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The map label for this gene is accD

Identifier: 222525051

GI number: 222525051

Start: 2255722

End: 2256639

Strand: Reverse

Name: accD

Synonym: Chy400_1787

Alternate gene names: 222525051

Gene position: 2256639-2255722 (Counterclockwise)

Preceding gene: 222525052

Following gene: 222525050

Centisome position: 42.83

GC content: 55.99

Gene sequence:

>918_bases
GTGAAAGAATTCTTCCGCCTAAGTCGAAAAGGGTTTACCGGGCGTGAGGATCAAGACAGCGCCCAAATCCCCGATGATCT
GTGGGTGAAGTGCAGTTCCTGTCGTGAGCTTATCTACAAAAAACAGCTCAACGATAACCTGAAGGTCTGCCCCAAATGCG
GTCATCACATGCGCCTGAGTGCCCACGAGTGGCTCGGTCTCCTCGATGTCGGTTCGTTCCGCGAAATGGATGCCAATCTA
TTGCCGACCGATCCCCTGGGTTTCGTCACCGACGAGGAGAGTTACGCAGCCAAGCTGGCGAAAACTCAACAACGCACCGG
CATGGCCGATGCAGTGATTGCCGGCATTGGTGCCATCAGCAACATGCAGATCTGCGTCGCAGTGGCTGATTTCTCCTTCA
TGGGCGCTTCAATGGGCAGTGTCTACGGCGAAAAAATGGCCCGCTCCGCCGAACGGGCTGCTGAACTGGGTGTCCCTCTG
CTCACCATCAATACATCCGGTGGTGCTCGTCAGCAAGAGGGGGTGATCGGGCTGATGCAGATGGCTAAGGTAACAATGGC
TCTCACCCGGTTGGCGGATGCCGGTCAACCCCATATTGCGTTGCTGGTTGATCCCTGTTACGGCGGTGTGACGGCTTCGT
ATCCTTCGGTGGCCGATATTATCATCGCCGAACCGGGAGCCAACATTGGTTTTGCCGGCAAGCGTTTAATCGAGCAGATC
ATGCGCCAGAAGTTACCAGCCGGCTTCCAGACCGCCGAGTTTATGCTCGAACATGGCATGATCGATATGGTGGTGCCGCG
AAGCGAGATGCGTGACACACTGGCCCGTATTCTGCGTCTCTACCGCCAGCGCTCAACATCACCCGCTAAAGCTGAGCTTG
CCGGTCGACGAGCAACGTTACCGCAACCGATTATGTAA

Upstream 100 bases:

>100_bases
CCCCTTTGCGGCTCATGCTATAATAGATAACAATGAACTCACTGTGAATAAAATCACCAGCAGACGCGCATATACGCGCC
AAGTGAAAGCGCAGGGAACC

Downstream 100 bases:

>100_bases
CTGCGTGTGAGGCATACAATGGAAGAAACTGCTATCCCTCAATCGCTGACGCCCTGGGATCGCGTACAACTGGCTCGCCA
TCCACAACGGCCACACACGC

Product: acetyl-CoA carboxylase, carboxyl transferase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKEFFRLSRKGFTGREDQDSAQIPDDLWVKCSSCRELIYKKQLNDNLKVCPKCGHHMRLSAHEWLGLLDVGSFREMDANL
LPTDPLGFVTDEESYAAKLAKTQQRTGMADAVIAGIGAISNMQICVAVADFSFMGASMGSVYGEKMARSAERAAELGVPL
LTINTSGGARQQEGVIGLMQMAKVTMALTRLADAGQPHIALLVDPCYGGVTASYPSVADIIIAEPGANIGFAGKRLIEQI
MRQKLPAGFQTAEFMLEHGMIDMVVPRSEMRDTLARILRLYRQRSTSPAKAELAGRRATLPQPIM

Sequences:

>Translated_305_residues
MKEFFRLSRKGFTGREDQDSAQIPDDLWVKCSSCRELIYKKQLNDNLKVCPKCGHHMRLSAHEWLGLLDVGSFREMDANL
LPTDPLGFVTDEESYAAKLAKTQQRTGMADAVIAGIGAISNMQICVAVADFSFMGASMGSVYGEKMARSAERAAELGVPL
LTINTSGGARQQEGVIGLMQMAKVTMALTRLADAGQPHIALLVDPCYGGVTASYPSVADIIIAEPGANIGFAGKRLIEQI
MRQKLPAGFQTAEFMLEHGMIDMVVPRSEMRDTLARILRLYRQRSTSPAKAELAGRRATLPQPIM
>Mature_305_residues
MKEFFRLSRKGFTGREDQDSAQIPDDLWVKCSSCRELIYKKQLNDNLKVCPKCGHHMRLSAHEWLGLLDVGSFREMDANL
LPTDPLGFVTDEESYAAKLAKTQQRTGMADAVIAGIGAISNMQICVAVADFSFMGASMGSVYGEKMARSAERAAELGVPL
LTINTSGGARQQEGVIGLMQMAKVTMALTRLADAGQPHIALLVDPCYGGVTASYPSVADIIIAEPGANIGFAGKRLIEQI
MRQKLPAGFQTAEFMLEHGMIDMVVPRSEMRDTLARILRLYRQRSTSPAKAELAGRRATLPQPIM

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Homo sapiens, GI119943100, Length=164, Percent_Identity=31.7073170731707, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1788655, Length=259, Percent_Identity=48.6486486486487, Blast_Score=254, Evalue=6e-69,
Organism=Caenorhabditis elegans, GI25147362, Length=166, Percent_Identity=31.3253012048193, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25147359, Length=166, Percent_Identity=31.3253012048193, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_CHLAA (A9WBQ9)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001635255.1
- ProteinModelPortal:   A9WBQ9
- SMR:   A9WBQ9
- GeneID:   5826094
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_1648
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- ProtClustDB:   CLSK972927
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 33312; Mature: 33312

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFFRLSRKGFTGREDQDSAQIPDDLWVKCSSCRELIYKKQLNDNLKVCPKCGHHMRLS
CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEC
AHEWLGLLDVGSFREMDANLLPTDPLGFVTDEESYAAKLAKTQQRTGMADAVIAGIGAIS
HHHHHHHHCCCCHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHCCCC
NMQICVAVADFSFMGASMGSVYGEKMARSAERAAELGVPLLTINTSGGARQQEGVIGLMQ
CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
MAKVTMALTRLADAGQPHIALLVDPCYGGVTASYPSVADIIIAEPGANIGFAGKRLIEQI
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
MRQKLPAGFQTAEFMLEHGMIDMVVPRSEMRDTLARILRLYRQRSTSPAKAELAGRRATL
HHHHCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
PQPIM
CCCCC
>Mature Secondary Structure
MKEFFRLSRKGFTGREDQDSAQIPDDLWVKCSSCRELIYKKQLNDNLKVCPKCGHHMRLS
CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEC
AHEWLGLLDVGSFREMDANLLPTDPLGFVTDEESYAAKLAKTQQRTGMADAVIAGIGAIS
HHHHHHHHCCCCHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHCCCC
NMQICVAVADFSFMGASMGSVYGEKMARSAERAAELGVPLLTINTSGGARQQEGVIGLMQ
CCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
MAKVTMALTRLADAGQPHIALLVDPCYGGVTASYPSVADIIIAEPGANIGFAGKRLIEQI
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
MRQKLPAGFQTAEFMLEHGMIDMVVPRSEMRDTLARILRLYRQRSTSPAKAELAGRRATL
HHHHCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
PQPIM
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA