| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is cpsE [H]
Identifier: 222524871
GI number: 222524871
Start: 2030463
End: 2031206
Strand: Reverse
Name: cpsE [H]
Synonym: Chy400_1598
Alternate gene names: 222524871
Gene position: 2031206-2030463 (Counterclockwise)
Preceding gene: 222524874
Following gene: 222524870
Centisome position: 38.55
GC content: 52.02
Gene sequence:
>744_bases ATGAACGTTGTCAAACCGAAATCGCACCATCTTGATAATAAGACAGAGCGCATGCTCACCATCTTTGCCGAGCGTCGTTT TCAGCGCACCCGCGCCAATCAGCGTTTGCGACTGGCCTTATCGTGGTGGGTGATTCGTACCAAACTGCTCTCACGTCTTA AGCGAGTGTTGGATGTGACGGTTGCGGTGATTGCGATTATTTTGACGTCGCCAATCATGCTGATGACAGCACTGTTAATC AAACTCGAGTCACCGGGACCGGTGATCTTCAAACAGGTGCGTGTCGGCAAAGATGGCGAACATTTCTATTGTTATAAATT CCGCTCGATGTACGTTGATGCCGAGCAACGGCTGCGCGAATTGCAGGCCAAAAATGAAGCCGATGGCCCGGTATTCAAGA TGAAGCGCGACCCGCGTGTAACCCGAGTCGGTCGGGTGATCCGGAAGCTCAGTATCGACGAATTGCCACAACTCTTTAAC GTACTGAAAGGCGAGATGAGTCTGGTTGGGCCACGCCCTGCCTTACCGAGCGAAGTCGCGAAATATACCTATGAGCAGAT CGGGCGCCTGCACGCCATTCCTGGCATCACCGGTTTGCAACAGGTGTCAGGGCGAAGCGATCTCGACTTTAAGCGTTGGG TTGAGCTGGATTTGCAATATATTGCCGAGCAAAGCATCTGGAAGGATATTGAAATTCTGTTACGCACCATTCCGGCGGTT CTGCTGGGACGAGGTGCTTACTGA
Upstream 100 bases:
>100_bases GAGTGACATATTCTTCACTGATAACTCAATCGTTGTAAGGAATTTGTTCGTTCGATGGGGTATAGTGAGAGTGGTCACGA AACGAGTGAGGTACCCTGCT
Downstream 100 bases:
>100_bases CCGGGAAGAACACCATGCGCAAACTGCTCGTTATTCTGGGTGTGCCGATTGATAACTTGACCATGGCTGAGGCGCTTGAT CGCTGCGATGAGTTTATCGC
Product: undecaprenyl-phosphate galactose phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MNVVKPKSHHLDNKTERMLTIFAERRFQRTRANQRLRLALSWWVIRTKLLSRLKRVLDVTVAVIAIILTSPIMLMTALLI KLESPGPVIFKQVRVGKDGEHFYCYKFRSMYVDAEQRLRELQAKNEADGPVFKMKRDPRVTRVGRVIRKLSIDELPQLFN VLKGEMSLVGPRPALPSEVAKYTYEQIGRLHAIPGITGLQQVSGRSDLDFKRWVELDLQYIAEQSIWKDIEILLRTIPAV LLGRGAY
Sequences:
>Translated_247_residues MNVVKPKSHHLDNKTERMLTIFAERRFQRTRANQRLRLALSWWVIRTKLLSRLKRVLDVTVAVIAIILTSPIMLMTALLI KLESPGPVIFKQVRVGKDGEHFYCYKFRSMYVDAEQRLRELQAKNEADGPVFKMKRDPRVTRVGRVIRKLSIDELPQLFN VLKGEMSLVGPRPALPSEVAKYTYEQIGRLHAIPGITGLQQVSGRSDLDFKRWVELDLQYIAEQSIWKDIEILLRTIPAV LLGRGAY >Mature_247_residues MNVVKPKSHHLDNKTERMLTIFAERRFQRTRANQRLRLALSWWVIRTKLLSRLKRVLDVTVAVIAIILTSPIMLMTALLI KLESPGPVIFKQVRVGKDGEHFYCYKFRSMYVDAEQRLRELQAKNEADGPVFKMKRDPRVTRVGRVIRKLSIDELPQLFN VLKGEMSLVGPRPALPSEVAKYTYEQIGRLHAIPGITGLQQVSGRSDLDFKRWVELDLQYIAEQSIWKDIEILLRTIPAV LLGRGAY
Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=203, Percent_Identity=40.8866995073892, Blast_Score=144, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 28547; Mature: 28547
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVVKPKSHHLDNKTERMLTIFAERRFQRTRANQRLRLALSWWVIRTKLLSRLKRVLDVT CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVIAIILTSPIMLMTALLIKLESPGPVIFKQVRVGKDGEHFYCYKFRSMYVDAEQRLRE HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHH LQAKNEADGPVFKMKRDPRVTRVGRVIRKLSIDELPQLFNVLKGEMSLVGPRPALPSEVA HHHCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH KYTYEQIGRLHAIPGITGLQQVSGRSDLDFKRWVELDLQYIAEQSIWKDIEILLRTIPAV HHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGRGAY HHCCCCC >Mature Secondary Structure MNVVKPKSHHLDNKTERMLTIFAERRFQRTRANQRLRLALSWWVIRTKLLSRLKRVLDVT CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVIAIILTSPIMLMTALLIKLESPGPVIFKQVRVGKDGEHFYCYKFRSMYVDAEQRLRE HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHH LQAKNEADGPVFKMKRDPRVTRVGRVIRKLSIDELPQLFNVLKGEMSLVGPRPALPSEVA HHHCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH KYTYEQIGRLHAIPGITGLQQVSGRSDLDFKRWVELDLQYIAEQSIWKDIEILLRTIPAV HHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGRGAY HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8355611; 10913080; 11773119; 12354221 [H]