| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pabA [H]
Identifier: 222525137
GI number: 222525137
Start: 2370418
End: 2370990
Strand: Direct
Name: pabA [H]
Synonym: Chy400_1875
Alternate gene names: 222525137
Gene position: 2370418-2370990 (Clockwise)
Preceding gene: 222525136
Following gene: 222525139
Centisome position: 44.99
GC content: 57.94
Gene sequence:
>573_bases ATGCGCGTTCTCCTGATCGACAACTACGACTCGTTTACATACAATCTGTACCAGTATCTTTGTGAACTGGGCGCTGACGT TGAGGTGGTGCGGAACGACCAGATAACCGTTGCCGATGTCGCATCCCGCGCTCCTGACCGAATCGTGATTAGCCCTGGCC CCTGTACGCCGGCAGAGGCGGGGATCAGTGTTGACGTGATCCGCCAGTTAGGTGGGCACATCCCCATTCTCGGCGTCTGC CTTGGGCATCAGGCCATCGGCGCTGCCTACGGTGGAGCAGTCGTGCGGGCACCACTGGTGATGCACGGCAAACTATCACC CATCTACCATCAGGGTCAGGGCGTGTTTGCCGGCCTTCCCTCGCCATTCCGCGCCACCCGTTACCATTCGTTGATCGTGC GCCGTGAGGATTTGCCCGCTGAACTAGAGGTCACCGCGTGGACGGACGATGGCATCATTATGGGTCTGCGCCATCGCACA TTACCGGTAGAAGGTGTCCAGTTTCACCCTGAGTCGATCATGACCGAGGGTGGAAAACAGATGCTGGCCAATTTTCTAAA TCACGGTCGCTGA
Upstream 100 bases:
>100_bases CATGTGTGGAAGCGCTGATTCGGGCACGGGCGAAAGGGGCTATCCTGACCCAAGATGAACGTGAACAGGCAATTGCATCG CAGACGATGGAGTGATAATT
Downstream 100 bases:
>100_bases TGGGTTGGTTAACGGTCGTTGCATGATCGTGGTGTACGTACTGAGGACTATTGACCGCAGCGGAAAGGGGCGCACAGCCG TGCGCCCCTTTCCTACGCAC
Product: glutamine amidotransferase of anthranilate synthase
Products: NA
Alternate protein names: ADC synthase [H]
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MRVLLIDNYDSFTYNLYQYLCELGADVEVVRNDQITVADVASRAPDRIVISPGPCTPAEAGISVDVIRQLGGHIPILGVC LGHQAIGAAYGGAVVRAPLVMHGKLSPIYHQGQGVFAGLPSPFRATRYHSLIVRREDLPAELEVTAWTDDGIIMGLRHRT LPVEGVQFHPESIMTEGGKQMLANFLNHGR
Sequences:
>Translated_190_residues MRVLLIDNYDSFTYNLYQYLCELGADVEVVRNDQITVADVASRAPDRIVISPGPCTPAEAGISVDVIRQLGGHIPILGVC LGHQAIGAAYGGAVVRAPLVMHGKLSPIYHQGQGVFAGLPSPFRATRYHSLIVRREDLPAELEVTAWTDDGIIMGLRHRT LPVEGVQFHPESIMTEGGKQMLANFLNHGR >Mature_190_residues MRVLLIDNYDSFTYNLYQYLCELGADVEVVRNDQITVADVASRAPDRIVISPGPCTPAEAGISVDVIRQLGGHIPILGVC LGHQAIGAAYGGAVVRAPLVMHGKLSPIYHQGQGVFAGLPSPFRATRYHSLIVRREDLPAELEVTAWTDDGIIMGLRHRT LPVEGVQFHPESIMTEGGKQMLANFLNHGR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=185, Percent_Identity=65.945945945946, Blast_Score=260, Evalue=3e-71, Organism=Escherichia coli, GI1787517, Length=187, Percent_Identity=44.3850267379679, Blast_Score=150, Evalue=4e-38, Organism=Escherichia coli, GI1786215, Length=160, Percent_Identity=30, Blast_Score=67, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322638, Length=186, Percent_Identity=53.2258064516129, Blast_Score=206, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6324361, Length=211, Percent_Identity=33.6492890995261, Blast_Score=91, Evalue=1e-19, Organism=Drosophila melanogaster, GI281365319, Length=144, Percent_Identity=32.6388888888889, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 20695; Mature: 20695
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLIDNYDSFTYNLYQYLCELGADVEVVRNDQITVADVASRAPDRIVISPGPCTPAEA CEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCEEEEHHHCCCCCEEEECCCCCCCCCC GISVDVIRQLGGHIPILGVCLGHQAIGAAYGGAVVRAPLVMHGKLSPIYHQGQGVFAGLP CCCHHHHHHHCCCCCEEEEECCCHHHHHHHCCHHHCCCEEEECCCCCEEECCCEEEECCC SPFRATRYHSLIVRREDLPAELEVTAWTDDGIIMGLRHRTLPVEGVQFHPESIMTEGGKQ CCHHHHHHHEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCEECCHHHHHCCHHH MLANFLNHGR HHHHHHHCCC >Mature Secondary Structure MRVLLIDNYDSFTYNLYQYLCELGADVEVVRNDQITVADVASRAPDRIVISPGPCTPAEA CEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCEEEEHHHCCCCCEEEECCCCCCCCCC GISVDVIRQLGGHIPILGVCLGHQAIGAAYGGAVVRAPLVMHGKLSPIYHQGQGVFAGLP CCCHHHHHHHCCCCCEEEEECCCHHHHHHHCCHHHCCCEEEECCCCCEEECCCEEEECCC SPFRATRYHSLIVRREDLPAELEVTAWTDDGIIMGLRHRTLPVEGVQFHPESIMTEGGKQ CCHHHHHHHEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCCCEECCHHHHHCCHHH MLANFLNHGR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6350604; 2403545; 9278503; 2546924; 8096767 [H]