| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524840
Identifier: 222524840
GI number: 222524840
Start: 1994059
End: 1995762
Strand: Reverse
Name: 222524840
Synonym: Chy400_1567
Alternate gene names: NA
Gene position: 1995762-1994059 (Counterclockwise)
Preceding gene: 222524842
Following gene: 222524839
Centisome position: 37.88
GC content: 58.04
Gene sequence:
>1704_bases ATGTCGCGTCTACCCGTGATCTTCATCCCCGGCTTCACCGGTTCGTTCAACCTGCCGGTCCTGCTCGATTGGCGCGGTCC GACGTTAAATGGATGGAACTTTCCGCCATTTGTTGATTACGGGAAGACCTTCTTGCAAACCTTTACTCAGGCCGGTTATC GCCGTAATCGTGATCTCTTTGTGGCATTCTACGATTGGCGCAAACCGGTTGAAGAGAGCGCACGTCGCTACCTGATTGGA TGGATCGACAGGGCAAAGAAAGCAGCCAATGCCAGCAAGGTTATCCTCATCGGTCATAGTATGGGTGGTTTAGTTGCCCG CAGCTACATTCAGTCACCGGAATACCCTGCACGTAATGATGTAGCCCGCTTGATCACACTCGGCACCCCGCACCGCGGCT CGGCAGAAGCCTACACCGCCTGGGCCGGTGCAGAACCTCACGCCGATGAGACGCTGCGCACCGTTTTCGCCGTCTACCTG TGGTATTTGCGCCATATCCACCCTATCCAGACCGAACTCGACAAGGTGAAGACGATCCACACGCAGGTGCCCGGTGTGCG CGATTTACTGCCGGTGGAAGACTATCTGTTAAGTGGCAACCCTCCGCAATTCAAACCGCTGAGCAGTATGGTCTCCCGTA ATTTGTGGGGAGAGATGGCGAATCAGGTGACGGCAATTACCACGCTGACGCAGCGTGTTCCGGTGACCACCATTACCGGT GTCGGTTTTAATACGCTGAACACAATTCTGGTTGGGCCACCCCCAGACGATCATCCACTGCGCTACGCCGACGGTGTACC GCTTCAGCGCCACTACGATGCGCAGGGTGACGGCACTGTACTCCAACGCATGGCGACTGTGCCCCAGGCCAACAATCTCC CTGCAATTACGGTGAGCCACGGTGCGCTACCCGATAGTCCCCAAGCCCTGTCCTTAATCTTCCGAGAGCTGGGCATTGCC CCCGACGTGCTAGGCGCTGCTCCTACCCCAACACCATCCCCCACCCCACGGCTGATCATTATGACAGCTTCGCCGGTCGA GGTAGAGGTTGAGGTACCAGCCGGTCAACCACTGGCACCAGCCGGCGTGTTAGGTACCGGCGAAAAACGCGCAGCCCGTC GCAGTCGCCGGGTACGAGCACGAAATTATGGGCATGCGGGCAAGGCGCTCAATCTGGTCGTTATCGACAATCCAACCGCC GGTGATTATCGATTGATGTTACACGGTACCGACTACGGCCACGTTACGATTGGCGCTATGCTCACCGGTACAGGCGAACC GCCGGTGTTGGGTGGGGTCGGTTCGACAGCAGCGGCTGAACCAATGATCACCACCATCGAGAGTGAGGTTGCCCCCACGA CCGATCTATTCTACACCTGCACCGTCTTGAGCACCTCTGACATCCCCCAACTCCAGTTTGATGCCCGCAGCACCATGGCC GCGGCGGTAGACAGGCTCGGTACAGCGATGAGTGAACGCGGTGGTGTGTTGGGAGCGGCCCCCATCGGTGACGACCGACT GCGCAGTGTCCTCAGTGGCGAGCCAGCCGCAGTAGAGGCAATCATGGCTCTACCACCAGCCGAGCGCCATCAGGCCATTG ATCAGTTGATCGAGCTGTGCAAAGAAATGGTTGGCGATGACCGTGATCGGGCATTAGGGATGATCACAGCCTTGACTCAG GTGCGCAACGAGGTTGGTCGTTAG
Upstream 100 bases:
>100_bases TACGTCAAACATATCGGTCATATCGCAGACCTGCAATCTACCAGATCGCACAACAATCCCGTCTCCCCTCCGCGCAATGG AAGATGGACAAGGAGCCAGT
Downstream 100 bases:
>100_bases CGCAAGCGACTTCGCTTGCCGGGATGGGGGACACACCTGCGTTCGTCCATCATCTGTACTACGGTGTGGAGCAGGCTGGA AGCCAGCGCCACCACCCGCG
Product: PGAP1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MSRLPVIFIPGFTGSFNLPVLLDWRGPTLNGWNFPPFVDYGKTFLQTFTQAGYRRNRDLFVAFYDWRKPVEESARRYLIG WIDRAKKAANASKVILIGHSMGGLVARSYIQSPEYPARNDVARLITLGTPHRGSAEAYTAWAGAEPHADETLRTVFAVYL WYLRHIHPIQTELDKVKTIHTQVPGVRDLLPVEDYLLSGNPPQFKPLSSMVSRNLWGEMANQVTAITTLTQRVPVTTITG VGFNTLNTILVGPPPDDHPLRYADGVPLQRHYDAQGDGTVLQRMATVPQANNLPAITVSHGALPDSPQALSLIFRELGIA PDVLGAAPTPTPSPTPRLIIMTASPVEVEVEVPAGQPLAPAGVLGTGEKRAARRSRRVRARNYGHAGKALNLVVIDNPTA GDYRLMLHGTDYGHVTIGAMLTGTGEPPVLGGVGSTAAAEPMITTIESEVAPTTDLFYTCTVLSTSDIPQLQFDARSTMA AAVDRLGTAMSERGGVLGAAPIGDDRLRSVLSGEPAAVEAIMALPPAERHQAIDQLIELCKEMVGDDRDRALGMITALTQ VRNEVGR
Sequences:
>Translated_567_residues MSRLPVIFIPGFTGSFNLPVLLDWRGPTLNGWNFPPFVDYGKTFLQTFTQAGYRRNRDLFVAFYDWRKPVEESARRYLIG WIDRAKKAANASKVILIGHSMGGLVARSYIQSPEYPARNDVARLITLGTPHRGSAEAYTAWAGAEPHADETLRTVFAVYL WYLRHIHPIQTELDKVKTIHTQVPGVRDLLPVEDYLLSGNPPQFKPLSSMVSRNLWGEMANQVTAITTLTQRVPVTTITG VGFNTLNTILVGPPPDDHPLRYADGVPLQRHYDAQGDGTVLQRMATVPQANNLPAITVSHGALPDSPQALSLIFRELGIA PDVLGAAPTPTPSPTPRLIIMTASPVEVEVEVPAGQPLAPAGVLGTGEKRAARRSRRVRARNYGHAGKALNLVVIDNPTA GDYRLMLHGTDYGHVTIGAMLTGTGEPPVLGGVGSTAAAEPMITTIESEVAPTTDLFYTCTVLSTSDIPQLQFDARSTMA AAVDRLGTAMSERGGVLGAAPIGDDRLRSVLSGEPAAVEAIMALPPAERHQAIDQLIELCKEMVGDDRDRALGMITALTQ VRNEVGR >Mature_566_residues SRLPVIFIPGFTGSFNLPVLLDWRGPTLNGWNFPPFVDYGKTFLQTFTQAGYRRNRDLFVAFYDWRKPVEESARRYLIGW IDRAKKAANASKVILIGHSMGGLVARSYIQSPEYPARNDVARLITLGTPHRGSAEAYTAWAGAEPHADETLRTVFAVYLW YLRHIHPIQTELDKVKTIHTQVPGVRDLLPVEDYLLSGNPPQFKPLSSMVSRNLWGEMANQVTAITTLTQRVPVTTITGV GFNTLNTILVGPPPDDHPLRYADGVPLQRHYDAQGDGTVLQRMATVPQANNLPAITVSHGALPDSPQALSLIFRELGIAP DVLGAAPTPTPSPTPRLIIMTASPVEVEVEVPAGQPLAPAGVLGTGEKRAARRSRRVRARNYGHAGKALNLVVIDNPTAG DYRLMLHGTDYGHVTIGAMLTGTGEPPVLGGVGSTAAAEPMITTIESEVAPTTDLFYTCTVLSTSDIPQLQFDARSTMAA AVDRLGTAMSERGGVLGAAPIGDDRLRSVLSGEPAAVEAIMALPPAERHQAIDQLIELCKEMVGDDRDRALGMITALTQV RNEVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61371; Mature: 61240
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPVIFIPGFTGSFNLPVLLDWRGPTLNGWNFPPFVDYGKTFLQTFTQAGYRRNRDLF CCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE VAFYDWRKPVEESARRYLIGWIDRAKKAANASKVILIGHSMGGLVARSYIQSPEYPARND EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCHHC VARLITLGTPHRGSAEAYTAWAGAEPHADETLRTVFAVYLWYLRHIHPIQTELDKVKTIH HHHEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TQVPGVRDLLPVEDYLLSGNPPQFKPLSSMVSRNLWGEMANQVTAITTLTQRVPVTTITG HCCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC VGFNTLNTILVGPPPDDHPLRYADGVPLQRHYDAQGDGTVLQRMATVPQANNLPAITVSH CCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC GALPDSPQALSLIFRELGIAPDVLGAAPTPTPSPTPRLIIMTASPVEVEVEVPAGQPLAP CCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCC AGVLGTGEKRAARRSRRVRARNYGHAGKALNLVVIDNPTAGDYRLMLHGTDYGHVTIGAM CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEE LTGTGEPPVLGGVGSTAAAEPMITTIESEVAPTTDLFYTCTVLSTSDIPQLQFDARSTMA EECCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEHHHHHHHH AAVDRLGTAMSERGGVLGAAPIGDDRLRSVLSGEPAAVEAIMALPPAERHQAIDQLIELC HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHH KEMVGDDRDRALGMITALTQVRNEVGR HHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRLPVIFIPGFTGSFNLPVLLDWRGPTLNGWNFPPFVDYGKTFLQTFTQAGYRRNRDLF CCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE VAFYDWRKPVEESARRYLIGWIDRAKKAANASKVILIGHSMGGLVARSYIQSPEYPARND EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCHHC VARLITLGTPHRGSAEAYTAWAGAEPHADETLRTVFAVYLWYLRHIHPIQTELDKVKTIH HHHEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TQVPGVRDLLPVEDYLLSGNPPQFKPLSSMVSRNLWGEMANQVTAITTLTQRVPVTTITG HCCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC VGFNTLNTILVGPPPDDHPLRYADGVPLQRHYDAQGDGTVLQRMATVPQANNLPAITVSH CCCCCCCEEEECCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC GALPDSPQALSLIFRELGIAPDVLGAAPTPTPSPTPRLIIMTASPVEVEVEVPAGQPLAP CCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCC AGVLGTGEKRAARRSRRVRARNYGHAGKALNLVVIDNPTAGDYRLMLHGTDYGHVTIGAM CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEE LTGTGEPPVLGGVGSTAAAEPMITTIESEVAPTTDLFYTCTVLSTSDIPQLQFDARSTMA EECCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEHHHHHHHH AAVDRLGTAMSERGGVLGAAPIGDDRLRSVLSGEPAAVEAIMALPPAERHQAIDQLIELC HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHH KEMVGDDRDRALGMITALTQVRNEVGR HHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA