAATGCACGTCACGCGCAGTTGGGCATTGCCGGTATCTGGAA TGACATGAACGAACCGGCAACCGGTGATATTCCGCCGTATGCGATGCGCTTCAACGGTGGCCGCGAACCGCACGAACGCT ATCACAATCAGTACGCATTGTTGATGGCGATGGCGACGGTGGAAGGATTACACACTGCCTTCCCCAACCAGCGCACGTTT GTGCTGTCACGGGCCGGCTTTGCCGGGATTCAACGGTATGCCGCTAACTGGATGGGTGACAATTGTGCGCGTTGGGATCA TCTCTGGATGAGTATGCCGATGGCCATGGGGACAGCGCTATCCGGGCAGGCATTTATCGGCGCTGATATTGGCGGGTTTG CCGGTGACACCCAACCCGAACTTTTTGCCCGCTGGATGCAGTGTGCCGCGTTGACGCCATTCTGTCGCAATCACAGCGCC TACGGCCACATCGATCAGTATGTCTGGTCGTTTGGGCCGGCTATCGAGCAGATTGCCCGCAACGCGATTGAATTACGCTA TCGCCTCATGCCCTATCTGGTCACGGCCTTCATGCGAACCGTGGAAACCGGTGAACCGGTACAGCAACCGCTGGTCTTCG CCTATCAATACGACCGCTTAACTCTCGAGATAGACGATCAATTTCTGGTAGGGCGCGACCTGCTGGCTGCGCCGGTGTAT ACACCGGGCACGACGTCCCGACAGCTCTACCTGCCCGCCGGTGAGTGGTACGATTGGCATACCGACACGCGGTACGCCGG TGAGCAATTTGTGGTGATACCGGCACCGCTCGACCGCCTACCCCTCTTCGCCCGTGGCGGGGCCGTTATTCCACTCTGGC CGGATGCACCGGCTTCAACAATGGGCTACTACCCGGAAACCATCGAGTTACACCTCTTCATTCCAACGCACGATGGTGTC TACACCGCAGAGTTACACGAGGACGATGGGTTGACCCTGGCGTTTCAACAGGGTGCATATTACCGTACCCTGTTCCGGGT CGAACGCCGTGGTCAGGAACTCACGATCAGCGGTTCGACGCGCGGTGATGGTTTTGCTGAATGTGCCCGTACATCCTTCA CCCTTGTCGTTCACGGGGCAACCCCGGCGATGGCGGTGGTGAATGGAACACCCCAGGCGTTCGTGAATGGCCGAACGACA TTTACCAATCGCGGCGAAGCGTTTGTCGTCTCGTTCACGGTGTGA
Upstream 100 bases:
>100_bases CGCTCTCTTCAGATATTACTCTGTCATAAAGATAGCTCTCTCTATCTCCTTATGCTACAATCATCCCTCGATACCGCTTT TGCACATTGAGGAGTTCGCC
Downstream 100 bases:
>100_bases TGCGGTGTAGAGACAGCGAGAGCGCACTTCTGATCCTCTTCTCCCGCTGAGCAGCGCGGGAGAGGGGCCGGGGGTGAGGG TGTTCTCCCACCCTCCCGGC
Product: alpha-glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase II [H]
Number of amino acids: Translated: 814; Mature: 813
Protein sequence:
>814_residues MSQAPARVGLTDTRYFMPLSRLGAVQSIERGILAALDHEWLRVEWIREDIVRLKISRGGHFDEHPSYAVCVDLNHAPIPP FTVAETTTSLVLRSARLEVIIGRDPFTITIRRSDGSSVMTTATGPDGRPWAYATLNDAFAFHRVCARDDAFLGLGEKTGR LNRKGRDFILWNNDVLSPHGEAEFAVGRDPADPRTKNTSTEFDPYYISIPFFYHLDQTGNAAGFFLDNPYRVHVDFSPAE TYGICALGGQYTEYVLAGPRIADILEGFTWLTGRLAPPPIWALGYHQCRWHRYSQADILTLAARHRERRIPCDTLWLDIE HMDGYRVFTWNHELFPDPTALARQLYEQGFRLITIVDPGVKVDPDFALFREGVAHDLFCRAASGELYIGQVWPGRTAFPD FVKPEARTWWGEQNARHAQLGIAGIWNDMNEPATGDIPPYAMRFNGGREPHERYHNQYALLMAMATVEGLHTAFPNQRTF VLSRAGFAGIQRYAANWMGDNCARWDHLWMSMPMAMGTALSGQAFIGADIGGFAGDTQPELFARWMQCAALTPFCRNHSA YGHIDQYVWSFGPAIEQIARNAIELRYRLMPYLVTAFMRTVETGEPVQQPLVFAYQYDRLTLEIDDQFLVGRDLLAAPVY TPGTTSRQLYLPAGEWYDWHTDTRYAGEQFVVIPAPLDRLPLFARGGAVIPLWPDAPASTMGYYPETIELHLFIPTHDGV YTAELHEDDGLTLAFQQGAYYRTLFRVERRGQELTISGSTRGDGFAECARTSFTLVVHGATPAMAVVNGTPQAFVNGRTT FTNRGEAFVVSFTV
Sequences:
>Translated_814_residues MSQAPARVGLTDTRYFMPLSRLGAVQSIERGILAALDHEWLRVEWIREDIVRLKISRGGHFDEHPSYAVCVDLNHAPIPP FTVAETTTSLVLRSARLEVIIGRDPFTITIRRSDGSSVMTTATGPDGRPWAYATLNDAFAFHRVCARDDAFLGLGEKTGR LNRKGRDFILWNNDVLSPHGEAEFAVGRDPADPRTKNTSTEFDPYYISIPFFYHLDQTGNAAGFFLDNPYRVHVDFSPAE TYGICALGGQYTEYVLAGPRIADILEGFTWLTGRLAPPPIWALGYHQCRWHRYSQADILTLAARHRERRIPCDTLWLDIE HMDGYRVFTWNHELFPDPTALARQLYEQGFRLITIVDPGVKVDPDFALFREGVAHDLFCRAASGELYIGQVWPGRTAFPD FVKPEARTWWGEQNARHAQLGIAGIWNDMNEPATGDIPPYAMRFNGGREPHERYHNQYALLMAMATVEGLHTAFPNQRTF VLSRAGFAGIQRYAANWMGDNCARWDHLWMSMPMAMGTALSGQAFIGADIGGFAGDTQPELFARWMQCAALTPFCRNHSA YGHIDQYVWSFGPAIEQIARNAIELRYRLMPYLVTAFMRTVETGEPVQQPLVFAYQYDRLTLEIDDQFLVGRDLLAAPVY TPGTTSRQLYLPAGEWYDWHTDTRYAGEQFVVIPAPLDRLPLFARGGAVIPLWPDAPASTMGYYPETIELHLFIPTHDGV YTAELHEDDGLTLAFQQGAYYRTLFRVERRGQELTISGSTRGDGFAECARTSFTLVVHGATPAMAVVNGTPQAFVNGRTT FTNRGEAFVVSFTV >Mature_813_residues SQAPARVGLTDTRYFMPLSRLGAVQSIERGILAALDHEWLRVEWIREDIVRLKISRGGHFDEHPSYAVCVDLNHAPIPPF TVAETTTSLVLRSARLEVIIGRDPFTITIRRSDGSSVMTTATGPDGRPWAYATLNDAFAFHRVCARDDAFLGLGEKTGRL NRKGRDFILWNNDVLSPHGEAEFAVGRDPADPRTKNTSTEFDPYYISIPFFYHLDQTGNAAGFFLDNPYRVHVDFSPAET YGICALGGQYTEYVLAGPRIADILEGFTWLTGRLAPPPIWALGYHQCRWHRYSQADILTLAARHRERRIPCDTLWLDIEH MDGYRVFTWNHELFPDPTALARQLYEQGFRLITIVDPGVKVDPDFALFREGVAHDLFCRAASGELYIGQVWPGRTAFPDF VKPEARTWWGEQNARHAQLGIAGIWNDMNEPATGDIPPYAMRFNGGREPHERYHNQYALLMAMATVEGLHTAFPNQRTFV LSRAGFAGIQRYAANWMGDNCARWDHLWMSMPMAMGTALSGQAFIGADIGGFAGDTQPELFARWMQCAALTPFCRNHSAY GHIDQYVWSFGPAIEQIARNAIELRYRLMPYLVTAFMRTVETGEPVQQPLVFAYQYDRLTLEIDDQFLVGRDLLAAPVYT PGTTSRQLYLPAGEWYDWHTDTRYAGEQFVVIPAPLDRLPLFARGGAVIPLWPDAPASTMGYYPETIELHLFIPTHDGVY TAELHEDDGLTLAFQQGAYYRTLFRVERRGQELTISGSTRGDGFAECARTSFTLVVHGATPAMAVVNGTPQAFVNGRTTF TNRGEAFVVSFTV
Specific function: Unknown
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Homo sapiens, GI88900491, Length=570, Percent_Identity=36.8421052631579, Blast_Score=345, Evalue=9e-95, Organism=Homo sapiens, GI38202257, Length=570, Percent_Identity=36.8421052631579, Blast_Score=345, Evalue=1e-94, Organism=Homo sapiens, GI66346737, Length=561, Percent_Identity=34.0463458110517, Blast_Score=340, Evalue=5e-93, Organism=Homo sapiens, GI119393895, Length=750, Percent_Identity=30.5333333333333, Blast_Score=302, Evalue=1e-81, Organism=Homo sapiens, GI119393893, Length=750, Percent_Identity=30.5333333333333, Blast_Score=302, Evalue=1e-81, Organism=Homo sapiens, GI119393891, Length=750, Percent_Identity=30.5333333333333, Blast_Score=302, Evalue=1e-81, Organism=Homo sapiens, GI221316699, Length=712, Percent_Identity=30.4775280898876, Blast_Score=286, Evalue=4e-77, Organism=Homo sapiens, GI157364974, Length=748, Percent_Identity=27.2727272727273, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI310115361, Length=489, Percent_Identity=30.4703476482618, Blast_Score=213, Evalue=8e-55, Organism=Homo sapiens, GI153791946, Length=423, Percent_Identity=26.0047281323877, Blast_Score=104, Evalue=4e-22, Organism=Escherichia coli, GI2367256, Length=743, Percent_Identity=22.6110363391655, Blast_Score=170, Evalue=4e-43, Organism=Escherichia coli, GI2367323, Length=648, Percent_Identity=25.9259259259259, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17560798, Length=509, Percent_Identity=35.3634577603143, Blast_Score=338, Evalue=5e-93, Organism=Caenorhabditis elegans, GI17560800, Length=509, Percent_Identity=35.3634577603143, Blast_Score=338, Evalue=8e-93, Organism=Caenorhabditis elegans, GI71991189, Length=506, Percent_Identity=35.9683794466403, Blast_Score=331, Evalue=1e-90, Organism=Caenorhabditis elegans, GI71985706, Length=559, Percent_Identity=31.6636851520572, Blast_Score=235, Evalue=6e-62, Organism=Caenorhabditis elegans, GI32563849, Length=640, Percent_Identity=28.28125, Blast_Score=211, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6319706, Length=572, Percent_Identity=34.2657342657343, Blast_Score=298, Evalue=2e-81, Organism=Drosophila melanogaster, GI24643749, Length=624, Percent_Identity=32.6923076923077, Blast_Score=320, Evalue=2e-87, Organism=Drosophila melanogaster, GI24643753, Length=624, Percent_Identity=32.6923076923077, Blast_Score=320, Evalue=2e-87, Organism=Drosophila melanogaster, GI24643751, Length=624, Percent_Identity=32.6923076923077, Blast_Score=320, Evalue=2e-87, Organism=Drosophila melanogaster, GI24643746, Length=624, Percent_Identity=32.6923076923077, Blast_Score=320, Evalue=2e-87, Organism=Drosophila melanogaster, GI21357605, Length=624, Percent_Identity=32.6923076923077, Blast_Score=320, Evalue=2e-87, Organism=Drosophila melanogaster, GI24650054, Length=428, Percent_Identity=26.6355140186916, Blast_Score=115, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 91618; Mature: 91486
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00129 GLYCOSYL_HYDROL_F31_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAPARVGLTDTRYFMPLSRLGAVQSIERGILAALDHEWLRVEWIREDIVRLKISRGGH CCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCEEEEEECCCCC FDEHPSYAVCVDLNHAPIPPFTVAETTTSLVLRSARLEVIIGRDPFTITIRRSDGSSVMT CCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHEECEEEEEECCCCEEEEEEECCCCEEEE TATGPDGRPWAYATLNDAFAFHRVCARDDAFLGLGEKTGRLNRKGRDFILWNNDVLSPHG EECCCCCCCEEEEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCC EAEFAVGRDPADPRTKNTSTEFDPYYISIPFFYHLDQTGNAAGFFLDNPYRVHVDFSPAE CCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCC TYGICALGGQYTEYVLAGPRIADILEGFTWLTGRLAPPPIWALGYHQCRWHRYSQADILT CCEEEEECCCCEEEEECCCHHHHHHCCHHHHCCCCCCCCEEECCCHHHHCCCCCCCHHHH LAARHRERRIPCDTLWLDIEHMDGYRVFTWNHELFPDPTALARQLYEQGFRLITIVDPGV HHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCC KVDPDFALFREGVAHDLFCRAASGELYIGQVWPGRTAFPDFVKPEARTWWGEQNARHAQL EECCCHHHHHHCCHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCEEEE GIAGIWNDMNEPATGDIPPYAMRFNGGREPHERYHNQYALLMAMATVEGLHTAFPNQRTF EEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEE VLSRAGFAGIQRYAANWMGDNCARWDHLWMSMPMAMGTALSGQAFIGADIGGFAGDTQPE EEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHH LFARWMQCAALTPFCRNHSAYGHIDQYVWSFGPAIEQIARNAIELRYRLMPYLVTAFMRT HHHHHHHHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VETGEPVQQPLVFAYQYDRLTLEIDDQFLVGRDLLAAPVYTPGTTSRQLYLPAGEWYDWH HCCCCCHHCCEEEEEEECEEEEEECCCEEECCHHHCCCCCCCCCCCCEEEECCCCCCCCC TDTRYAGEQFVVIPAPLDRLPLFARGGAVIPLWPDAPASTMGYYPETIELHLFIPTHDGV CCCCCCCCEEEEEECCCCCCCEEECCCEEEEECCCCCCHHCCCCCCEEEEEEEEECCCCE YTAELHEDDGLTLAFQQGAYYRTLFRVERRGQELTISGSTRGDGFAECARTSFTLVVHGA EEEEEECCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEEECC TPAMAVVNGTPQAFVNGRTTFTNRGEAFVVSFTV CCEEEEECCCCCEEECCCEEEECCCCEEEEEEEC >Mature Secondary Structure SQAPARVGLTDTRYFMPLSRLGAVQSIERGILAALDHEWLRVEWIREDIVRLKISRGGH CCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCEEEEEECCCCC FDEHPSYAVCVDLNHAPIPPFTVAETTTSLVLRSARLEVIIGRDPFTITIRRSDGSSVMT CCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHEECEEEEEECCCCEEEEEEECCCCEEEE TATGPDGRPWAYATLNDAFAFHRVCARDDAFLGLGEKTGRLNRKGRDFILWNNDVLSPHG EECCCCCCCEEEEEHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCC EAEFAVGRDPADPRTKNTSTEFDPYYISIPFFYHLDQTGNAAGFFLDNPYRVHVDFSPAE CCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCEEEEEECCCCC TYGICALGGQYTEYVLAGPRIADILEGFTWLTGRLAPPPIWALGYHQCRWHRYSQADILT CCEEEEECCCCEEEEECCCHHHHHHCCHHHHCCCCCCCCEEECCCHHHHCCCCCCCHHHH LAARHRERRIPCDTLWLDIEHMDGYRVFTWNHELFPDPTALARQLYEQGFRLITIVDPGV HHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCC KVDPDFALFREGVAHDLFCRAASGELYIGQVWPGRTAFPDFVKPEARTWWGEQNARHAQL EECCCHHHHHHCCHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCEEEE GIAGIWNDMNEPATGDIPPYAMRFNGGREPHERYHNQYALLMAMATVEGLHTAFPNQRTF EEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEE VLSRAGFAGIQRYAANWMGDNCARWDHLWMSMPMAMGTALSGQAFIGADIGGFAGDTQPE EEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHH LFARWMQCAALTPFCRNHSAYGHIDQYVWSFGPAIEQIARNAIELRYRLMPYLVTAFMRT HHHHHHHHHHCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VETGEPVQQPLVFAYQYDRLTLEIDDQFLVGRDLLAAPVYTPGTTSRQLYLPAGEWYDWH HCCCCCHHCCEEEEEEECEEEEEECCCEEECCHHHCCCCCCCCCCCCEEEECCCCCCCCC TDTRYAGEQFVVIPAPLDRLPLFARGGAVIPLWPDAPASTMGYYPETIELHLFIPTHDGV CCCCCCCCEEEEEECCCCCCCEEECCCEEEEECCCCCCHHCCCCCCEEEEEEEEECCCCE YTAELHEDDGLTLAFQQGAYYRTLFRVERRGQELTISGSTRGDGFAECARTSFTLVVHGA EEEEEECCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEEECC TPAMAVVNGTPQAFVNGRTTFTNRGEAFVVSFTV CCEEEEECCCCCEEECCCEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10945254 [H]