| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ada [H]
Identifier: 222524801
GI number: 222524801
Start: 1947408
End: 1947971
Strand: Reverse
Name: ada [H]
Synonym: Chy400_1528
Alternate gene names: 222524801
Gene position: 1947971-1947408 (Counterclockwise)
Preceding gene: 222524802
Following gene: 222524799
Centisome position: 36.97
GC content: 59.57
Gene sequence:
>564_bases ATGCCAAATCACGACTCTCAAGCACGAGATGATAAACGTGCTGCTCGTGTCAGACCGATACGAGAGGTTGCATATGCAGA TAGCCCCCTCGGTCGAGTGTTGGTAGCTGCGACCGATAGCGGTCTCTGTGCGGTCTATTTAGGTGATGATGACGCAGCAC TGCTGGCTACACTCCACGCTAGCTTTCCGGTAGCGGGCACTGCCGCTGGTGTTCTGGCGGAGACTGCGGCATCGGCAATT GCAGCCTATCTGCGCAACGAGGCACCGCTCCCCGCCTTCCCACTTGATCCAATTGGTACCCCCTTTCAACAACTGGTCTG GCAGGCGCTTTGTACGATCCCGCGTGGGAGCACCCGTACCTACGGTCAGCTAGCTCAGGAGTTAGGATTACCAACCGGCG CTGCACGGGCAGTCGGACGGGCCTGTGCGAGCAATTCACTGGCGATAGTGGTGCCCTGTCATCGTGCCCTGGGGAGCGAT GGCAGGCTCCATGGCTTTCGCTGGGGGATCGAGCGCAAGCGTGCGTTGCTGGCCCTTGAAGGGGTATTCCTGCCGCTTCT GTAG
Upstream 100 bases:
>100_bases TGGGCTTGTCTGGCAAACGATGGTTGAATACGTGCCAGAGACATATCGCACGGGGTTGCAGTCGGGTGATGCTGGCAATA GCTGATCGGAAGTTGCCCCC
Downstream 100 bases:
>100_bases TATCAAATCTGGTGCTACAGCGGTCATACATGCTGGTACCGCACCTGATCACAGAGGCGTGGAACCAGTGTAATCGCTGT ACGTGTCGTGGGATCACACG
Product: methylated-DNA/protein-cysteine methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPNHDSQARDDKRAARVRPIREVAYADSPLGRVLVAATDSGLCAVYLGDDDAALLATLHASFPVAGTAAGVLAETAASAI AAYLRNEAPLPAFPLDPIGTPFQQLVWQALCTIPRGSTRTYGQLAQELGLPTGAARAVGRACASNSLAIVVPCHRALGSD GRLHGFRWGIERKRALLALEGVFLPLL
Sequences:
>Translated_187_residues MPNHDSQARDDKRAARVRPIREVAYADSPLGRVLVAATDSGLCAVYLGDDDAALLATLHASFPVAGTAAGVLAETAASAI AAYLRNEAPLPAFPLDPIGTPFQQLVWQALCTIPRGSTRTYGQLAQELGLPTGAARAVGRACASNSLAIVVPCHRALGSD GRLHGFRWGIERKRALLALEGVFLPLL >Mature_186_residues PNHDSQARDDKRAARVRPIREVAYADSPLGRVLVAATDSGLCAVYLGDDDAALLATLHASFPVAGTAAGVLAETAASAIA AYLRNEAPLPAFPLDPIGTPFQQLVWQALCTIPRGSTRTYGQLAQELGLPTGAARAVGRACASNSLAIVVPCHRALGSDG RLHGFRWGIERKRALLALEGVFLPLL
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=162, Percent_Identity=30.2469135802469, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1788542, Length=159, Percent_Identity=49.685534591195, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1787596, Length=121, Percent_Identity=44.6280991735537, Blast_Score=95, Evalue=4e-21, Organism=Caenorhabditis elegans, GI115533068, Length=171, Percent_Identity=38.5964912280702, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI115533070, Length=131, Percent_Identity=40.4580152671756, Blast_Score=97, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6320001, Length=114, Percent_Identity=46.4912280701754, Blast_Score=102, Evalue=3e-23, Organism=Drosophila melanogaster, GI17137554, Length=89, Percent_Identity=48.314606741573, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 19647; Mature: 19516
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNHDSQARDDKRAARVRPIREVAYADSPLGRVLVAATDSGLCAVYLGDDDAALLATLHA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHH SFPVAGTAAGVLAETAASAIAAYLRNEAPLPAFPLDPIGTPFQQLVWQALCTIPRGSTRT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH YGQLAQELGLPTGAARAVGRACASNSLAIVVPCHRALGSDGRLHGFRWGIERKRALLALE HHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCHHHHCHHHHHHHHHHH GVFLPLL HHHHCCC >Mature Secondary Structure PNHDSQARDDKRAARVRPIREVAYADSPLGRVLVAATDSGLCAVYLGDDDAALLATLHA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHH SFPVAGTAAGVLAETAASAIAAYLRNEAPLPAFPLDPIGTPFQQLVWQALCTIPRGSTRT CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHH YGQLAQELGLPTGAARAVGRACASNSLAIVVPCHRALGSDGRLHGFRWGIERKRALLALE HHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCHHHHCHHHHHHHHHHH GVFLPLL HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]