| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524944
Identifier: 222524944
GI number: 222524944
Start: 2120164
End: 2122176
Strand: Reverse
Name: 222524944
Synonym: Chy400_1679
Alternate gene names: NA
Gene position: 2122176-2120164 (Counterclockwise)
Preceding gene: 222524945
Following gene: 222524943
Centisome position: 40.28
GC content: 56.04
Gene sequence:
>2013_bases ATGAATACCGTTGCTGCTATTCCAGAGCATTTACGGCGCTTCGCGGTTGTAACAACCACCAGTCATGATCGTTTGCACGC GGAAGCCGGGCGACTGGCCAATACCTTGCATTATTTCTCCGGCCAGTGTCGTGAATATACGGTTCCGCACCTTAACGGCC TCAGCGATGCCTTGTTTGCGCATTGCCGGGCGATTAACGAGATGGTTGAGTGGGTGCGCACAACCGCTGACCGCCTCGAA GTGGCTGATCGGGGGACACTCCGGCACCCCTCTTTTTGGGATGTAAGCACCGTCGCGCTCACCACATTCGGGACGGTTGC CCTGCGTCGTCTGACCTCGCTCAATGGGCCAGTGTTTGATATTGGAGCACGGGTAGCGTTTCGGGTGATATGGCAACTCC GCTCTCCACCATCGCTATCCCCCCATCACAAGACCGTGTTGCGAGTGGCTGCCTGCCTGGCAGCAGGCTGGATGGTGCAG AAGCTGCCGCCTTTACAACGCTGGTGGCTCAATCTGCTCTGGCCCGGCTCGCGTACTCTGGCGGTGCAGTCGTTCTTCTG GCGGGTATCGATCTACACTCCGCTTCTGCTTCCCTGGCAGCCGTTGCCAATAGCGATCCATCTGCTGGGGAGCACGTACC GCTTTGAGGCGGTTATTCACCATCTCCGGCAGGTCGAACGTGAGCTTGCGCCATCGCTGCGGACACTGGGATGGATGATG GTGTGGGAACCTGCGCTCTTCCGGTCAATTGTACACAGGCAGATCGCTGAGGTTACGCTTCGTGCATCCGCCTTCGCTGC CGATTTGCTCTGGCAACACTGGCAGCGACAGGTTCGCTACCATCTGACGCAACTGAGGCCATTTATTCCCAGCCAGGCCC AGATGTGGCGTCTGCTCAATCAGAGTATGATTTGGAACACCGATGTGATGTTACAGATGGGCTTCCAACAGCAATTTCTG TCAATCTTTTTGGCACAGTTCAGCGCTGCTGCAGGATTCAGTGCTGCTCCTCGTCTACCGGAAATAATCCAAAGTCCGAC AGACATTCTGGCGTTCACCGAGAGCGGCTTCTGGATTGATGCATTTCAGTATCTTACCCTTGCCGAAATGCGGGAACTGG CCATGAATCTGGAACAACTCGATGCTAAAGTCAGAAGGGATCTTCGGCTTTTGGTGTCGATCCGCCCTACCGCAGGCCCA GAGGCCGAGCCTGACGGTCAGGCAGCAGTCACCGACGTTTTTCCACCGCTGGAGGATCAGACCAACCCACAGCAACCGTA CCGGGTATCTCCAGCGGCATTGCAGGCAAATGCCCACGGCTTGATTAGCTCCTATTATGGCGAGGAGGTGCGGGCGGCTC AGGTGGGTAAGGACGAGTTTGCAATTGGCATTAACGGTCTCAGCCTTAACAACATGCCTGTTGGGACCAATGGTCTGGTT TCGGTGATCGATACCGCAGCGGGCAAGGAATATATCGAGCAGAACCGGTACTATCAGACGGTTATCGGACGTGTCTTGCG TTTGATCAACGAGTTGCCGGAAGGCAGTACGCTCCATCTAACCGGGCACAGTATGGGTGGTGGGATGTGTATTCTGCTGA GCAACGATCCGCGAGTGCAGGCAGCTCTGGCGCAGCGCAATATTCAGTTAGCCAGTGTGACCACGCAGGGGGCCGTGCGT CCGCAGGGCGAATGGGACGATGTGCCACCTGTGATCAACGGTCAACCGGTGACTGTACGTCACTACGTTGACAGCGATGA CAAACTGGCATTGTCGGTTGGGGCAGGGCACCAGGATGAGCAGTATCGCGATGCTGTATACATGCTGGACAATAACCGCA TCAATCAGCCGATGATTGTCCATAGTGCCTACCAGGATGCTGACTATACCCAATTACCGGAAACTGCCCAAACGCTGCCG TTTACGGTTGATCCGACCCACTTCCGCCTGGTAGAGATACCGCCACTGCCGTTTGATGAAGTTGATGTGGTTGTCGACCC GTTGTGGGCATGA
Upstream 100 bases:
>100_bases TGATCGGGATGATCTGCTGGCGTTGTGGCCGACTGGTGGTCCGGGATTGCGGGCAAAAATGAGTGAGTTTGGAGCCTGGA TCTGTGAGGCTGCATAAGTC
Downstream 100 bases:
>100_bases ATGATCCTGATCTGTGATTGTGTTGTGACGTAGTTCGAGTTATCCCACAAGGAGGTGCCTATGTCGGGACGCCCTGATGT CTGGTGGAACTGGCGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MNTVAAIPEHLRRFAVVTTTSHDRLHAEAGRLANTLHYFSGQCREYTVPHLNGLSDALFAHCRAINEMVEWVRTTADRLE VADRGTLRHPSFWDVSTVALTTFGTVALRRLTSLNGPVFDIGARVAFRVIWQLRSPPSLSPHHKTVLRVAACLAAGWMVQ KLPPLQRWWLNLLWPGSRTLAVQSFFWRVSIYTPLLLPWQPLPIAIHLLGSTYRFEAVIHHLRQVERELAPSLRTLGWMM VWEPALFRSIVHRQIAEVTLRASAFAADLLWQHWQRQVRYHLTQLRPFIPSQAQMWRLLNQSMIWNTDVMLQMGFQQQFL SIFLAQFSAAAGFSAAPRLPEIIQSPTDILAFTESGFWIDAFQYLTLAEMRELAMNLEQLDAKVRRDLRLLVSIRPTAGP EAEPDGQAAVTDVFPPLEDQTNPQQPYRVSPAALQANAHGLISSYYGEEVRAAQVGKDEFAIGINGLSLNNMPVGTNGLV SVIDTAAGKEYIEQNRYYQTVIGRVLRLINELPEGSTLHLTGHSMGGGMCILLSNDPRVQAALAQRNIQLASVTTQGAVR PQGEWDDVPPVINGQPVTVRHYVDSDDKLALSVGAGHQDEQYRDAVYMLDNNRINQPMIVHSAYQDADYTQLPETAQTLP FTVDPTHFRLVEIPPLPFDEVDVVVDPLWA
Sequences:
>Translated_670_residues MNTVAAIPEHLRRFAVVTTTSHDRLHAEAGRLANTLHYFSGQCREYTVPHLNGLSDALFAHCRAINEMVEWVRTTADRLE VADRGTLRHPSFWDVSTVALTTFGTVALRRLTSLNGPVFDIGARVAFRVIWQLRSPPSLSPHHKTVLRVAACLAAGWMVQ KLPPLQRWWLNLLWPGSRTLAVQSFFWRVSIYTPLLLPWQPLPIAIHLLGSTYRFEAVIHHLRQVERELAPSLRTLGWMM VWEPALFRSIVHRQIAEVTLRASAFAADLLWQHWQRQVRYHLTQLRPFIPSQAQMWRLLNQSMIWNTDVMLQMGFQQQFL SIFLAQFSAAAGFSAAPRLPEIIQSPTDILAFTESGFWIDAFQYLTLAEMRELAMNLEQLDAKVRRDLRLLVSIRPTAGP EAEPDGQAAVTDVFPPLEDQTNPQQPYRVSPAALQANAHGLISSYYGEEVRAAQVGKDEFAIGINGLSLNNMPVGTNGLV SVIDTAAGKEYIEQNRYYQTVIGRVLRLINELPEGSTLHLTGHSMGGGMCILLSNDPRVQAALAQRNIQLASVTTQGAVR PQGEWDDVPPVINGQPVTVRHYVDSDDKLALSVGAGHQDEQYRDAVYMLDNNRINQPMIVHSAYQDADYTQLPETAQTLP FTVDPTHFRLVEIPPLPFDEVDVVVDPLWA >Mature_670_residues MNTVAAIPEHLRRFAVVTTTSHDRLHAEAGRLANTLHYFSGQCREYTVPHLNGLSDALFAHCRAINEMVEWVRTTADRLE VADRGTLRHPSFWDVSTVALTTFGTVALRRLTSLNGPVFDIGARVAFRVIWQLRSPPSLSPHHKTVLRVAACLAAGWMVQ KLPPLQRWWLNLLWPGSRTLAVQSFFWRVSIYTPLLLPWQPLPIAIHLLGSTYRFEAVIHHLRQVERELAPSLRTLGWMM VWEPALFRSIVHRQIAEVTLRASAFAADLLWQHWQRQVRYHLTQLRPFIPSQAQMWRLLNQSMIWNTDVMLQMGFQQQFL SIFLAQFSAAAGFSAAPRLPEIIQSPTDILAFTESGFWIDAFQYLTLAEMRELAMNLEQLDAKVRRDLRLLVSIRPTAGP EAEPDGQAAVTDVFPPLEDQTNPQQPYRVSPAALQANAHGLISSYYGEEVRAAQVGKDEFAIGINGLSLNNMPVGTNGLV SVIDTAAGKEYIEQNRYYQTVIGRVLRLINELPEGSTLHLTGHSMGGGMCILLSNDPRVQAALAQRNIQLASVTTQGAVR PQGEWDDVPPVINGQPVTVRHYVDSDDKLALSVGAGHQDEQYRDAVYMLDNNRINQPMIVHSAYQDADYTQLPETAQTLP FTVDPTHFRLVEIPPLPFDEVDVVVDPLWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75401; Mature: 75401
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVAAIPEHLRRFAVVTTTSHDRLHAEAGRLANTLHYFSGQCREYTVPHLNGLSDALFA CCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH HCRAINEMVEWVRTTADRLEVADRGTLRHPSFWDVSTVALTTFGTVALRRLTSLNGPVFD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEH IGARVAFRVIWQLRSPPSLSPHHKTVLRVAACLAAGWMVQKLPPLQRWWLNLLWPGSRTL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE AVQSFFWRVSIYTPLLLPWQPLPIAIHLLGSTYRFEAVIHHLRQVERELAPSLRTLGWMM EHHHHHHEEEECCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH VWEPALFRSIVHRQIAEVTLRASAFAADLLWQHWQRQVRYHLTQLRPFIPSQAQMWRLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC QSMIWNTDVMLQMGFQQQFLSIFLAQFSAAAGFSAAPRLPEIIQSPTDILAFTESGFWID CHHCCCCHHHEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCCEEH AFQYLTLAEMRELAMNLEQLDAKVRRDLRLLVSIRPTAGPEAEPDGQAAVTDVFPPLEDQ HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEHHHCCCCCCCC TNPQQPYRVSPAALQANAHGLISSYYGEEVRAAQVGKDEFAIGINGLSLNNMPVGTNGLV CCCCCCCCCCHHHHCCCCCHHHHHHCCCHHHHHHCCCCCEEEEECCEEECCCCCCCCHHH SVIDTAAGKEYIEQNRYYQTVIGRVLRLINELPEGSTLHLTGHSMGGGMCILLSNDPRVQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCHH AALAQRNIQLASVTTQGAVRPQGEWDDVPPVINGQPVTVRHYVDSDDKLALSVGAGHQDE HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC QYRDAVYMLDNNRINQPMIVHSAYQDADYTQLPETAQTLPFTVDPTHFRLVEIPPLPFDE CCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHCCCEEECCCCEEEEEECCCCCCC VDVVVDPLWA CHHEECCCCC >Mature Secondary Structure MNTVAAIPEHLRRFAVVTTTSHDRLHAEAGRLANTLHYFSGQCREYTVPHLNGLSDALFA CCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH HCRAINEMVEWVRTTADRLEVADRGTLRHPSFWDVSTVALTTFGTVALRRLTSLNGPVFD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEH IGARVAFRVIWQLRSPPSLSPHHKTVLRVAACLAAGWMVQKLPPLQRWWLNLLWPGSRTL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCE AVQSFFWRVSIYTPLLLPWQPLPIAIHLLGSTYRFEAVIHHLRQVERELAPSLRTLGWMM EHHHHHHEEEECCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH VWEPALFRSIVHRQIAEVTLRASAFAADLLWQHWQRQVRYHLTQLRPFIPSQAQMWRLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC QSMIWNTDVMLQMGFQQQFLSIFLAQFSAAAGFSAAPRLPEIIQSPTDILAFTESGFWID CHHCCCCHHHEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCCEEH AFQYLTLAEMRELAMNLEQLDAKVRRDLRLLVSIRPTAGPEAEPDGQAAVTDVFPPLEDQ HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEHHHCCCCCCCC TNPQQPYRVSPAALQANAHGLISSYYGEEVRAAQVGKDEFAIGINGLSLNNMPVGTNGLV CCCCCCCCCCHHHHCCCCCHHHHHHCCCHHHHHHCCCCCEEEEECCEEECCCCCCCCHHH SVIDTAAGKEYIEQNRYYQTVIGRVLRLINELPEGSTLHLTGHSMGGGMCILLSNDPRVQ HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCCHH AALAQRNIQLASVTTQGAVRPQGEWDDVPPVINGQPVTVRHYVDSDDKLALSVGAGHQDE HHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC QYRDAVYMLDNNRINQPMIVHSAYQDADYTQLPETAQTLPFTVDPTHFRLVEIPPLPFDE CCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHCCCEEECCCCEEEEEECCCCCCC VDVVVDPLWA CHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA