Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525092

Identifier: 222525092

GI number: 222525092

Start: 2316703

End: 2318241

Strand: Reverse

Name: 222525092

Synonym: Chy400_1830

Alternate gene names: NA

Gene position: 2318241-2316703 (Counterclockwise)

Preceding gene: 222525093

Following gene: 222525091

Centisome position: 44.0

GC content: 56.79

Gene sequence:

>1539_bases
ATGCGCCCGGCAACGATCTCTCGTTATTCTCTGCTCGGCCTGATCATAAGTTTTCTTATGTTTAGTGCCGGCTGTACCTG
GGCACCGGCAGCAACATCCTCACCAACCGCTCAACCAATCACTGCCACTGCTACACCAGATCGCCAACCCACACCAGAAC
CGCCACGCCCAACGGTAGCGCCGATGATCGGTCTTGCCAACCCGGCGGCGAGATACTGCATTGAACAGGGTGGGCAGGTA
GAGATACAGACCACTGCTGATGGTGCGCAACTGGGCTTATGTGTGTTCAATGACGGAACGGTATGCGAAGAGTGGGCCTT
TCTACGCGGTGAATGCGCACCGGGCCAGCAGTACCAAATCGACTCAAATGCCGTCAGCGATACAACGACTCTCGATCCGG
TTGTGCGCGAGCTGTTTGCCCTGGTGAAGGCCGAACTACCACCACAGGCGTTTGATTCGTTTGCCGCCCAACCGTTGCCT
TCCACCCCTGAGCGGCAATTGTGGGCGGTGTACAGCACCGGCATGCGCAACTTCGATCTCGATCCGCCAGTACCGCATTT
TATTGCGGTGTACGCCTACACCAACGAGCACTGGCAACTTCTTAGTCGGCAGAACCTGGTGTCAGTATCAGAAGAGGACG
GATCCTCTCTCGAACCAGACTTTATCGGGGCTGTTCGCCAGGTCAAGATTAGCCCAGATCGCATCTGGTTGCAGGTCGAA
GGGGGGCTGGGTGCGCACAGCGGTAGTTATCACCTGTTCAGTTTTGCCGCTGATACCCTGCGCCTGGAGCTTGCCGCCTA
TGCATCGAGTCCTGGGGTGGGTTCCATCGCAGACCTGGATGGCGATGGAATTGCCGAGGTGGTTCTTGATCGGTCGGAGC
GCTACATCTTCTGCTATGCCTGTGGCGTCTACTATCCTTTTTATCAGGTCTACGCCTGGGAAAACGGCTCGATGGTTGAA
CGCACGATAAGCGAGCTGGTGCCCCAATATCAAACCGCGCCGTATGCCGAACAGAACGGCCAGGCCGTCACATTTGCGCA
GACCGATTTGTGGGCAGAGGCTTTAACCGCGATCAACGCAGCAGTCGCCGCTGCCGGCAGTGCCGATCCGCCCACGACCG
GCGGATCACTCCGCTGGAATCAGCGCCTGATCCAGAAGATGCACGATGCTCATCTGGAGGCGATTGTGAACAGCGCCTTC
CCCTTGCTGAACCGCGTGTTTTACGGCGATTATAACGGTGTCGTTGATCAGATGCGACAAACCGCACCGGCTGAGATTTT
CAGTACCAAATCGCCGCTCATCGTGGGGACGGTAGCAGAGGGCTGGGAAACTACGTTGGGTGAGCATTTGATCTCGGCAA
CTGAACGAGTACTGGCAATCCAACCGGATCGCGCAGAGGTTTTCTTCGTCCAGGCATGGGGCAGATTTTTGGTTGATGCA
ACTGATCCCGCGATTGCAACTGATCTCGACCGCGCTGCGCAGTTGCAGCCCGATACGCCGTTGTTTGTAGAGAGTGCAAC
CTGGTGGAAGAATCGGTAG

Upstream 100 bases:

>100_bases
CGCTGCGGCCTAACGACGAGTTCTATACGATGGGCCGGTGAGGGAACCATATTCTCTGATCTTCATTTTCCGGGCCACAC
CCCGGTAGAGATGGATTATT

Downstream 100 bases:

>100_bases
CGGCGATCACATCAGTCAGCGGAATCATCGTAGGCTGGAGTCATTACCCTGCGAAAATCTCTGATTCATAGTTCGTTTGT
TCTACCAAAGAGTGGTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVAPMIGLANPAARYCIEQGGQV
EIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQIDSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLP
STPERQLWAVYSTGMRNFDLDPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE
GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYACGVYYPFYQVYAWENGSMVE
RTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINAAVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAF
PLLNRVFYGDYNGVVDQMRQTAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA
TDPAIATDLDRAAQLQPDTPLFVESATWWKNR

Sequences:

>Translated_512_residues
MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVAPMIGLANPAARYCIEQGGQV
EIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQIDSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLP
STPERQLWAVYSTGMRNFDLDPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE
GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYACGVYYPFYQVYAWENGSMVE
RTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINAAVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAF
PLLNRVFYGDYNGVVDQMRQTAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA
TDPAIATDLDRAAQLQPDTPLFVESATWWKNR
>Mature_512_residues
MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVAPMIGLANPAARYCIEQGGQV
EIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQIDSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLP
STPERQLWAVYSTGMRNFDLDPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE
GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYACGVYYPFYQVYAWENGSMVE
RTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINAAVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAF
PLLNRVFYGDYNGVVDQMRQTAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA
TDPAIATDLDRAAQLQPDTPLFVESATWWKNR

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55871; Mature: 55871

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHH
PMIGLANPAARYCIEQGGQVEIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQI
HHHCCCCHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCEEE
DSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLPSTPERQLWAVYSTGMRNFDL
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHEEEEECCCCCCCCC
DPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE
CCCCCCEEEEEEEECHHHHHHHHCCCEEECCCCCCCCCCHHHHHEEEEEECCCEEEEEEC
GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYA
CCCCCCCCCEEEEEEHHHHHEEEEEECCCCCCCCCEECCCCCCHHHHHCCCCCCEEEEEE
CGVYYPFYQVYAWENGSMVERTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINA
ECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
AVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAFPLLNRVFYGDYNGVVDQMRQ
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA
CCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEEEC
TDPAIATDLDRAAQLQPDTPLFVESATWWKNR
CCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MRPATISRYSLLGLIISFLMFSAGCTWAPAATSSPTAQPITATATPDRQPTPEPPRPTVA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHH
PMIGLANPAARYCIEQGGQVEIQTTADGAQLGLCVFNDGTVCEEWAFLRGECAPGQQYQI
HHHCCCCHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCEEE
DSNAVSDTTTLDPVVRELFALVKAELPPQAFDSFAAQPLPSTPERQLWAVYSTGMRNFDL
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHEEEEECCCCCCCCC
DPPVPHFIAVYAYTNEHWQLLSRQNLVSVSEEDGSSLEPDFIGAVRQVKISPDRIWLQVE
CCCCCCEEEEEEEECHHHHHHHHCCCEEECCCCCCCCCCHHHHHEEEEEECCCEEEEEEC
GGLGAHSGSYHLFSFAADTLRLELAAYASSPGVGSIADLDGDGIAEVVLDRSERYIFCYA
CCCCCCCCCEEEEEEHHHHHEEEEEECCCCCCCCCEECCCCCCHHHHHCCCCCCEEEEEE
CGVYYPFYQVYAWENGSMVERTISELVPQYQTAPYAEQNGQAVTFAQTDLWAEALTAINA
ECCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHH
AVAAAGSADPPTTGGSLRWNQRLIQKMHDAHLEAIVNSAFPLLNRVFYGDYNGVVDQMRQ
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
TAPAEIFSTKSPLIVGTVAEGWETTLGEHLISATERVLAIQPDRAEVFFVQAWGRFLVDA
CCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEEEC
TDPAIATDLDRAAQLQPDTPLFVESATWWKNR
CCCHHHHHHHHHHCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA