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The map label for this gene is pdtaR [H]

Identifier: 222525205

GI number: 222525205

Start: 2469584

End: 2470171

Strand: Direct

Name: pdtaR [H]

Synonym: Chy400_1945

Alternate gene names: 222525205

Gene position: 2469584-2470171 (Clockwise)

Preceding gene: 222525204

Following gene: 222525206

Centisome position: 46.87

GC content: 58.33

Gene sequence:

>588_bases
ATGGCAGCGCGACTCTTAATTGCTGATGATGAAGCTTTGATCAGATTCCACCTGCGCGAAGTGTTGCTCGCGCTTGGCTA
CCTGATTGTCGGTGAAGCGGCTGATGGTCAACAGGCGATTGCTCTGACGCGCCAGATGCGACCCGATCTGGTCTTGCTCG
ACTACAAAATGCCACATCTCGACGGGATAGAAGCGGCGACCGTACTTCACAACGAAGGGCTGGCGCCGGTCATTCTCCTG
ACAGCTTCGGCTTCGCGCGAACTGGCTGAACGCGCCCGTGCAGCGGGTGTCTTCGGCTACCTGATCAAACCATTTCGCGA
TGGCGAACTCTTACCGTTGATAGAGGTCGTCCTGGCCCGCTGGCAGGCGTATCAGGCGCGGCGGAAAGAGATGCTGGCGT
TACGCGAACGCCTGGAGACTCGTCAGGAGATTGAGCACGCGAAGCACGTCTTGATGGAACAGCACGGCCTGACCGAAGGC
GAGGCATTTCGGCGTATCCAGCAACTGGCGATGCGCAATCGCAAAACCATGCGCGAGGTAGCGCAGGCCATTCTCCTGAC
CCATCAATTGTCGAGTGGGCAGAGGTGA

Upstream 100 bases:

>100_bases
CCGGACATCTTCTATACTGCGTATAGACGTTATATTCGCATTGATGCCACCTGCACGTCGCACTGCGGCGACGGCAGGTG
CTTATTGTTTTGGAGCACGC

Downstream 100 bases:

>100_bases
GGGGGAGCACTCCCCACTCCCCGCCCCTTCATGGTATCCTACAACCGAGTGTGCGCACGCCGGTGAGTTGCAACAGTAAT
GTGCGCACGGGCTTGTAGGA

Product: response regulator receiver and ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MAARLLIADDEALIRFHLREVLLALGYLIVGEAADGQQAIALTRQMRPDLVLLDYKMPHLDGIEAATVLHNEGLAPVILL
TASASRELAERARAAGVFGYLIKPFRDGELLPLIEVVLARWQAYQARRKEMLALRERLETRQEIEHAKHVLMEQHGLTEG
EAFRRIQQLAMRNRKTMREVAQAILLTHQLSSGQR

Sequences:

>Translated_195_residues
MAARLLIADDEALIRFHLREVLLALGYLIVGEAADGQQAIALTRQMRPDLVLLDYKMPHLDGIEAATVLHNEGLAPVILL
TASASRELAERARAAGVFGYLIKPFRDGELLPLIEVVLARWQAYQARRKEMLALRERLETRQEIEHAKHVLMEQHGLTEG
EAFRRIQQLAMRNRKTMREVAQAILLTHQLSSGQR
>Mature_194_residues
AARLLIADDEALIRFHLREVLLALGYLIVGEAADGQQAIALTRQMRPDLVLLDYKMPHLDGIEAATVLHNEGLAPVILLT
ASASRELAERARAAGVFGYLIKPFRDGELLPLIEVVLARWQAYQARRKEMLALRERLETRQEIEHAKHVLMEQHGLTEGE
AFRRIQQLAMRNRKTMREVAQAILLTHQLSSGQR

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=144, Percent_Identity=36.1111111111111, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786599, Length=123, Percent_Identity=36.5853658536585, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788191, Length=105, Percent_Identity=34.2857142857143, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI87082052, Length=132, Percent_Identity=34.8484848484849, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22086; Mature: 21955

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARLLIADDEALIRFHLREVLLALGYLIVGEAADGQQAIALTRQMRPDLVLLDYKMPHL
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
DGIEAATVLHNEGLAPVILLTASASRELAERARAAGVFGYLIKPFRDGELLPLIEVVLAR
CCCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
WQAYQARRKEMLALRERLETRQEIEHAKHVLMEQHGLTEGEAFRRIQQLAMRNRKTMREV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AQAILLTHQLSSGQR
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
AARLLIADDEALIRFHLREVLLALGYLIVGEAADGQQAIALTRQMRPDLVLLDYKMPHL
CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
DGIEAATVLHNEGLAPVILLTASASRELAERARAAGVFGYLIKPFRDGELLPLIEVVLAR
CCCHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
WQAYQARRKEMLALRERLETRQEIEHAKHVLMEQHGLTEGEAFRRIQQLAMRNRKTMREV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AQAILLTHQLSSGQR
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]