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The map label for this gene is ywtF [H]

Identifier: 222524949

GI number: 222524949

Start: 2126943

End: 2128322

Strand: Reverse

Name: ywtF [H]

Synonym: Chy400_1684

Alternate gene names: 222524949

Gene position: 2128322-2126943 (Counterclockwise)

Preceding gene: 222524952

Following gene: 222524946

Centisome position: 40.39

GC content: 57.68

Gene sequence:

>1380_bases
ATGACATGCAGTGAAGCACGTGCGCTCCTGGCAGCCGGTATTCGTCCCGGCACTGCTTCGAGCACCCGATTACGCTTGAA
AGCTCACCTTGATCATTGTTCTGCCTGTCGTACTCTGCATGATCAGACTGACCACGATCTCTTACTAAACTTACTGACTC
AACCGGTTGTTTCTGAGCAATCACCATCGCAACGCCCCTGGTTACGGTATGTGCTGATTGCACTCCTGGCACTCTTCGCC
GGCTGGTTAGGCTTCCAGACCGGCCGGGTGGTTTGGGCAGCGATGACTATCCGGCAGAATCTGGAAGCGATGCGGTTGCC
GACAGTGGTAGCCACACCGACGCCGGCGATGTCGGTGGTAGCATTTACCCCTCTCTCATCACCACAGCCGTTGAATGTTA
TCCAACCGACGTCAGTCGTTCCGACCGCAGTGTCGGCTGCCATTACGCCGGCGATCACACCAACATCCATTGTGCGTGAC
GTAACTATTGCTGCTTCAGCAACGCCGATCCGCTTGCCGGGGATTGATGGGCGGATGCCGGTGCCGACCTTGATGCCAAC
AGTGGGGGTCAATCTGCCATCGAGTGACGTGATCCATATCCTGCTGTTGGGGAGTGATCGGCGTCCCGGTGAAGGATGGG
CAACCCGTGCCGATGCCATCATGGTGGTACGGATCGAGATGGCGACGCGCCGGGTGGCTTTGCTCTCGTTGCCGCGCGAT
CTGATCGTTGCGATTCCCGGCTACGGGTACGGGCGGATCAACAGTGCCACCGTGTACGGCGAGCAAAATCCGGCCATTGG
CGGTGCTGAGTTGGCCAGGCGCACTGTTTCTCAGCTTCTTGGATTACCCATCGATCACGTCGTATGGGCCGACTTTACCG
GTTTTATGGCCGCGGTTGATGCAATCGGTGGCATCGAAGTTGAGCTGGCGCAACCAATCTATGACCCCCTGTATCCCACG
ATGGATTATGGCGTGACATCGGTTTACTTTCCGGCAGGAAAGCAGTGGCTTGATGGTGCTCAGGCGTTGATTTTGAGCCG
GACACGCCACGCTGATAGCGCTTATGCCCGTGAGGCGCGCCAGCAGATGATTTTGCTGGCGATTGCCCGACGGATTCGCG
AACAAGACCCCGTTCGCCAGGTCGAGCTGGCTGCACACGTTACCACTGCTCTACGTCCGCACATCCGAACCGATCTCAGT
GCAGACGATCTCCTGGGGCTGGTCTGGTCATTGCGGGATGTCAACCTGGCAAGTGTTGAACGCTTTGCGTTGGACGCGGA
TGGTGTGTTTGAGGGTCTGATCGAGGGTGATCCTTACGCACTGACGCCACGTCCTGGAGCGATTGAAGCCCTGGTACAGG
CGTTTGTTCGCGGGAAGTAA

Upstream 100 bases:

>100_bases
GTAAAAAGGTTTTATTGATCAAATATAGCCGCTAACAATGTGGTCTCCTTGCCAATAGTGATTACCGAACATTGCCAATC
GGTGATCAAGTGACTTACGT

Downstream 100 bases:

>100_bases
TACCTCACATATCTCATCTCCCAAAGGTTAAGGTCTCAAGCCAACACTAACGATCCCAGTATCACGTTAAGAGGATCGTC
AAAGGTGATTGGTGTCACTG

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MTCSEARALLAAGIRPGTASSTRLRLKAHLDHCSACRTLHDQTDHDLLLNLLTQPVVSEQSPSQRPWLRYVLIALLALFA
GWLGFQTGRVVWAAMTIRQNLEAMRLPTVVATPTPAMSVVAFTPLSSPQPLNVIQPTSVVPTAVSAAITPAITPTSIVRD
VTIAASATPIRLPGIDGRMPVPTLMPTVGVNLPSSDVIHILLLGSDRRPGEGWATRADAIMVVRIEMATRRVALLSLPRD
LIVAIPGYGYGRINSATVYGEQNPAIGGAELARRTVSQLLGLPIDHVVWADFTGFMAAVDAIGGIEVELAQPIYDPLYPT
MDYGVTSVYFPAGKQWLDGAQALILSRTRHADSAYAREARQQMILLAIARRIREQDPVRQVELAAHVTTALRPHIRTDLS
ADDLLGLVWSLRDVNLASVERFALDADGVFEGLIEGDPYALTPRPGAIEALVQAFVRGK

Sequences:

>Translated_459_residues
MTCSEARALLAAGIRPGTASSTRLRLKAHLDHCSACRTLHDQTDHDLLLNLLTQPVVSEQSPSQRPWLRYVLIALLALFA
GWLGFQTGRVVWAAMTIRQNLEAMRLPTVVATPTPAMSVVAFTPLSSPQPLNVIQPTSVVPTAVSAAITPAITPTSIVRD
VTIAASATPIRLPGIDGRMPVPTLMPTVGVNLPSSDVIHILLLGSDRRPGEGWATRADAIMVVRIEMATRRVALLSLPRD
LIVAIPGYGYGRINSATVYGEQNPAIGGAELARRTVSQLLGLPIDHVVWADFTGFMAAVDAIGGIEVELAQPIYDPLYPT
MDYGVTSVYFPAGKQWLDGAQALILSRTRHADSAYAREARQQMILLAIARRIREQDPVRQVELAAHVTTALRPHIRTDLS
ADDLLGLVWSLRDVNLASVERFALDADGVFEGLIEGDPYALTPRPGAIEALVQAFVRGK
>Mature_458_residues
TCSEARALLAAGIRPGTASSTRLRLKAHLDHCSACRTLHDQTDHDLLLNLLTQPVVSEQSPSQRPWLRYVLIALLALFAG
WLGFQTGRVVWAAMTIRQNLEAMRLPTVVATPTPAMSVVAFTPLSSPQPLNVIQPTSVVPTAVSAAITPAITPTSIVRDV
TIAASATPIRLPGIDGRMPVPTLMPTVGVNLPSSDVIHILLLGSDRRPGEGWATRADAIMVVRIEMATRRVALLSLPRDL
IVAIPGYGYGRINSATVYGEQNPAIGGAELARRTVSQLLGLPIDHVVWADFTGFMAAVDAIGGIEVELAQPIYDPLYPTM
DYGVTSVYFPAGKQWLDGAQALILSRTRHADSAYAREARQQMILLAIARRIREQDPVRQVELAAHVTTALRPHIRTDLSA
DDLLGLVWSLRDVNLASVERFALDADGVFEGLIEGDPYALTPRPGAIEALVQAFVRGK

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 49571; Mature: 49440

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCSEARALLAAGIRPGTASSTRLRLKAHLDHCSACRTLHDQTDHDLLLNLLTQPVVSEQ
CCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
SPSQRPWLRYVLIALLALFAGWLGFQTGRVVWAAMTIRQNLEAMRLPTVVATPTPAMSVV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCEEEECCCCCEEEE
AFTPLSSPQPLNVIQPTSVVPTAVSAAITPAITPTSIVRDVTIAASATPIRLPGIDGRMP
EECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHEEEEECCCCEECCCCCCCCC
VPTLMPTVGVNLPSSDVIHILLLGSDRRPGEGWATRADAIMVVRIEMATRRVALLSLPRD
CCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCH
LIVAIPGYGYGRINSATVYGEQNPAIGGAELARRTVSQLLGLPIDHVVWADFTGFMAAVD
HEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AIGGIEVELAQPIYDPLYPTMDYGVTSVYFPAGKQWLDGAQALILSRTRHADSAYAREAR
HCCCCEEEECCHHHHHCCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
QQMILLAIARRIREQDPVRQVELAAHVTTALRPHIRTDLSADDLLGLVWSLRDVNLASVE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCHHHHH
RFALDADGVFEGLIEGDPYALTPRPGAIEALVQAFVRGK
HHHCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TCSEARALLAAGIRPGTASSTRLRLKAHLDHCSACRTLHDQTDHDLLLNLLTQPVVSEQ
CHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
SPSQRPWLRYVLIALLALFAGWLGFQTGRVVWAAMTIRQNLEAMRLPTVVATPTPAMSVV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCEEEECCCCCEEEE
AFTPLSSPQPLNVIQPTSVVPTAVSAAITPAITPTSIVRDVTIAASATPIRLPGIDGRMP
EECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHEEEEECCCCEECCCCCCCCC
VPTLMPTVGVNLPSSDVIHILLLGSDRRPGEGWATRADAIMVVRIEMATRRVALLSLPRD
CCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCH
LIVAIPGYGYGRINSATVYGEQNPAIGGAELARRTVSQLLGLPIDHVVWADFTGFMAAVD
HEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AIGGIEVELAQPIYDPLYPTMDYGVTSVYFPAGKQWLDGAQALILSRTRHADSAYAREAR
HCCCCEEEECCHHHHHCCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
QQMILLAIARRIREQDPVRQVELAAHVTTALRPHIRTDLSADDLLGLVWSLRDVNLASVE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCHHHHH
RFALDADGVFEGLIEGDPYALTPRPGAIEALVQAFVRGK
HHHCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751 [H]