The gene/protein map for NC_012032 is currently unavailable.
Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524898

Identifier: 222524898

GI number: 222524898

Start: 2059631

End: 2060962

Strand: Reverse

Name: 222524898

Synonym: Chy400_1632

Alternate gene names: NA

Gene position: 2060962-2059631 (Counterclockwise)

Preceding gene: 222524899

Following gene: 222524896

Centisome position: 39.12

GC content: 54.2

Gene sequence:

>1332_bases
ATGAATGACGAGATTGATTTAAGGCCATACCTGTCAGCGCTCTTACGTCGCTGGTGGATTATTCTCGGTACTGCCCTGGG
GGTAGCATTGCTGGTAGGCGTGCTGGCCTGGATACGAACGCCTCCCCACACTGCCAGTACCTCGCTCCTCATCGTCCCGG
CAAGTGCCCAGGTTACGCTCGATAATCGCTTCACCAGTCGCGACTCCCTGCTTTTCACTACGACCGTTAACCAACGTGAG
GCATTGCTGGGACTGGCGCGTGATGCAACGCTTGAAGAACGAGTTGCGGCAATCCTGGAGAGCGAGGGAAGATTGCCAGA
TGGGTATCAATTGGGCAATCTAAGCCAACGCATAACGATAGAAACCGATGGCGATCTGGTACGGATAACTGCGCGTGCTG
ACACAGCCGATGATGCTCGCCGATTGGCGATTTTGTGGGGACAAGAGTATACACGGCTGGTGAACGAAACCTATACTAGA
GATACCAGCTCGTTGGAACTGGTCGAACAACAACTGACCGAAGCCCGCGAACGTTATCAAATGGCTCAGGCCGAACTGGA
AGCATTTATTGCTCAGGGTGAACTTGCCGCTGCCGAACAAGAAGTGCGCCGCCTGAGCGATCTGGTGAATAGCGCCCGTG
CTGCGGGTACTGATCGTTTCGCTGATTACCTTCGGCGGGCGAATGATATTGAGCAAATCTTGCGCGATGCACAGCTCTTG
CGGCAGCGGTTGGGCGATCAATCTGCCGACGAAGTCAATGTAGCAGATGCGTTAGCAGCATTGTTGCTCCGGATTCGCAA
TCTGAGTGATCAGGGCAGTGATCGTCCTATCTTACAGCTCGACAGCTCGCTGACGGATAATGCCGTCGTGACCGTAGCCG
ATCTTGACCGTTTAATCACTGCTCTTCGCGCTGAATATCAGGATGTGCGCAGCGAGGCTGAGCGGTTAAGTGAGCTACCA
CCCAATGAGCTAAGCCCCGACTCGAGCCTGTCATTGTACAACCGTCTGGCCGCAGCGCAGACTCGTCTTGAACAACTAAA
TGCTCGTCAGCGCGAATTGACTCGTAATCGCGATATTACGTTTGGGCTGATTGAAGTCCTGATGAGGCGTATCGATGAGT
TACGAGTCGCAGATGCAGCCCCACAGGTCTCGGTACGCTATCTCGGTACGGTTACCAATCCTGTGGCAACGATAGGTCGT
ACAGTGGCAACTCAGGCTGCAATTGGTGCCCTGGCCGGCATCTTCCTGGCAGCAGTCATCATTGTGGTACTTGAAGCAGT
TGCGGTTGCCCGTCGTAATACTGCACTGACCCCAAAACCGGCTGGAGATTGA

Upstream 100 bases:

>100_bases
TTAGTAACGTTCTACTATCTGCGTTGACGAAACCAGGTGGCCTCTGCTACAATCAGAAAGCCCGCCTGGTGAACAAAACA
AACCTGTCAGGTCTATAGTT

Downstream 100 bases:

>100_bases
GCGTTATTGTTTCGGTTGTTTAGCAAAGGTGAAGTGCATAGAGGAGCTAGCGGGTTAAAATCCTGCCTCAAGGCGTGCCA
GCCCCTCCGGGGCTGGCCTT

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTLDNRFTSRDSLLFTTTVNQRE
ALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITIETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTR
DTSSLELVEQQLTEARERYQMAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL
RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLITALRAEYQDVRSEAERLSELP
PNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDITFGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGR
TVATQAAIGALAGIFLAAVIIVVLEAVAVARRNTALTPKPAGD

Sequences:

>Translated_443_residues
MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTLDNRFTSRDSLLFTTTVNQRE
ALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITIETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTR
DTSSLELVEQQLTEARERYQMAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL
RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLITALRAEYQDVRSEAERLSELP
PNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDITFGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGR
TVATQAAIGALAGIFLAAVIIVVLEAVAVARRNTALTPKPAGD
>Mature_443_residues
MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTLDNRFTSRDSLLFTTTVNQRE
ALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITIETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTR
DTSSLELVEQQLTEARERYQMAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL
RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLITALRAEYQDVRSEAERLSELP
PNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDITFGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGR
TVATQAAIGALAGIFLAAVIIVVLEAVAVARRNTALTPKPAGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48867; Mature: 48867

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEE
DNRFTSRDSLLFTTTVNQREALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITI
CCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEE
ETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTRDTSSLELVEQQLTEARERYQ
EECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLIT
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHH
ALRAEYQDVRSEAERLSELPPNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDIT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGRTVATQAAIGALAGIFLAAVI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVVLEAVAVARRNTALTPKPAGD
HHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNDEIDLRPYLSALLRRWWIILGTALGVALLVGVLAWIRTPPHTASTSLLIVPASAQVTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEE
DNRFTSRDSLLFTTTVNQREALLGLARDATLEERVAAILESEGRLPDGYQLGNLSQRITI
CCCCCCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEEE
ETDGDLVRITARADTADDARRLAILWGQEYTRLVNETYTRDTSSLELVEQQLTEARERYQ
EECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MAQAELEAFIAQGELAAAEQEVRRLSDLVNSARAAGTDRFADYLRRANDIEQILRDAQLL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RQRLGDQSADEVNVADALAALLLRIRNLSDQGSDRPILQLDSSLTDNAVVTVADLDRLIT
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHHH
ALRAEYQDVRSEAERLSELPPNELSPDSSLSLYNRLAAAQTRLEQLNARQRELTRNRDIT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FGLIEVLMRRIDELRVADAAPQVSVRYLGTVTNPVATIGRTVATQAAIGALAGIFLAAVI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVVLEAVAVARRNTALTPKPAGD
HHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA