| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525274
Identifier: 222525274
GI number: 222525274
Start: 2552727
End: 2554808
Strand: Direct
Name: 222525274
Synonym: Chy400_2014
Alternate gene names: NA
Gene position: 2552727-2554808 (Clockwise)
Preceding gene: 222525273
Following gene: 222525275
Centisome position: 48.45
GC content: 55.38
Gene sequence:
>2082_bases ATGGTGTTGTTCTCGCGGCGAACTGTTCGCCTCTGGTTACTCTGTTTGCTCTGTATCATGATTATCACTGGCTGTGCATC ACGGCCAGTTGTATTAACTGGAACAGTTACCGATGCCTACACCGGTGCACCCGTTCCCAATGCTACGGTAGCGATTGGCG ATCTGACCCTAACCACTGATGAACAGGGGCGTTTTCAAACCGAACGCTGGCGACCCGAAGACACGCTGGCATTACAGGCA CCAGCGTATGAGCCGATAAGTCTACCCCTGGCCAGTCAACCCGGTGTGGGTGAGAGCGGTGTCTTTACAGTCACGATTAC AACAGCGCTTCGTCCCAACGTCCTTAGTGGTCGGGTAACCGATGCGTACACCGGCGCGCCGGTCAGTGGGGCCGAGGTGC TGTTGAATAATGACGATACCCTGCGCACAACGACTGATGCCGATGGGCAGTACACGCTAGCCGGTGTGCCTGAGTCGTTT ACCGTGACGGTACGCGCACCTGATTACGCTCCGGCGAGCGAGACAATTTCACGCGCGACCAGACTCGACGTCAGTGTGCG CCCGAACACGTTGCGCGGCCAGGTCACCAATGTGTATACCGGCGAACCCATAGCTGGTGCAACGGTGACACTGGCTGATG TGCGAACGACGACGGATGCCGAAGGGCGTTATCTGCTTCGTGATCTTCCTGCCGAACAGGGTGAGATCACTGTCGAAGCC GATGGTTTTGCAACAACGACACAACCGTTTACCCGCACGACAAGTCTCGACGTCACGCTTCGTCCCGATACGCTCATTGG ACAGCTTATCGACGCTACTACCGGTAAACCGGTGCCCAATGCGGCGATTATCGCCACCGAGACTCTGACCTCAACTGCCG TTGCATTTACTCGCATCAACGATAGTATCGAGGGTCGCTTCCGACTGCCCGACCTGCCTGAACGTGGTTTTGTGCAGGTA CTGGCTCCGGGGTATGCCAAGCGGGTGATCCCGATTGAGCCTGGTAATATGCCGCAGCAGATTGAGCTGGAACCCTTCTA CGTGCGGGGAATCTACATTACGGCAGCGGTGGCATCGGTGCCACGATTGGTTGATCGTTTTCTTGATCTGATTGATCGTA CCGAACTAAATGCGATAGTGATCGATATCAAGAGCGATCTGCGCGATGATCTGGGCATGGTCTACTATGACTCCCAGGTA CCGCTGGTCCGTGAACTGGGATTGAGCACGCCAAGGGTCGATTTCCAATCCATCCTGGCTAAAGCGAAAGAGCGTGGCAT CTACACGATTGCGCGCGTCCAGCTCTTTTCGCACGATAATGCGTTATCTGATGCGCGCCCTGAATGGTCAATCCGCCTGC GCTCAACCGGTGAGGTGTATGCCGACTATCCAGGACCTGGGATTCGTTACGCCTATCTCGATCCGACCAATCAGAATGTC TGGGATTACAATATCGCGCTGGCAGTTGAAGCGGCTCAGATGGGGTTTGACGAGATCAATTTTGATTACATCCGCTTCCC GGACTGGTTCGGTACCAGAGAAGAGTTTCGCGATAAGCTGCTGTTCAGCGAACCAATCGATCCGGTCGGCAATCCAGGTC GCATGTACGATGTCATTATCGAGTTCATGCAACGTGCCCACCACGCAGTAAATTCAGCCGGTGCCTTTATGTCAGTTGAT GTCTTTGGGCGGGTAGTGAATGGCCCTTCGCTCACCATTGCGCAGGATATGGCACGGATGGGTGAGCATACCGATTACGT TTGCCCAATGCCTTATCCATCGCTGTGGTGGGGTGGACTGGAGAACATTGCGGTGCCGGTCAAATTTCCGTATGAAACGC TCCAGATTGCAGTACGGAATGGTGGCCGTCAGATGGCAGGCAGTTATGGACGGCAACGCCCATGGCTTCAGGATCACACC GATCCCTGGTCGCCGGTAGTCGTCGAATACGGCCCGGCTGAAGTGCGTGCTCAGATTGACGCCACCGAAGAGCAACCGGA AGCTGCATCGGGTTGGCTACTCTACGACTCGGCGAATATTTACAAAGGTGCCTTCAACGGCGCCGTGCGCCCAACACCAT AG
Upstream 100 bases:
>100_bases TCAATCACTTGACAGCCGTCTATCGGCACTTTAAGATACGTTCAATCGGTGTTTGCCGAATGATGGCACGTTTCATTCCA ACTAAAGGAGTCTGCCAACC
Downstream 100 bases:
>100_bases CAACGGAGGAGTCGTCGACGAGTTTGCAGCGGGGCATTACTTATGATCCGACACACAGGGCTGAGACTAAGCCTGCTCAT CGCTCTGGCCGGCATGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MVLFSRRTVRLWLLCLLCIMIITGCASRPVVLTGTVTDAYTGAPVPNATVAIGDLTLTTDEQGRFQTERWRPEDTLALQA PAYEPISLPLASQPGVGESGVFTVTITTALRPNVLSGRVTDAYTGAPVSGAEVLLNNDDTLRTTTDADGQYTLAGVPESF TVTVRAPDYAPASETISRATRLDVSVRPNTLRGQVTNVYTGEPIAGATVTLADVRTTTDAEGRYLLRDLPAEQGEITVEA DGFATTTQPFTRTTSLDVTLRPDTLIGQLIDATTGKPVPNAAIIATETLTSTAVAFTRINDSIEGRFRLPDLPERGFVQV LAPGYAKRVIPIEPGNMPQQIELEPFYVRGIYITAAVASVPRLVDRFLDLIDRTELNAIVIDIKSDLRDDLGMVYYDSQV PLVRELGLSTPRVDFQSILAKAKERGIYTIARVQLFSHDNALSDARPEWSIRLRSTGEVYADYPGPGIRYAYLDPTNQNV WDYNIALAVEAAQMGFDEINFDYIRFPDWFGTREEFRDKLLFSEPIDPVGNPGRMYDVIIEFMQRAHHAVNSAGAFMSVD VFGRVVNGPSLTIAQDMARMGEHTDYVCPMPYPSLWWGGLENIAVPVKFPYETLQIAVRNGGRQMAGSYGRQRPWLQDHT DPWSPVVVEYGPAEVRAQIDATEEQPEAASGWLLYDSANIYKGAFNGAVRPTP
Sequences:
>Translated_693_residues MVLFSRRTVRLWLLCLLCIMIITGCASRPVVLTGTVTDAYTGAPVPNATVAIGDLTLTTDEQGRFQTERWRPEDTLALQA PAYEPISLPLASQPGVGESGVFTVTITTALRPNVLSGRVTDAYTGAPVSGAEVLLNNDDTLRTTTDADGQYTLAGVPESF TVTVRAPDYAPASETISRATRLDVSVRPNTLRGQVTNVYTGEPIAGATVTLADVRTTTDAEGRYLLRDLPAEQGEITVEA DGFATTTQPFTRTTSLDVTLRPDTLIGQLIDATTGKPVPNAAIIATETLTSTAVAFTRINDSIEGRFRLPDLPERGFVQV LAPGYAKRVIPIEPGNMPQQIELEPFYVRGIYITAAVASVPRLVDRFLDLIDRTELNAIVIDIKSDLRDDLGMVYYDSQV PLVRELGLSTPRVDFQSILAKAKERGIYTIARVQLFSHDNALSDARPEWSIRLRSTGEVYADYPGPGIRYAYLDPTNQNV WDYNIALAVEAAQMGFDEINFDYIRFPDWFGTREEFRDKLLFSEPIDPVGNPGRMYDVIIEFMQRAHHAVNSAGAFMSVD VFGRVVNGPSLTIAQDMARMGEHTDYVCPMPYPSLWWGGLENIAVPVKFPYETLQIAVRNGGRQMAGSYGRQRPWLQDHT DPWSPVVVEYGPAEVRAQIDATEEQPEAASGWLLYDSANIYKGAFNGAVRPTP >Mature_693_residues MVLFSRRTVRLWLLCLLCIMIITGCASRPVVLTGTVTDAYTGAPVPNATVAIGDLTLTTDEQGRFQTERWRPEDTLALQA PAYEPISLPLASQPGVGESGVFTVTITTALRPNVLSGRVTDAYTGAPVSGAEVLLNNDDTLRTTTDADGQYTLAGVPESF TVTVRAPDYAPASETISRATRLDVSVRPNTLRGQVTNVYTGEPIAGATVTLADVRTTTDAEGRYLLRDLPAEQGEITVEA DGFATTTQPFTRTTSLDVTLRPDTLIGQLIDATTGKPVPNAAIIATETLTSTAVAFTRINDSIEGRFRLPDLPERGFVQV LAPGYAKRVIPIEPGNMPQQIELEPFYVRGIYITAAVASVPRLVDRFLDLIDRTELNAIVIDIKSDLRDDLGMVYYDSQV PLVRELGLSTPRVDFQSILAKAKERGIYTIARVQLFSHDNALSDARPEWSIRLRSTGEVYADYPGPGIRYAYLDPTNQNV WDYNIALAVEAAQMGFDEINFDYIRFPDWFGTREEFRDKLLFSEPIDPVGNPGRMYDVIIEFMQRAHHAVNSAGAFMSVD VFGRVVNGPSLTIAQDMARMGEHTDYVCPMPYPSLWWGGLENIAVPVKFPYETLQIAVRNGGRQMAGSYGRQRPWLQDHT DPWSPVVVEYGPAEVRAQIDATEEQPEAASGWLLYDSANIYKGAFNGAVRPTP
Specific function: Unknown
COG id: COG1306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76204; Mature: 76204
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLFSRRTVRLWLLCLLCIMIITGCASRPVVLTGTVTDAYTGAPVPNATVAIGDLTLTTD CEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECC EQGRFQTERWRPEDTLALQAPAYEPISLPLASQPGVGESGVFTVTITTALRPNVLSGRVT CCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC DAYTGAPVSGAEVLLNNDDTLRTTTDADGQYTLAGVPESFTVTVRAPDYAPASETISRAT CCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHH RLDVSVRPNTLRGQVTNVYTGEPIAGATVTLADVRTTTDAEGRYLLRDLPAEQGEITVEA EEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCEEEEE DGFATTTQPFTRTTSLDVTLRPDTLIGQLIDATTGKPVPNAAIIATETLTSTAVAFTRIN CCCEECCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHEEEEEEEC DSIEGRFRLPDLPERGFVQVLAPGYAKRVIPIEPGNMPQQIELEPFYVRGIYITAAVASV CCCCCEEECCCCCCCCCEEEECCCCCCEEEEECCCCCCCEEECCEEEEEEEEEEHHHHHH PRLVDRFLDLIDRTELNAIVIDIKSDLRDDLGMVYYDSQVPLVRELGLSTPRVDFQSILA HHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCEEEECCCCCHHHHHCCCCCCCCHHHHHH KAKERGIYTIARVQLFSHDNALSDARPEWSIRLRSTGEVYADYPGPGIRYAYLDPTNQNV HHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEEECCCCCCE WDYNIALAVEAAQMGFDEINFDYIRFPDWFGTREEFRDKLLFSEPIDPVGNPGRMYDVII EEEEEEEEEEHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH EFMQRAHHAVNSAGAFMSVDVFGRVVNGPSLTIAQDMARMGEHTDYVCPMPYPSLWWGGL HHHHHHHHHHHCCCCEEEEEEHHEEECCCCCHHHHHHHHHCCCCCEECCCCCCHHHHCCC ENIAVPVKFPYETLQIAVRNGGRQMAGSYGRQRPWLQDHTDPWSPVVVEYGPAEVRAQID CCEEEEEECCHHHEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEC ATEEQPEAASGWLLYDSANIYKGAFNGAVRPTP CCCCCCCCCCCEEEEECCCEEECCCCCCCCCCC >Mature Secondary Structure MVLFSRRTVRLWLLCLLCIMIITGCASRPVVLTGTVTDAYTGAPVPNATVAIGDLTLTTD CEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEECC EQGRFQTERWRPEDTLALQAPAYEPISLPLASQPGVGESGVFTVTITTALRPNVLSGRVT CCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC DAYTGAPVSGAEVLLNNDDTLRTTTDADGQYTLAGVPESFTVTVRAPDYAPASETISRAT CCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHH RLDVSVRPNTLRGQVTNVYTGEPIAGATVTLADVRTTTDAEGRYLLRDLPAEQGEITVEA EEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCEEEEE DGFATTTQPFTRTTSLDVTLRPDTLIGQLIDATTGKPVPNAAIIATETLTSTAVAFTRIN CCCEECCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHEEEEEEEC DSIEGRFRLPDLPERGFVQVLAPGYAKRVIPIEPGNMPQQIELEPFYVRGIYITAAVASV CCCCCEEECCCCCCCCCEEEECCCCCCEEEEECCCCCCCEEECCEEEEEEEEEEHHHHHH PRLVDRFLDLIDRTELNAIVIDIKSDLRDDLGMVYYDSQVPLVRELGLSTPRVDFQSILA HHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCEEEECCCCCHHHHHCCCCCCCCHHHHHH KAKERGIYTIARVQLFSHDNALSDARPEWSIRLRSTGEVYADYPGPGIRYAYLDPTNQNV HHHHCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEEECCCCCCE WDYNIALAVEAAQMGFDEINFDYIRFPDWFGTREEFRDKLLFSEPIDPVGNPGRMYDVII EEEEEEEEEEHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH EFMQRAHHAVNSAGAFMSVDVFGRVVNGPSLTIAQDMARMGEHTDYVCPMPYPSLWWGGL HHHHHHHHHHHCCCCEEEEEEHHEEECCCCCHHHHHHHHHCCCCCEECCCCCCHHHHCCC ENIAVPVKFPYETLQIAVRNGGRQMAGSYGRQRPWLQDHTDPWSPVVVEYGPAEVRAQID CCEEEEEECCHHHEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEC ATEEQPEAASGWLLYDSANIYKGAFNGAVRPTP CCCCCCCCCCCEEEEECCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA