| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ybbP [H]
Identifier: 222524978
GI number: 222524978
Start: 2159457
End: 2160287
Strand: Reverse
Name: ybbP [H]
Synonym: Chy400_1713
Alternate gene names: 222524978
Gene position: 2160287-2159457 (Counterclockwise)
Preceding gene: 222524979
Following gene: 222524977
Centisome position: 41.0
GC content: 55.84
Gene sequence:
>831_bases ATGATAGAGCTTGAGCGTCTCTGGACGCGGTTAAATCCGCTTACCTCACCATTCGCGCTGATCGACATTTTCATTGTTAC AGCCTTCTTTTACTGGCTGTTGGGCATTGTGCGTGGCACGCGCGCTGTCCAGTTGCTGCGCGGGGTTGGTATTTTGCTGG CTATCGCTTTTCTGATGCCTGCTATCGCCAGTGATCGGCTTACGCTCCTCACCTGGTTGATTGTGAATGTCATCTCGCCG GCATTGATCGTGGCTATTCCCGTCCTTTTCCAGCCGGAGTTGCGACGGGCGCTAGAGAGCCTTGGTCGGTCGAGTGACCT CTTCGGGCGACCGTTTGGTGGTGCCAATCGCTCTGAGCTGTTGGAGACGATTACGGTGATCAGTCGCGCAGCAGCACAGC TCTCGCAGCAGGGGGTTGGGGCACTGATTGTGATTGAACGCCGCACCCAGTTGCAGGAATTTGCCGACCGTGGTGTGATT CTCGACTCGCGTATTTCCACGCCGCTTTTGCTCAATATTTTCTTTCCTAACTCACCCTTGCACGATATGGCAGTGATCAT TCGCGGGAATCGGATTCTGGCAGCCAATGTTGTGCTACCGCTTAGCGAAGATATTTCCGGTCCACGACGGTACGGTACGC GCCACCGTGCGGCCAAGGGGATTACCGAGCAGACTGATGCACTGGCCGTCGTTGTGTCAGAAGAGACCGGTGCTATCTCG CTCGTCAGTGATGGCCGCATGGTGAGCTATTTAACCGAGACACGGCTGCGGACAATGCTGGCCGATCTGATGCAGGTGCC GCTTGAGAAAGAAGCGAAGAGGGCGGCATGA
Upstream 100 bases:
>100_bases TGAAGATGCCGGGAATCGAAACAGAACGGGTAGAAGCTATGTTAAGTGCCGCCAATCGTATGCTAGAGCAACGTAAGTCG GCGCCGCCACAGAGTTAACA
Downstream 100 bases:
>100_bases ATGGCGTGCGTTCAATCGTGTTGCGGGCGTTCCTGGCCTTTGGTCTGAGCTTTGCCCTCTGGTCGTTTGTTTCTTTCAGC GAGAATCCTGAAGAGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MIELERLWTRLNPLTSPFALIDIFIVTAFFYWLLGIVRGTRAVQLLRGVGILLAIAFLMPAIASDRLTLLTWLIVNVISP ALIVAIPVLFQPELRRALESLGRSSDLFGRPFGGANRSELLETITVISRAAAQLSQQGVGALIVIERRTQLQEFADRGVI LDSRISTPLLLNIFFPNSPLHDMAVIIRGNRILAANVVLPLSEDISGPRRYGTRHRAAKGITEQTDALAVVVSEETGAIS LVSDGRMVSYLTETRLRTMLADLMQVPLEKEAKRAA
Sequences:
>Translated_276_residues MIELERLWTRLNPLTSPFALIDIFIVTAFFYWLLGIVRGTRAVQLLRGVGILLAIAFLMPAIASDRLTLLTWLIVNVISP ALIVAIPVLFQPELRRALESLGRSSDLFGRPFGGANRSELLETITVISRAAAQLSQQGVGALIVIERRTQLQEFADRGVI LDSRISTPLLLNIFFPNSPLHDMAVIIRGNRILAANVVLPLSEDISGPRRYGTRHRAAKGITEQTDALAVVVSEETGAIS LVSDGRMVSYLTETRLRTMLADLMQVPLEKEAKRAA >Mature_276_residues MIELERLWTRLNPLTSPFALIDIFIVTAFFYWLLGIVRGTRAVQLLRGVGILLAIAFLMPAIASDRLTLLTWLIVNVISP ALIVAIPVLFQPELRRALESLGRSSDLFGRPFGGANRSELLETITVISRAAAQLSQQGVGALIVIERRTQLQEFADRGVI LDSRISTPLLLNIFFPNSPLHDMAVIIRGNRILAANVVLPLSEDISGPRRYGTRHRAAKGITEQTDALAVVVSEETGAIS LVSDGRMVSYLTETRLRTMLADLMQVPLEKEAKRAA
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 30404; Mature: 30404
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELERLWTRLNPLTSPFALIDIFIVTAFFYWLLGIVRGTRAVQLLRGVGILLAIAFLMP CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIASDRLTLLTWLIVNVISPALIVAIPVLFQPELRRALESLGRSSDLFGRPFGGANRSEL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH LETITVISRAAAQLSQQGVGALIVIERRTQLQEFADRGVILDSRISTPLLLNIFFPNSPL HHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCH HDMAVIIRGNRILAANVVLPLSEDISGPRRYGTRHRAAKGITEQTDALAVVVSEETGAIS HHEEEEEECCEEEEEEEEEECHHCCCCHHHHCHHHHHHCCCCCCCCEEEEEEECCCCEEE LVSDGRMVSYLTETRLRTMLADLMQVPLEKEAKRAA EECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MIELERLWTRLNPLTSPFALIDIFIVTAFFYWLLGIVRGTRAVQLLRGVGILLAIAFLMP CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIASDRLTLLTWLIVNVISPALIVAIPVLFQPELRRALESLGRSSDLFGRPFGGANRSEL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH LETITVISRAAAQLSQQGVGALIVIERRTQLQEFADRGVILDSRISTPLLLNIFFPNSPL HHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCH HDMAVIIRGNRILAANVVLPLSEDISGPRRYGTRHRAAKGITEQTDALAVVVSEETGAIS HHEEEEEECCEEEEEEEEEECHHCCCCHHHHCHHHHHHCCCCCCCCEEEEEEECCCCEEE LVSDGRMVSYLTETRLRTMLADLMQVPLEKEAKRAA EECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]