| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pknL [H]
Identifier: 222525122
GI number: 222525122
Start: 2350058
End: 2351482
Strand: Reverse
Name: pknL [H]
Synonym: Chy400_1860
Alternate gene names: 222525122
Gene position: 2351482-2350058 (Counterclockwise)
Preceding gene: 222525123
Following gene: 222525121
Centisome position: 44.63
GC content: 56.21
Gene sequence:
>1425_bases ATGACCTCACCTGGAACAACAAATCCGCCAGTCATCTTTGGCCGTTATCAGGTCCACGAGGCGCTCGGAGAGACACGCCT CGCGGTGGTGTACAAAGCAACCGATTTGCGGCTTCAGCGACAGGTATTTGTGCATCTGTTACGAAAGTCTCTGCTCGGTA ATGAACAGAAGCGGCAGCAGTTTCTCGCTGAAGCGGCCCAAAGTGCCCGCCGATCCCACCCCGTCTTCCTGGAAGTGTTC GACAGCGGTGAAAGCAATGGTCGCCCCTTCCTGATTACCGAAGCCGCCGAAGGCCGTCCACTGTACGGAATTGGTGCCTT AAGCGTTGCCCAGGCTCTTAGCATTGTGCGCCAGGTGGCCGATGCTATTGCGCTCTGTCAGCGCCAACGTTCAGCCGAAC TCCCGCTGGGATTGTATCATCCCCCCATTAGCAGCGCGAACCTGTTACTTGTCGGTGATAATCAGGTCAAACTCGTCGAG AGCTGGCTCCTTGCACCTGCCCTGGTACCCGCCGATCTGGCCTACTATCGGGCACCCGAATTAAGCACCGGTCAGACAGC CCAGCCGGCAAGTGTGGTCTATGCATTGGGCATCTTACTCTTTGAACTGATTACCGGCCAGCGACCGATCCGCGGTGAGG ATGCCAAAACAACTGCACTGGCCCACCTCACGCAATCGGTTCCTTCGTTGTCACAGGTACGCCCGACAATGCACGTACCT TCACTTGACGATCTTATTGCCCAGGCGACCGCTCGCGAACCAGGGCAACGCTTCGCCGATGCCCAGGTGTTTGGCTCTGC TATCAACAATCTCTGGCATCAGTTGACCGTGCCTACGCGCCGACTCGCTGTGAACCGACCAGAAGTGGCACAGGTTGCAT TGCCGGTACCAGAACGAACAGCAGCGCCGGTCGGCAGTACCAACCCTGCTCGCACACCGGCTCCTTCGCGCTCGCAAGAC CTGCGTGACCGCTTCAGCCAGGCTATAACCGCTGCCTTCGACATTGATCAATTTCGCCGCCAGGATCGGCGGCGTAGCCT GACCGGCTGGCTTATCATGATATTGCTGTTACTCGCCGTTGCCTTTGGATCGTATTGGGCAGTAACCTGGGCCTTTGATC GCTTGAATCTAAGTGCGCCACGCCTGCCGGAATTACCCGCATGGCAGTGGCCCGATCTGAACCTTGCCGACCAAAACACC CAGGAACTATACGTCGTAAATATCAATGAGGGCTTAAATTTACGTTCTGCACCAGATACTCGACCGGAGACAATCATGAT GGTTGTCCCCAACGGCACGGTCGTGCGTAAGCTGGAAGGCCCGGTGATGGCCGATAATATTCCATGGTTAAAAGTGCAGT TTGAACTCAACGGCCAGGTGATTGAAGGCTGGATGTCAATGAACTATCTGCGTCGACAGCAGTAA
Upstream 100 bases:
>100_bases AGTTATCTGCTGATCGACTTGAAAGACTTGTAGTAAGATCAGCAACACTATTGGTAATAGTTAAAACGATACTGTCAGAC ACGAGTGACAGGTCTCGCGC
Downstream 100 bases:
>100_bases GTTCCAGCAGCGTTGAAGCGTAGTTTAATCGTGGTATGATAGGAGGCGGTGTGGAGCAGGAAGCGGAGAAGCGCGAATTG CTCGGTGAACGGGTAAAAAT
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MTSPGTTNPPVIFGRYQVHEALGETRLAVVYKATDLRLQRQVFVHLLRKSLLGNEQKRQQFLAEAAQSARRSHPVFLEVF DSGESNGRPFLITEAAEGRPLYGIGALSVAQALSIVRQVADAIALCQRQRSAELPLGLYHPPISSANLLLVGDNQVKLVE SWLLAPALVPADLAYYRAPELSTGQTAQPASVVYALGILLFELITGQRPIRGEDAKTTALAHLTQSVPSLSQVRPTMHVP SLDDLIAQATAREPGQRFADAQVFGSAINNLWHQLTVPTRRLAVNRPEVAQVALPVPERTAAPVGSTNPARTPAPSRSQD LRDRFSQAITAAFDIDQFRRQDRRRSLTGWLIMILLLLAVAFGSYWAVTWAFDRLNLSAPRLPELPAWQWPDLNLADQNT QELYVVNINEGLNLRSAPDTRPETIMMVVPNGTVVRKLEGPVMADNIPWLKVQFELNGQVIEGWMSMNYLRRQQ
Sequences:
>Translated_474_residues MTSPGTTNPPVIFGRYQVHEALGETRLAVVYKATDLRLQRQVFVHLLRKSLLGNEQKRQQFLAEAAQSARRSHPVFLEVF DSGESNGRPFLITEAAEGRPLYGIGALSVAQALSIVRQVADAIALCQRQRSAELPLGLYHPPISSANLLLVGDNQVKLVE SWLLAPALVPADLAYYRAPELSTGQTAQPASVVYALGILLFELITGQRPIRGEDAKTTALAHLTQSVPSLSQVRPTMHVP SLDDLIAQATAREPGQRFADAQVFGSAINNLWHQLTVPTRRLAVNRPEVAQVALPVPERTAAPVGSTNPARTPAPSRSQD LRDRFSQAITAAFDIDQFRRQDRRRSLTGWLIMILLLLAVAFGSYWAVTWAFDRLNLSAPRLPELPAWQWPDLNLADQNT QELYVVNINEGLNLRSAPDTRPETIMMVVPNGTVVRKLEGPVMADNIPWLKVQFELNGQVIEGWMSMNYLRRQQ >Mature_473_residues TSPGTTNPPVIFGRYQVHEALGETRLAVVYKATDLRLQRQVFVHLLRKSLLGNEQKRQQFLAEAAQSARRSHPVFLEVFD SGESNGRPFLITEAAEGRPLYGIGALSVAQALSIVRQVADAIALCQRQRSAELPLGLYHPPISSANLLLVGDNQVKLVES WLLAPALVPADLAYYRAPELSTGQTAQPASVVYALGILLFELITGQRPIRGEDAKTTALAHLTQSVPSLSQVRPTMHVPS LDDLIAQATAREPGQRFADAQVFGSAINNLWHQLTVPTRRLAVNRPEVAQVALPVPERTAAPVGSTNPARTPAPSRSQDL RDRFSQAITAAFDIDQFRRQDRRRSLTGWLIMILLLLAVAFGSYWAVTWAFDRLNLSAPRLPELPAWQWPDLNLADQNTQ ELYVVNINEGLNLRSAPDTRPETIMMVVPNGTVVRKLEGPVMADNIPWLKVQFELNGQVIEGWMSMNYLRRQQ
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI193083127, Length=215, Percent_Identity=25.5813953488372, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI46852166, Length=215, Percent_Identity=25.5813953488372, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI193083129, Length=215, Percent_Identity=25.5813953488372, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI193083125, Length=215, Percent_Identity=25.5813953488372, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI153791472, Length=215, Percent_Identity=25.1162790697674, Blast_Score=69, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319825, Length=274, Percent_Identity=25.5474452554745, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI161077232, Length=271, Percent_Identity=23.9852398523985, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI161077230, Length=271, Percent_Identity=23.9852398523985, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24655167, Length=271, Percent_Identity=23.9852398523985, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR008271 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 52554; Mature: 52423
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPGTTNPPVIFGRYQVHEALGETRLAVVYKATDLRLQRQVFVHLLRKSLLGNEQKRQQ CCCCCCCCCCEEEEHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHH FLAEAAQSARRSHPVFLEVFDSGESNGRPFLITEAAEGRPLYGIGALSVAQALSIVRQVA HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHH DAIALCQRQRSAELPLGLYHPPISSANLLLVGDNQVKLVESWLLAPALVPADLAYYRAPE HHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC LSTGQTAQPASVVYALGILLFELITGQRPIRGEDAKTTALAHLTQSVPSLSQVRPTMHVP CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCC SLDDLIAQATAREPGQRFADAQVFGSAINNLWHQLTVPTRRLAVNRPEVAQVALPVPERT CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCC AAPVGSTNPARTPAPSRSQDLRDRFSQAITAAFDIDQFRRQDRRRSLTGWLIMILLLLAV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGSYWAVTWAFDRLNLSAPRLPELPAWQWPDLNLADQNTQELYVVNINEGLNLRSAPDT HHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC RPETIMMVVPNGTVVRKLEGPVMADNIPWLKVQFELNGQVIEGWMSMNYLRRQQ CCCEEEEECCCCCEEEEECCCEEECCCCEEEEEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure TSPGTTNPPVIFGRYQVHEALGETRLAVVYKATDLRLQRQVFVHLLRKSLLGNEQKRQQ CCCCCCCCCEEEEHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHH FLAEAAQSARRSHPVFLEVFDSGESNGRPFLITEAAEGRPLYGIGALSVAQALSIVRQVA HHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHH DAIALCQRQRSAELPLGLYHPPISSANLLLVGDNQVKLVESWLLAPALVPADLAYYRAPE HHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC LSTGQTAQPASVVYALGILLFELITGQRPIRGEDAKTTALAHLTQSVPSLSQVRPTMHVP CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCC SLDDLIAQATAREPGQRFADAQVFGSAINNLWHQLTVPTRRLAVNRPEVAQVALPVPERT CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCC AAPVGSTNPARTPAPSRSQDLRDRFSQAITAAFDIDQFRRQDRRRSLTGWLIMILLLLAV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGSYWAVTWAFDRLNLSAPRLPELPAWQWPDLNLADQNTQELYVVNINEGLNLRSAPDT HHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC RPETIMMVVPNGTVVRKLEGPVMADNIPWLKVQFELNGQVIEGWMSMNYLRRQQ CCCEEEEECCCCCEEEEECCCEEECCCCEEEEEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]