Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525185

Identifier: 222525185

GI number: 222525185

Start: 2439619

End: 2442135

Strand: Reverse

Name: 222525185

Synonym: Chy400_1924

Alternate gene names: NA

Gene position: 2442135-2439619 (Counterclockwise)

Preceding gene: 222525186

Following gene: 222525182

Centisome position: 46.35

GC content: 59.32

Gene sequence:

>2517_bases
ATGACCATGATTGAAACGCAGCTTCGCTCGCTACTGGTGACCACGAAGCCAATCCGCGACCTGACGATTGATGCGGTTAT
CGCGGCAACAAAGCGCGCCGAACAGCGGATTGCTCCGCTATGGCCATTACGCTACTTCGTGGCAGTCAATCCCTATTTGG
GGCTGATCGATCACACCTTTGCCGATGCTGCGCAGTTGCTGGCCCGGCGAACAGATGCCCGTATGACGGCACCCCGCGAC
TTTTACGCCCAGGCCATCAAGAGTGGGCGCATCACCGATGCCGATCTTGCTGCGGCAATTGCTGACGAGAAGCTGCCCTC
TCCGGCCCCGGCAAGCGTCGCTGCGCTGAAGGAGTTCGCATTCAGCAAAGATCCCGACCCGGCAACGACACCACTGCCTA
CTATTGCTGATGTCGCGACCACTGTTACCGGTATCAATTGGGCAGATTTCGTCACCGATGCAATCTCCACCTGGGCCGGC
GCATACTTCGATCTGGGTCAATCCTACTGGCGCTCACCGTGGGCGCAGTTGCCGGCTTATGCTGCCTGGCGGGCCGAGGC
CGCTCACGACCGCACTGCGCAGGCACGTGGTGTGCATGGCATGCGCCGGGCGCTCCGCGAACTACCTGAAACAGCGCTTG
AGACGATTGTCACTGCGGTGAAGATGCTCAACATCCCTGAACAAGGTTTGGAAGCCTATCTGCACCGACTGTTACTGACG
ATTCACGGTTGGGCCAGCTATGCCCGCTACCTGCGCTGGGATGCAGAACTCTACGGCGGTGAGGATCACACGCTGACCGA
CCTGCTGGCAATCCGTCTGGTGTGGGAAGTTGCACTCTGGCATAGTTTTGCCGACCGGGGTGTCGCCGAGGCGTGGCACA
AATGCAAGCCTGAACTGAGTAACGAACAACTGACGGAAACAGCCCGGTATGCGCTGGCCGGCAACATACTGCTCCAGCGT
GCCTTCGAGAAGTCGTATCAACGCCAATTGTTTGCCCGTCTCGGCACTGCCAGACCGGCAACGACCCCACAGCGCAAGCG
AGTGCAGGCGGCATTCTGCATCGATGTACGTTCTGAAATTTTTCGACGTGCGCTTGAAACCACCACCGATGACATTGAAA
CCATCGGTTTCGCCGGTTTCTTCGGCTTTCCCATCGAGTATGTGCCACTGGCTGAAGTCCACGGCGGTGCCCAGTGTCCG
GTATTGTTGACACCTCAGTTTGTGATCGCGGAAGCAGTGGATGGTGCATCGACAGACGAAGTGGCAAAGATCATAGAGCG
ACGCGCTCTAAGGCAACGGGTTGCCAAGGCATGGCGCATGTTCAAGTTCGCCCCGATCTCCTGTTTCGGCTTCGTTGGCC
CGGTGGGACTGGCGTATCTGCGCAAGCTGGTGCTGGATACGCTCGGCATCACCCGTCCGGTGCCACACCCGGCCCAGTTT
GGTCTCGATGCCCGCACACGCGAGCACGTGGCCCCCATTCTTGAACCGGGCTTGATCGGCGACCGACCTACCGGCATGAC
GCTGGAACAGCGGGTCGCTGCCGCCGCCGGTGCGCTCAAGGCAATGTCGCTGACCGACAACTTCGCCCGCATTGTCTTAC
TGGCCGGCCATGGCTCAACAACGGTCAACAACCCGCACGCCACCGGCCTCGATTGTGGTGCCTGTGGTGGTCATACCGGT
GAAGCGAATGTGCGGGTCGCTGTGCGTATTCTGAACGATCCGGCAGTACGGACCAAACTCAAGGAGCAGGGGATCGTCAT
TCCAGACGACACCGTGTTTGTGGCCGCCCTGCACGACACTACCACCGACGACATCACCATCTTCGATAAGCACATGATCC
CGGCCAGCCATGCCGACGATCTCAAGCGGTTAGAGGCCGACCTGGCTGCCGCCGGTCGCCTGGCACGTGCCGAGCGTGCA
GCCCTGCTCAAGATTGATCGCAAGGCCGACATTGATCGGCAAGTGCGTCAGCGCAGCAAAGACTGGTCGCAGGTACGACC
CGAATGGGGATTGGCCGGCTGTGCAGCATTTATTGCCGCACCACGGGATCGCACTGCCGGGATCAAACTCGATGGCCGTT
CCTTCCTTCACTCGTACACCTGGCAGCAAGACAGCGACTTCAGCGTCCTGGAGCTGATCATGACGGCACCGATGATTGTG
GCCAGTTGGATCAACCTCCAGTACTACGGCTCGACCGTCGATAACCGGTTGTTCGGCAGTGGCAACAAAACGTTACACAA
CGTTGTCGGCACACTCGGCGTACTTGAGGGCAATGCCGGTGACTTACGGGTTGGATTACCCTGGCAGTCAGTGCACGACG
GAGAAAATTATGTCCACGAACCGATGCGGCTCCACGTGCTGATTGAAGCCCCCATCCCGGCGATGACAGCCATCATCGCC
AAACACGAGCAGGTGCGGCAACTGCTCGATAACGGCTGGCTCTACCTGTTTGCCCTTGATGATCGGGGAGTCGTCACCCA
CAAGTACGCCGGCAATCTTCAGTGGGAACCGGTATAG

Upstream 100 bases:

>100_bases
TTTCTACGCTAACACGCTGTTTGACCGCTTCATCGATACGTTTCGCCTGGCCCGTTAATCGTTGAATGGGGATTACTCGC
TTGCAATGGAGGTAATACCA

Downstream 100 bases:

>100_bases
TGCTCTATCCGGCGCACGGTATGCAGCGAGCAATACTACCTCGTAGCCGAAACTGTGCGTCATCACACCAGAACATACCG
CCTGCCTGACTCCACAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 838; Mature: 837

Protein sequence:

>838_residues
MTMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTFADAAQLLARRTDARMTAPRD
FYAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFAFSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAG
AYFDLGQSYWRSPWAQLPAYAAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLT
IHGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELSNEQLTETARYALAGNILLQR
AFEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEIFRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCP
VLLTPQFVIAEAVDGASTDEVAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQF
GLDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGSTTVNNPHATGLDCGACGGHTG
EANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDTTTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERA
ALLKIDRKADIDRQVRQRSKDWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIV
ASWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHEPMRLHVLIEAPIPAMTAIIA
KHEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV

Sequences:

>Translated_838_residues
MTMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTFADAAQLLARRTDARMTAPRD
FYAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFAFSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAG
AYFDLGQSYWRSPWAQLPAYAAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLT
IHGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELSNEQLTETARYALAGNILLQR
AFEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEIFRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCP
VLLTPQFVIAEAVDGASTDEVAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQF
GLDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGSTTVNNPHATGLDCGACGGHTG
EANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDTTTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERA
ALLKIDRKADIDRQVRQRSKDWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIV
ASWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHEPMRLHVLIEAPIPAMTAIIA
KHEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV
>Mature_837_residues
TMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTFADAAQLLARRTDARMTAPRDF
YAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFAFSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAGA
YFDLGQSYWRSPWAQLPAYAAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLTI
HGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELSNEQLTETARYALAGNILLQRA
FEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEIFRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCPV
LLTPQFVIAEAVDGASTDEVAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQFG
LDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGSTTVNNPHATGLDCGACGGHTGE
ANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDTTTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERAA
LLKIDRKADIDRQVRQRSKDWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIVA
SWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHEPMRLHVLIEAPIPAMTAIIAK
HEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV

Specific function: Unknown

COG id: COG3002

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0753 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1777_CHLAA (A9WCK3)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001635383.1
- GeneID:   5826227
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_1777
- HOGENOM:   HBG520117
- OMA:   FAEDWSE
- ProtClustDB:   CLSK2400063
- HAMAP:   MF_01871
- InterPro:   IPR018752

Pfam domain/function: PF10070 DUF2309

EC number: NA

Molecular weight: Translated: 92483; Mature: 92352

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTF
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCHHHHHHHHH
ADAAQLLARRTDARMTAPRDFYAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFA
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
FSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAGAYFDLGQSYWRSPWAQLPAY
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH
AAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IHGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
NEQLTETARYALAGNILLQRAFEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
FRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCPVLLTPQFVIAEAVDGASTDE
HHHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCEEECCHHHHHHHCCCCCHHH
VAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
GLDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGST
CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
TVNNPHATGLDCGACGGHTGEANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDT
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCEECCCCCEEEEEECCC
TTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERAALLKIDRKADIDRQVRQRSK
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCC
DWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIV
CHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ASWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHE
HHHHHHEEECCCCCCCEECCCCHHHHHHHHHHHHEECCCCCEEECCCCHHCCCCHHHHCC
PMRLHVLIEAPIPAMTAIIAKHEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEECCCC
>Mature Secondary Structure 
TMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTF
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCHHHHHHHHH
ADAAQLLARRTDARMTAPRDFYAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFA
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
FSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAGAYFDLGQSYWRSPWAQLPAY
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH
AAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IHGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
NEQLTETARYALAGNILLQRAFEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
FRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCPVLLTPQFVIAEAVDGASTDE
HHHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCEEECCHHHHHHHCCCCCHHH
VAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
GLDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGST
CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
TVNNPHATGLDCGACGGHTGEANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDT
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCEECCCCCEEEEEECCC
TTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERAALLKIDRKADIDRQVRQRSK
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCC
DWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIV
CHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
ASWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHE
HHHHHHEEECCCCCCCEECCCCHHHHHHHHHHHHEECCCCCEEECCCCHHCCCCHHHHCC
PMRLHVLIEAPIPAMTAIIAKHEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA