| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525297
Identifier: 222525297
GI number: 222525297
Start: 2583351
End: 2584325
Strand: Reverse
Name: 222525297
Synonym: Chy400_2039
Alternate gene names: NA
Gene position: 2584325-2583351 (Counterclockwise)
Preceding gene: 222525304
Following gene: 222525293
Centisome position: 49.05
GC content: 53.03
Gene sequence:
>975_bases ATGGGCTTTCAATCATCAGACCTGGAGCAACTGCAACCGTATTGGATCGCTCATCACTGGATCGGACAAGTTCTTCTGCG TACTCCAGAGCTTCCCGGGATCATCGCTGTTTTATTGTGGATGGTTCTTGGTGGCGTTGTGTTGATAAATGCTCTACCGG CAGTATTGTGCAGCCTCTGGTTCCTGAGTCGATACCTGCTCATCCGCCAGACGTACCGGCTGCTGAATAACGGGCAGTAC CATTCGGCAATGCGGCTCGCCCAGATAGCCAAATCGCTCAATCCGTTCTCGGCTGACGTGCACTGGCTGCTGGGCCTCAT CGCACTCCAGCGCAATCGGCCACGGGTAGCGATAGACCACTTGAAGAAAGCGTGCCGGCTTGATCCTGACAATCCCCAAG TATATGCAGCGTTGAGTGCAGCGTTCGTTGAAGCTGAAGAGCCAAAGCTGGCTATTCAGTATGCAAAAAAAGCGCTTGCA ATGAACCCTGGATTGTATGGTGCAGCTATGGTGCTAAGCGATTGTACACCAGATAGTGAACAGGTCGAACACTATTTACG TCAGATGATCAATACTGTTCGACGTCCGGTTGAGCGTGCTGTTGCCTGCTGTGCCCTCGCTAATTATTTGATTGAGATAG GACGGCGTAGTGAAGCAGAATCTTTCCTGGCTCAGGTGATACCTCTTGTGCCGGCCTGTCCTCCGGCCAGTCGTGGGCAG CTTCATTACCGTCTCGGCGAATTGTTGACCGCCTGTGGCAAACACGATATGGCCCGCGATCAATTCTTGCTCAGCATCAA AATCGATCCCAGGGGCCCGTGTGCTGCCAACGCCTGGCGAGCGGCTGCACTTGGTTTCATTGAGGAGCATCGTTCGCGAC ATCATCAGCCGCTGGCAAGCCATGAAGTAGGCGGTACTGATGTGATAACTTCGTTAGAGGAAATGTCAAGCAAGCGACGT TCACGTTCGGGATGA
Upstream 100 bases:
>100_bases CGCAGACCCACGTATCGGGATGACACGGTATCGCAGCCACGTACAGTGAGCAGCCCTGCGCCATCACTGAGACGAAGCCA GCTGCGCGAAGGAGCTACCT
Downstream 100 bases:
>100_bases AGTGCCGCAGATGCAGAGCGGCAGATTGGTTCGGCGGGTTGAAACCCCGCCTCAATGCGTGGAAGCTCCTTCGGGGCTGA CCTGGCGGCGGGAAGGGGCC
Product: tetratricopeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MGFQSSDLEQLQPYWIAHHWIGQVLLRTPELPGIIAVLLWMVLGGVVLINALPAVLCSLWFLSRYLLIRQTYRLLNNGQY HSAMRLAQIAKSLNPFSADVHWLLGLIALQRNRPRVAIDHLKKACRLDPDNPQVYAALSAAFVEAEEPKLAIQYAKKALA MNPGLYGAAMVLSDCTPDSEQVEHYLRQMINTVRRPVERAVACCALANYLIEIGRRSEAESFLAQVIPLVPACPPASRGQ LHYRLGELLTACGKHDMARDQFLLSIKIDPRGPCAANAWRAAALGFIEEHRSRHHQPLASHEVGGTDVITSLEEMSSKRR SRSG
Sequences:
>Translated_324_residues MGFQSSDLEQLQPYWIAHHWIGQVLLRTPELPGIIAVLLWMVLGGVVLINALPAVLCSLWFLSRYLLIRQTYRLLNNGQY HSAMRLAQIAKSLNPFSADVHWLLGLIALQRNRPRVAIDHLKKACRLDPDNPQVYAALSAAFVEAEEPKLAIQYAKKALA MNPGLYGAAMVLSDCTPDSEQVEHYLRQMINTVRRPVERAVACCALANYLIEIGRRSEAESFLAQVIPLVPACPPASRGQ LHYRLGELLTACGKHDMARDQFLLSIKIDPRGPCAANAWRAAALGFIEEHRSRHHQPLASHEVGGTDVITSLEEMSSKRR SRSG >Mature_323_residues GFQSSDLEQLQPYWIAHHWIGQVLLRTPELPGIIAVLLWMVLGGVVLINALPAVLCSLWFLSRYLLIRQTYRLLNNGQYH SAMRLAQIAKSLNPFSADVHWLLGLIALQRNRPRVAIDHLKKACRLDPDNPQVYAALSAAFVEAEEPKLAIQYAKKALAM NPGLYGAAMVLSDCTPDSEQVEHYLRQMINTVRRPVERAVACCALANYLIEIGRRSEAESFLAQVIPLVPACPPASRGQL HYRLGELLTACGKHDMARDQFLLSIKIDPRGPCAANAWRAAALGFIEEHRSRHHQPLASHEVGGTDVITSLEEMSSKRRS RSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36108; Mature: 35977
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFQSSDLEQLQPYWIAHHWIGQVLLRTPELPGIIAVLLWMVLGGVVLINALPAVLCSLW CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FLSRYLLIRQTYRLLNNGQYHSAMRLAQIAKSLNPFSADVHWLLGLIALQRNRPRVAIDH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHH LKKACRLDPDNPQVYAALSAAFVEAEEPKLAIQYAKKALAMNPGLYGAAMVLSDCTPDSE HHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH QVEHYLRQMINTVRRPVERAVACCALANYLIEIGRRSEAESFLAQVIPLVPACPPASRGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC LHYRLGELLTACGKHDMARDQFLLSIKIDPRGPCAANAWRAAALGFIEEHRSRHHQPLAS HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH HEVGGTDVITSLEEMSSKRRSRSG CCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GFQSSDLEQLQPYWIAHHWIGQVLLRTPELPGIIAVLLWMVLGGVVLINALPAVLCSLW CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FLSRYLLIRQTYRLLNNGQYHSAMRLAQIAKSLNPFSADVHWLLGLIALQRNRPRVAIDH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHH LKKACRLDPDNPQVYAALSAAFVEAEEPKLAIQYAKKALAMNPGLYGAAMVLSDCTPDSE HHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH QVEHYLRQMINTVRRPVERAVACCALANYLIEIGRRSEAESFLAQVIPLVPACPPASRGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC LHYRLGELLTACGKHDMARDQFLLSIKIDPRGPCAANAWRAAALGFIEEHRSRHHQPLAS HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH HEVGGTDVITSLEEMSSKRRSRSG CCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA