| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525092
Identifier: 222525092
GI number: 222525092
Start: 2316703
End: 2318241
Strand: Reverse
Name: 222525092
Synonym: Chy400_1830
Alternate gene names: NA
Gene position: 2318241-2316703 (Counterclockwise)
Preceding gene: 222525093
Following gene: 222525091
Centisome position: 44.0
GC content: 56.79
Gene sequence:
>1539_bases ATGCGCCCGGCAACGATCTCTCGTTATTCTCTGCTCGGCCTGATCATAAGTTTTCTTATGTTTAGTGCCGGCTGTACCTG GGCACCGGCAGCAACATCCTCACCAACCGCTCAACCAATCACTGCCACTGCTACACCAGATCGCCAACCCACACCAGAAC CGCCACGCCCAACGGTAGCGCCGATGATCGGTCTTGCCAACCCGGCGGCGAGATACTGCATTGAACAGGGTGGGCAGGTA GAGATACAGACCACTGCTGATGGTGCGCAACTGGGCTTATGTGTGTTCAATGACGGAACGGTATGCGAAGAGTGGGCCTT TCTACGCGGTGAATGCGCACCGGGCCAGCAGTACCAAATCGACTCAAATGCCGTCAGCGATACAACGACTCTCGATCCGG TTGTGCGCGAGCTGTTTGCCCTGGTGAAGGCCGAACTACCACCACAGGCGTTTGATTCGTTTGCCGCCCAACCGTTGCCT TCCACCCCTGAGCGGCAATTGTGGGCGGTGTACAGCACCGGCATGCGCAACTTCGATCTCGATCCGCCAGTACCGCATTT TATTGCGGTGTACGCCTACACCAACGAGCACTGGCAACTTCTTAGTCGGCAGAACCTGGTGTCAGTATCAGAAGAGGACG GATCCTCTCTCGAACCAGACTTTATCGGGGCTGTTCGCCAGGTCAAGATTAGCCCAGATCGCATCTGGTTGCAGGTCGAA GGGGGGCTGGGTGCGCACAGCGGTAGTTATCACCTGTTCAGTTTTGCCGCTGATACCCTGCGCCTGGAGCTTGCCGCCTA TGCATCGAGTCCTGGGGTGGGTTCCATCGCAGACCTGGATGGCGATGGAATTGCCGAGGTGGTTCTTGATCGGTCGGAGC GCTACATCTTCTGCTATGCCTGTGGCGTCTACTATCCTTTTTATCAGGTCTACGCCTGGGAAAACGGCTCGATGGTTGAA CGCACGATAAGCGAGCTGGTGCCCCAATATCAAACCGCGCCGTATGCCGAACAGAACGGCCAGGCCGTCACATTTGCGCA GACCGATTTGTGGGCAGAGGCTTTAACCGCGATCAACGCAGCAGTCGCCGCTGCCGGCAGTGCCGATCCGCCCACGACCG GCGGATCACTCCGCTGGAATCAGCGCCTGATCCAGAAGATGCACGATGCTCATCTGGAGGCGATTGTGAACAGCGCCTTC CCCTTGCTGAACCGCGTGTTTTACGGCGATTATAACGGTGTCGTTGATCAGATGCGACAAACCGCACCGGCTGAGATTTT CAGTACCAAATCGCCGCTCATCGTGGGGACGGTAGCAGAGGGCTGGGAAACTACGTTGGGTGAGCATTTGATCTCGGCAA CTGAACGAGTACTGGCAATCCAACCGGATCGCGCAGAGGTTTTCTTCGTCCAGGCATGGGGCAGATTTTTGGTTGATGCA ACTGATCCCGCGATTGCAACTGATCTCGACCGCGCTGCGCAGTTGCAGCCCGATACGCCGTTGTTTGTAGAGAGTGCAAC CTGGTGGAAGAATCGGTAG
Upstream 100 bases:
>100_bases CGCTGCGGCCTAACGACGAGTTCTATACGATGGGCCGGTGAGGGAACCATATTCTCTGATCTTCATTTTCCGGGCCACAC CCCGGTAGAGATGGATTATT
Downstream 100 bases:
>100_bases CGGCGATCACATCAGTCAGCGGAATCATCGTAGGCTGGAGTCATTACCCTGCGAAAATCTCTGATTCATAGTTCGTTTGT TCTACCAAAGAGTGGTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVAPMIGLANPAARYCIEQGGQV EIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQIDSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLP STPERQLWAVYSTGMRNFDLDPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYACGVYYPFYQVYAWENGSMVE RTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINAAVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAF PLLNRVFYGDYNGVVDQMRQTAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA TDPAIATDLDRAAQLQPDTPLFVESATWWKNR
Sequences:
>Translated_512_residues MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVAPMIGLANPAARYCIEQGGQV EIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQIDSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLP STPERQLWAVYSTGMRNFDLDPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYACGVYYPFYQVYAWENGSMVE RTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINAAVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAF PLLNRVFYGDYNGVVDQMRQTAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA TDPAIATDLDRAAQLQPDTPLFVESATWWKNR >Mature_512_residues MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVAPMIGLANPAARYCIEQGGQV EIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQIDSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLP STPERQLWAVYSTGMRNFDLDPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYACGVYYPFYQVYAWENGSMVE RTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINAAVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAF PLLNRVFYGDYNGVVDQMRQTAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA TDPAIATDLDRAAQLQPDTPLFVESATWWKNR
Specific function: Unknown
COG id: COG3042
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55871; Mature: 55871
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHH PMIGLANPAARYCIEQGGQVEIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQI HHHCCCCHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCEEE DSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLPSTPERQLWAVYSTGMRNFDL CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHEEEEECCCCCCCCC DPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE CCCCCCEEEEEEEECHHHHHHHHCCCEEECCCCCCCCCCHHHHHEEEEEECCCEEEEEEC GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYA CCCCCCCCCEEEEEEHHHHHEEEEEECCCCCCCCCEECCCCCCHHHHHCCCCCCEEEEEE CGVYYPFYQVYAWENGSMVERTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINA ECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH AVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAFPLLNRVFYGDYNGVVDQMRQ HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA CCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEEEC TDPAIATDLDRAAQLQPDTPLFVESATWWKNR CCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHH PMIGLANPAARYCIEQGGQVEIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQI HHHCCCCHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCEEE DSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLPSTPERQLWAVYSTGMRNFDL CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHEEEEECCCCCCCCC DPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE CCCCCCEEEEEEEECHHHHHHHHCCCEEECCCCCCCCCCHHHHHEEEEEECCCEEEEEEC GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYA CCCCCCCCCEEEEEEHHHHHEEEEEECCCCCCCCCEECCCCCCHHHHHCCCCCCEEEEEE CGVYYPFYQVYAWENGSMVERTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINA ECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH AVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAFPLLNRVFYGDYNGVVDQMRQ HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA CCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEEEC TDPAIATDLDRAAQLQPDTPLFVESATWWKNR CCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA