| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524945
Identifier: 222524945
GI number: 222524945
Start: 2122180
End: 2122974
Strand: Reverse
Name: 222524945
Synonym: Chy400_1680
Alternate gene names: NA
Gene position: 2122974-2122180 (Counterclockwise)
Preceding gene: 222524946
Following gene: 222524944
Centisome position: 40.29
GC content: 59.12
Gene sequence:
>795_bases ATGTCACTCACCTTTCAGATCAGCCATGCCGAGCTACTTTTGTTGCTTGGTCTACTCGAATTGCCCCGGCCTTTTGCGCT GGGGCCGAGTGTGTTGCCGGAGCGACCGGTGCTTGAAGGTGTACTCGGTGCGGCAGTTGGCAGTCTGGCAGCGCGTGACC TGTTGAAATTACCGGCCCAGCCTGATCACCTACCGACACCTGATGCCGGTCTGGCGACGTTATTGCGTACAGCGGCGCTC GCCGATAGTCTGATGATTGTCGCCAGCGGCCCACCCACACGTCTTAGCCATATCAGTCGCGCCGGCGCGAACTTTGTGTT GCACTCCAGCCCAGCGCCAGACATACATCGCTTTGCCGCACTTCCCGGTGCCGGGCATGTTATCGACACGATGCTGGCGA TGGTGATGCCGGAGAACATTCCTGAACCGGTCAGTACAGAGCCGCTCATGCTGGATGGTGAGGGATTGTTGACCGCGTTC AATGCTCTGCAACACGATGATCTTGATACCGCAGCACGTGTGTTTCAACGGCACGGCCATACTCCGGCGAAGGTGCGTCC ACTGATTGAGATGATTGGTCCCCAACCAACCCGCCACGCGCTGGCGGCGATCCGACAGTTGCGTCAGCCTGACTCAGAAG CTCGTGGGGCAATCATCGTTGCCGGACGGTATGGGGGCTGGTGGGTTGCGCCGGCATCTGATCGGGATGATCTGCTGGCG TTGTGGCCGACTGGTGGTCCGGGATTGCGGGCAAAAATGAGTGAGTTTGGAGCCTGGATCTGTGAGGCTGCATAA
Upstream 100 bases:
>100_bases GTCAAGTTTATGTGCGCTCCTGGGTCGGCCTCTCACCGGCTTTCCTCCCAATTGGTTGGTCCGATATATGGCCTGAACAA GAAGGAAACTGGAGCAGCGT
Downstream 100 bases:
>100_bases GTCATGAATACCGTTGCTGCTATTCCAGAGCATTTACGGCGCTTCGCGGTTGTAACAACCACCAGTCATGATCGTTTGCA CGCGGAAGCCGGGCGACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSLTFQISHAELLLLLGLLELPRPFALGPSVLPERPVLEGVLGAAVGSLAARDLLKLPAQPDHLPTPDAGLATLLRTAAL ADSLMIVASGPPTRLSHISRAGANFVLHSSPAPDIHRFAALPGAGHVIDTMLAMVMPENIPEPVSTEPLMLDGEGLLTAF NALQHDDLDTAARVFQRHGHTPAKVRPLIEMIGPQPTRHALAAIRQLRQPDSEARGAIIVAGRYGGWWVAPASDRDDLLA LWPTGGPGLRAKMSEFGAWICEAA
Sequences:
>Translated_264_residues MSLTFQISHAELLLLLGLLELPRPFALGPSVLPERPVLEGVLGAAVGSLAARDLLKLPAQPDHLPTPDAGLATLLRTAAL ADSLMIVASGPPTRLSHISRAGANFVLHSSPAPDIHRFAALPGAGHVIDTMLAMVMPENIPEPVSTEPLMLDGEGLLTAF NALQHDDLDTAARVFQRHGHTPAKVRPLIEMIGPQPTRHALAAIRQLRQPDSEARGAIIVAGRYGGWWVAPASDRDDLLA LWPTGGPGLRAKMSEFGAWICEAA >Mature_263_residues SLTFQISHAELLLLLGLLELPRPFALGPSVLPERPVLEGVLGAAVGSLAARDLLKLPAQPDHLPTPDAGLATLLRTAALA DSLMIVASGPPTRLSHISRAGANFVLHSSPAPDIHRFAALPGAGHVIDTMLAMVMPENIPEPVSTEPLMLDGEGLLTAFN ALQHDDLDTAARVFQRHGHTPAKVRPLIEMIGPQPTRHALAAIRQLRQPDSEARGAIIVAGRYGGWWVAPASDRDDLLAL WPTGGPGLRAKMSEFGAWICEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28007; Mature: 27876
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTFQISHAELLLLLGLLELPRPFALGPSVLPERPVLEGVLGAAVGSLAARDLLKLPAQ CCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PDHLPTPDAGLATLLRTAALADSLMIVASGPPTRLSHISRAGANFVLHSSPAPDIHRFAA CCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCCEEEECCCCCHHHHHHC LPGAGHVIDTMLAMVMPENIPEPVSTEPLMLDGEGLLTAFNALQHDDLDTAARVFQRHGH CCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCC TPAKVRPLIEMIGPQPTRHALAAIRQLRQPDSEARGAIIVAGRYGGWWVAPASDRDDLLA CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCEEEEEECCCCEEECCCCCCCCEEE LWPTGGPGLRAKMSEFGAWICEAA EECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SLTFQISHAELLLLLGLLELPRPFALGPSVLPERPVLEGVLGAAVGSLAARDLLKLPAQ CEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PDHLPTPDAGLATLLRTAALADSLMIVASGPPTRLSHISRAGANFVLHSSPAPDIHRFAA CCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHCCCCEEEECCCCCHHHHHHC LPGAGHVIDTMLAMVMPENIPEPVSTEPLMLDGEGLLTAFNALQHDDLDTAARVFQRHGH CCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCC TPAKVRPLIEMIGPQPTRHALAAIRQLRQPDSEARGAIIVAGRYGGWWVAPASDRDDLLA CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCEEEEEECCCCEEECCCCCCCCEEE LWPTGGPGLRAKMSEFGAWICEAA EECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA