| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524898
Identifier: 222524898
GI number: 222524898
Start: 2059631
End: 2060962
Strand: Reverse
Name: 222524898
Synonym: Chy400_1632
Alternate gene names: NA
Gene position: 2060962-2059631 (Counterclockwise)
Preceding gene: 222524899
Following gene: 222524896
Centisome position: 39.12
GC content: 54.2
Gene sequence:
>1332_bases ATGAATGACGAGATTGATTTAAGGCCATACCTGTCAGCGCTCTTACGTCGCTGGTGGATTATTCTCGGTACTGCCCTGGG GGTAGCATTGCTGGTAGGCGTGCTGGCCTGGATACGAACGCCTCCCCACACTGCCAGTACCTCGCTCCTCATCGTCCCGG CAAGTGCCCAGGTTACGCTCGATAATCGCTTCACCAGTCGCGACTCCCTGCTTTTCACTACGACCGTTAACCAACGTGAG GCATTGCTGGGACTGGCGCGTGATGCAACGCTTGAAGAACGAGTTGCGGCAATCCTGGAGAGCGAGGGAAGATTGCCAGA TGGGTATCAATTGGGCAATCTAAGCCAACGCATAACGATAGAAACCGATGGCGATCTGGTACGGATAACTGCGCGTGCTG ACACAGCCGATGATGCTCGCCGATTGGCGATTTTGTGGGGACAAGAGTATACACGGCTGGTGAACGAAACCTATACTAGA GATACCAGCTCGTTGGAACTGGTCGAACAACAACTGACCGAAGCCCGCGAACGTTATCAAATGGCTCAGGCCGAACTGGA AGCATTTATTGCTCAGGGTGAACTTGCCGCTGCCGAACAAGAAGTGCGCCGCCTGAGCGATCTGGTGAATAGCGCCCGTG CTGCGGGTACTGATCGTTTCGCTGATTACCTTCGGCGGGCGAATGATATTGAGCAAATCTTGCGCGATGCACAGCTCTTG CGGCAGCGGTTGGGCGATCAATCTGCCGACGAAGTCAATGTAGCAGATGCGTTAGCAGCATTGTTGCTCCGGATTCGCAA TCTGAGTGATCAGGGCAGTGATCGTCCTATCTTACAGCTCGACAGCTCGCTGACGGATAATGCCGTCGTGACCGTAGCCG ATCTTGACCGTTTAATCACTGCTCTTCGCGCTGAATATCAGGATGTGCGCAGCGAGGCTGAGCGGTTAAGTGAGCTACCA CCCAATGAGCTAAGCCCCGACTCGAGCCTGTCATTGTACAACCGTCTGGCCGCAGCGCAGACTCGTCTTGAACAACTAAA TGCTCGTCAGCGCGAATTGACTCGTAATCGCGATATTACGTTTGGGCTGATTGAAGTCCTGATGAGGCGTATCGATGAGT TACGAGTCGCAGATGCAGCCCCACAGGTCTCGGTACGCTATCTCGGTACGGTTACCAATCCTGTGGCAACGATAGGTCGT ACAGTGGCAACTCAGGCTGCAATTGGTGCCCTGGCCGGCATCTTCCTGGCAGCAGTCATCATTGTGGTACTTGAAGCAGT TGCGGTTGCCCGTCGTAATACTGCACTGACCCCAAAACCGGCTGGAGATTGA
Upstream 100 bases:
>100_bases TTAGTAACGTTCTACTATCTGCGTTGACGAAACCAGGTGGCCTCTGCTACAATCAGAAAGCCCGCCTGGTGAACAAAACA AACCTGTCAGGTCTATAGTT
Downstream 100 bases:
>100_bases GCGTTATTGTTTCGGTTGTTTAGCAAAGGTGAAGTGCATAGAGGAGCTAGCGGGTTAAAATCCTGCCTCAAGGCGTGCCA GCCCCTCCGGGGCTGGCCTT
Product: lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTLDNRFTSRDSLLFTTTVNQRE ALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITIETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTR DTSSLELVEQQLTEARERYQMAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLITALRAEYQDVRSEAERLSELP PNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDITFGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGR TVATQAAIGALAGIFLAAVIIVVLEAVAVARRNTALTPKPAGD
Sequences:
>Translated_443_residues MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTLDNRFTSRDSLLFTTTVNQRE ALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITIETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTR DTSSLELVEQQLTEARERYQMAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLITALRAEYQDVRSEAERLSELP PNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDITFGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGR TVATQAAIGALAGIFLAAVIIVVLEAVAVARRNTALTPKPAGD >Mature_443_residues MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTLDNRFTSRDSLLFTTTVNQRE ALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITIETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTR DTSSLELVEQQLTEARERYQMAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLITALRAEYQDVRSEAERLSELP PNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDITFGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGR TVATQAAIGALAGIFLAAVIIVVLEAVAVARRNTALTPKPAGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48867; Mature: 48867
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEE DNRFTSRDSLLFTTTVNQREALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITI CCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEE ETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTRDTSSLELVEQQLTEARERYQ EECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLIT HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHH ALRAEYQDVRSEAERLSELPPNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDIT HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGRTVATQAAIGALAGIFLAAVI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVVLEAVAVARRNTALTPKPAGD HHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEE DNRFTSRDSLLFTTTVNQREALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITI CCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEE ETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTRDTSSLELVEQQLTEARERYQ EECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLIT HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHH ALRAEYQDVRSEAERLSELPPNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDIT HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH FGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGRTVATQAAIGALAGIFLAAVI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVVLEAVAVARRNTALTPKPAGD HHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA